RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 PAGE1O75459 146 aa8.28□□□□□ -1.08
SMC4-223ENST00000493695 LRRC14Q15048 493 aa8.28□□□□□ -1.08
SMC4-223ENST00000493695 ENOX2Q16206 610 aaKnown RBP8.28□□□□□ -1.08
SMC4-223ENST00000493695 LCE1DQ5T752 114 aa8.28□□□□□ -1.08
SMC4-223ENST00000493695 UBE3DQ7Z6J8 389 aa8.28□□□□□ -1.08
SMC4-223ENST00000493695 TNKS2Q9H2K2 1166 aa8.28□□□□□ -1.08
SMC4-223ENST00000493695 TPX2Q9ULW0 747 aaKnown RBP8.28□□□□□ -1.08
SMC4-223ENST00000493695 SUPT5HO00267 1087 aaKnown RBP8.27□□□□□ -1.09
SMC4-223ENST00000493695 TRIM37O94972 964 aa8.27□□□□□ -1.09
SMC4-223ENST00000493695 MPZL3Q6UWV2 235 aa8.27□□□□□ -1.09
SMC4-223ENST00000493695 SPACA3Q8IXA5 215 aa8.27□□□□□ -1.09
SMC4-223ENST00000493695 FOXQ1Q9C009 403 aa8.27□□□□□ -1.09
SMC4-223ENST00000493695 IGF2BP3O00425 579 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMC4-223ENST00000493695 ENC1O14682 589 aa8.26□□□□□ -1.09
SMC4-223ENST00000493695 FANCGO15287 622 aa8.26□□□□□ -1.09
SMC4-223ENST00000493695 BMP6P22004 513 aa8.26□□□□□ -1.09
SMC4-223ENST00000493695 ZBTB37Q5TC79 503 aa8.26□□□□□ -1.09
SMC4-223ENST00000493695 CDKAL1Q5VV42 579 aa8.26□□□□□ -1.09
SMC4-223ENST00000493695 ARMCX6Q7L4S7 300 aa8.26□□□□□ -1.09
SMC4-223ENST00000493695 KCT2Q8NC54 265 aa8.26□□□□□ -1.09
SMC4-223ENST00000493695 C3orf58Q8NDZ4 430 aa8.26□□□□□ -1.09
SMC4-223ENST00000493695 FLAD1Q8NFF5 587 aa8.26□□□□□ -1.09
SMC4-223ENST00000493695 FAM84AQ96KN4 292 aa8.26□□□□□ -1.09
SMC4-223ENST00000493695 FAM53CQ9NYF3 392 aa8.26□□□□□ -1.09
SMC4-223ENST00000493695 TREHO43280 583 aa8.25□□□□□ -1.09
SMC4-223ENST00000493695 CARS2Q9HA77 564 aaKnown RBP8.25□□□□□ -1.09
SMC4-223ENST00000493695 AFMP43652 599 aa8.24□□□□□ -1.09
SMC4-223ENST00000493695 CLCN7P51798 805 aa8.24□□□□□ -1.09
SMC4-223ENST00000493695 ATP2B2Q01814 1243 aa8.24□□□□□ -1.09
SMC4-223ENST00000493695 DSC3Q14574 896 aa8.24□□□□□ -1.09
SMC4-223ENST00000493695 NKPD1Q17RQ9 610 aa8.24□□□□□ -1.09
SMC4-223ENST00000493695 ZNF507Q8TCN5 953 aa8.24□□□□□ -1.09
SMC4-223ENST00000493695 LIN37Q96GY3 246 aaPredicted RBP8.24□□□□□ -1.09
SMC4-223ENST00000493695 SRCIN1Q9C0H9 1055 aa8.24□□□□□ -1.09
SMC4-223ENST00000493695 ETF1P62495 437 aaKnown RBP8.23□□□□□ -1.09
SMC4-223ENST00000493695 PCNX4Q63HM2 1172 aa8.23□□□□□ -1.09
SMC4-223ENST00000493695 FAM214BQ7L5A3 538 aa8.23□□□□□ -1.09
SMC4-223ENST00000493695 HSPA12BQ96MM6 686 aa8.23□□□□□ -1.09
SMC4-223ENST00000493695 SETDB2Q96T68 719 aa8.23□□□□□ -1.09
SMC4-223ENST00000493695 MIPEPQ99797 713 aa8.23□□□□□ -1.09
SMC4-223ENST00000493695 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMC4-223ENST00000493695 CTNND2Q9UQB3 1225 aa8.23□□□□□ -1.09
SMC4-223ENST00000493695 LRIG2O94898 1065 aa8.22□□□□□ -1.09
SMC4-223ENST00000493695 EOMESO95936 686 aa8.22□□□□□ -1.09
SMC4-223ENST00000493695 CELA3AP09093 270 aa8.22□□□□□ -1.09
SMC4-223ENST00000493695 LMNB1P20700 586 aa8.22□□□□□ -1.09
SMC4-223ENST00000493695 NTF4P34130 210 aa8.22□□□□□ -1.09
SMC4-223ENST00000493695 RAP1GAPP47736 663 aa8.22□□□□□ -1.09
SMC4-223ENST00000493695 ZSCAN29Q8IWY8 852 aaPredicted RBP8.22□□□□□ -1.09
SMC4-223ENST00000493695 OSBPL7Q9BZF2 842 aa8.22□□□□□ -1.09
SMC4-223ENST00000493695 ATP13A1Q9HD20 1204 aa8.22□□□□□ -1.09
SMC4-223ENST00000493695 PPM1HQ9ULR3 514 aa8.22□□□□□ -1.09
SMC4-223ENST00000493695 SPG7Q9UQ90 795 aa8.22□□□□□ -1.09
SMC4-223ENST00000493695 MAPK8IP1Q9UQF2 711 aa8.22□□□□□ -1.09
SMC4-223ENST00000493695 PITPNM2Q9BZ72 1349 aa8.22□□□□□ -1.09
SMC4-223ENST00000493695 ZNF503-AS2A6NEH8 195 aa8.21□□□□□ -1.1
SMC4-223ENST00000493695 H3BS24 57 aa8.21□□□□□ -1.1
SMC4-223ENST00000493695 CBX7O95931 251 aa8.21□□□□□ -1.1
SMC4-223ENST00000493695 FGD1P98174 961 aa8.21□□□□□ -1.1
SMC4-223ENST00000493695 INPP5AQ14642 412 aa8.21□□□□□ -1.1
SMC4-223ENST00000493695 SFRP5Q5T4F7 317 aa8.21□□□□□ -1.1
SMC4-223ENST00000493695 RASIP1Q5U651 963 aa8.21□□□□□ -1.1
SMC4-223ENST00000493695 FYB2Q5VWT5 728 aa8.21□□□□□ -1.1
SMC4-223ENST00000493695 CYFIP1Q7L576 1253 aa8.21□□□□□ -1.1
SMC4-223ENST00000493695 HDXQ7Z353 690 aa8.21□□□□□ -1.1
SMC4-223ENST00000493695 MFSD4AQ8N468 514 aa8.21□□□□□ -1.1
SMC4-223ENST00000493695 FBF1Q8TES7 1133 aa8.21□□□□□ -1.1
SMC4-223ENST00000493695 XAGE3Q8WTP9 111 aa8.21□□□□□ -1.1
SMC4-223ENST00000493695 KIRREL1Q96J84 757 aa8.21□□□□□ -1.1
SMC4-223ENST00000493695 CYP8B1Q9UNU6 501 aa8.21□□□□□ -1.1
SMC4-223ENST00000493695 TTF2Q9UNY4 1162 aaKnown RBP8.21□□□□□ -1.1
SMC4-223ENST00000493695 TMEM67Q5HYA8 995 aa8.2□□□□□ -1.1
SMC4-223ENST00000493695 ALG1LQ6GMV1 187 aa8.2□□□□□ -1.1
SMC4-223ENST00000493695 LRFN4Q6PJG9 635 aa8.2□□□□□ -1.1
SMC4-223ENST00000493695 CACNA2D2Q9NY47 1150 aa8.2□□□□□ -1.1
SMC4-223ENST00000493695 WWC3Q9ULE0 1092 aa8.2□□□□□ -1.1
SMC4-223ENST00000493695 PRR33A8MZF0 331 aa8.19□□□□□ -1.1
SMC4-223ENST00000493695 SLITRK5O94991 958 aa8.19□□□□□ -1.1
SMC4-223ENST00000493695 RING1Q06587 406 aa8.19□□□□□ -1.1
SMC4-223ENST00000493695 MESP2Q0VG99 397 aa8.19□□□□□ -1.1
SMC4-223ENST00000493695 PLPPR2Q96GM1 343 aa8.19□□□□□ -1.1
SMC4-223ENST00000493695 KRTAP4-7Q9BYR0 210 aa8.19□□□□□ -1.1
SMC4-223ENST00000493695 FBRSQ9HAH7 460 aa8.19□□□□□ -1.1
SMC4-223ENST00000493695 LMCD1Q9NZU5 365 aa8.19□□□□□ -1.1
SMC4-223ENST00000493695 GIPC1O14908 333 aa8.18□□□□□ -1.1
SMC4-223ENST00000493695 USP17L7P0C7H9 530 aa8.18□□□□□ -1.1
SMC4-223ENST00000493695 FBLN7Q53RD9 439 aa8.18□□□□□ -1.1
SMC4-223ENST00000493695 PRR23BQ6ZRT6 265 aa8.18□□□□□ -1.1
SMC4-223ENST00000493695 SYDE1Q6ZW31 735 aaPredicted RBP8.18□□□□□ -1.1
SMC4-223ENST00000493695 TOX2Q96NM4 488 aa8.18□□□□□ -1.1
SMC4-223ENST00000493695 GNEQ9Y223 722 aaKnown RBP8.18□□□□□ -1.1
SMC4-223ENST00000493695 BRD1O95696 1058 aa8.17□□□□□ -1.1
SMC4-223ENST00000493695 GLI1P08151 1106 aa8.17□□□□□ -1.1
SMC4-223ENST00000493695 PTPN11Q06124 597 aaPredicted RBP8.17□□□□□ -1.1
SMC4-223ENST00000493695 WIPI1Q5MNZ9 446 aaPredicted RBP8.17□□□□□ -1.1
SMC4-223ENST00000493695 NPAS4Q8IUM7 802 aa8.17□□□□□ -1.1
SMC4-223ENST00000493695 DIRC2Q96SL1 478 aa8.17□□□□□ -1.1
SMC4-223ENST00000493695 PPP1R16BQ96T49 567 aa8.17□□□□□ -1.1
SMC4-223ENST00000493695 ZSWIM5Q9P217 1185 aa8.17□□□□□ -1.1
SMC4-223ENST00000493695 FAM8A1Q9UBU6 413 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms