RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 ERICH6BQ5W0A0 696 aa13.99□□□□□ -0.17
CTSA-209ENST00000493522 ZSCAN25Q6NSZ9 544 aa13.99□□□□□ -0.17
CTSA-209ENST00000493522 TMED8Q6PL24 325 aaPredicted RBP13.99□□□□□ -0.17
CTSA-209ENST00000493522 TEX11Q8IYF3 940 aa13.99□□□□□ -0.17
CTSA-209ENST00000493522 SH3RF3Q8TEJ3 882 aaPredicted RBP13.99□□□□□ -0.17
CTSA-209ENST00000493522 TMEM39BQ9GZU3 492 aa13.99□□□□□ -0.17
CTSA-209ENST00000493522 ELP3Q9H9T3 547 aa13.99□□□□□ -0.17
CTSA-209ENST00000493522 POTEFA5A3E0 1075 aa13.98□□□□□ -0.17
CTSA-209ENST00000493522 TRIM6-TRIM34B2RNG4 842 aa13.98□□□□□ -0.17
CTSA-209ENST00000493522 RGS3P49796 1198 aa13.98□□□□□ -0.17
CTSA-209ENST00000493522 RHBDL3P58872 404 aa13.98□□□□□ -0.17
CTSA-209ENST00000493522 ARHGEF6Q15052 776 aa13.98□□□□□ -0.17
CTSA-209ENST00000493522 FAM83AQ86UY5 434 aa13.98□□□□□ -0.17
CTSA-209ENST00000493522 ARMC5Q96C12 935 aa13.98□□□□□ -0.17
CTSA-209ENST00000493522 PTPN18Q99952 460 aa13.98□□□□□ -0.17
CTSA-209ENST00000493522 PPP4R2Q9NY27 417 aa13.98□□□□□ -0.17
CTSA-209ENST00000493522 MAGEB6P1A0A0J9YX57 407 aa13.97□□□□□ -0.17
CTSA-209ENST00000493522 TCRBV5S4A2TA0A5A2 114 aa13.97□□□□□ -0.17
CTSA-209ENST00000493522 WDHD1O75717 1129 aaPredicted RBP13.97□□□□□ -0.17
CTSA-209ENST00000493522 CHGBP05060 677 aa13.97□□□□□ -0.17
CTSA-209ENST00000493522 PPP4CP60510 307 aa13.97□□□□□ -0.17
CTSA-209ENST00000493522 LRRFIP1Q32MZ4 808 aaKnown RBP13.97□□□□□ -0.17
CTSA-209ENST00000493522 SLFNL1Q499Z3 407 aa13.97□□□□□ -0.17
CTSA-209ENST00000493522 CERS3Q8IU89 383 aa13.97□□□□□ -0.17
CTSA-209ENST00000493522 CDAN1Q8IWY9 1227 aa13.97□□□□□ -0.17
CTSA-209ENST00000493522 EVI5LQ96CN4 794 aa13.97□□□□□ -0.17
CTSA-209ENST00000493522 IDI2Q9BXS1 227 aa13.97□□□□□ -0.17
CTSA-209ENST00000493522 OSBPL3Q9H4L5 887 aa13.97□□□□□ -0.17
CTSA-209ENST00000493522 FAM198AQ9UFP1 575 aa13.97□□□□□ -0.17
CTSA-209ENST00000493522 CSADQ9Y600 493 aa13.97□□□□□ -0.17
CTSA-209ENST00000493522 COL2A1P02458 1487 aaPredicted RBP13.97□□□□□ -0.17
CTSA-209ENST00000493522 ENTPD3O75355 529 aa13.96□□□□□ -0.17
CTSA-209ENST00000493522 MBD4O95243 580 aa13.96□□□□□ -0.17
CTSA-209ENST00000493522 GTF2A2P52657 109 aa13.96□□□□□ -0.17
CTSA-209ENST00000493522 VGLL4Q14135 290 aa13.96□□□□□ -0.17
CTSA-209ENST00000493522 UBE3CQ15386 1083 aa13.96□□□□□ -0.17
CTSA-209ENST00000493522 ZSCAN29Q8IWY8 852 aaPredicted RBP13.96□□□□□ -0.17
CTSA-209ENST00000493522 FAM151AQ8WW52 585 aa13.96□□□□□ -0.17
CTSA-209ENST00000493522 RILPL2Q969X0 211 aa13.96□□□□□ -0.17
CTSA-209ENST00000493522 MS4A4AQ96JQ5 239 aa13.96□□□□□ -0.17
CTSA-209ENST00000493522 TEPSINQ96N21 525 aa13.96□□□□□ -0.17
CTSA-209ENST00000493522 TMEM106CQ9BVX2 250 aa13.96□□□□□ -0.17
CTSA-209ENST00000493522 ZFYVE28Q9HCC9 887 aa13.96□□□□□ -0.17
CTSA-209ENST00000493522 DDX4Q9NQI0 724 aaKnown RBP13.96□□□□□ -0.17
CTSA-209ENST00000493522 KIAA0100Q14667 2235 aaKnown RBP13.96□□□□□ -0.17
CTSA-209ENST00000493522 CCL15-CCL14A0A0B4J2E2 113 aa13.95□□□□□ -0.18
CTSA-209ENST00000493522 RNF113AO15541 343 aaKnown RBP13.95□□□□□ -0.18
CTSA-209ENST00000493522 ZFYP08048 801 aaPredicted RBP13.95□□□□□ -0.18
CTSA-209ENST00000493522 USP5P45974 858 aa13.95□□□□□ -0.18
CTSA-209ENST00000493522 MAP3K9P80192 1104 aa13.95□□□□□ -0.18
CTSA-209ENST00000493522 TAF1CQ15572 869 aaPredicted RBP13.95□□□□□ -0.18
CTSA-209ENST00000493522 CCL15Q16663 113 aa13.95□□□□□ -0.18
CTSA-209ENST00000493522 TTC22Q5TAA0 569 aa13.95□□□□□ -0.18
CTSA-209ENST00000493522 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.95□□□□□ -0.18
CTSA-209ENST00000493522 NBPF11Q86T75 865 aa13.95□□□□□ -0.18
CTSA-209ENST00000493522 MAPKAPK5Q8IW41 473 aa13.95□□□□□ -0.18
CTSA-209ENST00000493522 LCORLQ8N3X6 602 aa13.95□□□□□ -0.18
CTSA-209ENST00000493522 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.95□□□□□ -0.18
CTSA-209ENST00000493522 TGFBRAP1Q8WUH2 860 aa13.95□□□□□ -0.18
CTSA-209ENST00000493522 BRI3BPQ8WY22 251 aa13.95□□□□□ -0.18
CTSA-209ENST00000493522 APPBP2Q92624 585 aa13.95□□□□□ -0.18
CTSA-209ENST00000493522 RIOK1Q9BRS2 568 aaKnown RBP13.95□□□□□ -0.18
CTSA-209ENST00000493522 CRNKL1Q9BZJ0 848 aaKnown RBP13.95□□□□□ -0.18
CTSA-209ENST00000493522 ARMT1Q9H993 441 aa13.95□□□□□ -0.18
CTSA-209ENST00000493522 RBBP6Q7Z6E9 1792 aaKnown RBP13.95□□□□□ -0.18
CTSA-209ENST00000493522 LAMA4Q16363 1823 aa13.94□□□□□ -0.18
CTSA-209ENST00000493522 FLT1P17948 1338 aa13.94□□□□□ -0.18
CTSA-209ENST00000493522 SLC9C1Q4G0N8 1177 aa13.94□□□□□ -0.18
CTSA-209ENST00000493522 SKAP1Q86WV1 359 aa13.94□□□□□ -0.18
CTSA-209ENST00000493522 ZFPM1Q8IX07 1006 aa13.94□□□□□ -0.18
CTSA-209ENST00000493522 HOOK2Q96ED9 719 aa13.94□□□□□ -0.18
CTSA-209ENST00000493522 OTUD5Q96G74 571 aa13.94□□□□□ -0.18
CTSA-209ENST00000493522 OSBPL5Q9H0X9 879 aaPredicted RBP13.94□□□□□ -0.18
CTSA-209ENST00000493522 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
CTSA-209ENST00000493522 EN2P19622 333 aaPredicted RBP13.93□□□□□ -0.18
CTSA-209ENST00000493522 HABP4Q5JVS0 413 aaKnown RBP13.93□□□□□ -0.18
CTSA-209ENST00000493522 ZNF333Q96JL9 665 aa13.93□□□□□ -0.18
CTSA-209ENST00000493522 PUS7LQ9H0K6 701 aaKnown RBP13.93□□□□□ -0.18
CTSA-209ENST00000493522 ATRNL1Q5VV63 1379 aa13.93□□□□□ -0.18
CTSA-209ENST00000493522 PTPRFP10586 1907 aa13.92□□□□□ -0.18
CTSA-209ENST00000493522 SPDYE5A6NIY4 337 aa13.92□□□□□ -0.18
CTSA-209ENST00000493522 M0R2C6 588 aa13.92□□□□□ -0.18
CTSA-209ENST00000493522 GSPT1P15170 499 aaKnown RBP13.92□□□□□ -0.18
CTSA-209ENST00000493522 SLC4A8Q2Y0W8 1093 aa13.92□□□□□ -0.18
CTSA-209ENST00000493522 DCAF15Q66K64 600 aa13.92□□□□□ -0.18
CTSA-209ENST00000493522 FAM43AQ8N2R8 423 aa13.92□□□□□ -0.18
CTSA-209ENST00000493522 SDR42E1Q8WUS8 393 aa13.92□□□□□ -0.18
CTSA-209ENST00000493522 ZCCHC17Q9NP64 241 aaKnown RBP13.92□□□□□ -0.18
CTSA-209ENST00000493522 SAP30BPQ9UHR5 308 aaKnown RBP13.92□□□□□ -0.18
CTSA-209ENST00000493522 PHIPQ8WWQ0 1821 aa13.92□□□□□ -0.18
CTSA-209ENST00000493522 DDTLA6NHG4 134 aaPredicted RBP13.91□□□□□ -0.18
CTSA-209ENST00000493522 GPAA1O43292 621 aa13.91□□□□□ -0.18
CTSA-209ENST00000493522 CETPP11597 493 aa13.91□□□□□ -0.18
CTSA-209ENST00000493522 CAP1Q01518 475 aa13.91□□□□□ -0.18
CTSA-209ENST00000493522 KIF22Q14807 665 aa13.91□□□□□ -0.18
CTSA-209ENST00000493522 ZMYM1Q5SVZ6 1142 aa13.91□□□□□ -0.18
CTSA-209ENST00000493522 SH3BP5LQ7L8J4 393 aa13.91□□□□□ -0.18
CTSA-209ENST00000493522 ERO1BQ86YB8 467 aa13.91□□□□□ -0.18
CTSA-209ENST00000493522 OSBP2Q969R2 916 aa13.91□□□□□ -0.18
CTSA-209ENST00000493522 WRNIP1Q96S55 665 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms