RNA–Protein interactions for RNA: ENST00000493288.1

PGD-208, Transcript of phosphogluconate dehydrogenase, human

TSL 3

Gene PGD, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGD-208	ENST00000493288	KIF4B	Q2VIQ3	1234 aa		13.48	□□□□□ -0.25
PGD-208	ENST00000493288	SPDYE2	Q495Y8	402 aa		13.48	□□□□□ -0.25
PGD-208	ENST00000493288	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.48	□□□□□ -0.25
PGD-208	ENST00000493288	FKBP1C	Q5VVH2	108 aa		13.48	□□□□□ -0.25
PGD-208	ENST00000493288	TMEM87B	Q96K49	555 aa		13.48	□□□□□ -0.25
PGD-208	ENST00000493288	TCEANC2	Q96MN5	208 aa		13.48	□□□□□ -0.25
PGD-208	ENST00000493288	INCENP	Q9NQS7	918 aa		13.48	□□□□□ -0.25
PGD-208	ENST00000493288	FAM198A	Q9UFP1	575 aa		13.48	□□□□□ -0.25
PGD-208	ENST00000493288	SHTN1	A0MZ66	631 aa		13.47	□□□□□ -0.25
PGD-208	ENST00000493288	FGR	P09769	529 aa		13.47	□□□□□ -0.25
PGD-208	ENST00000493288	SLC4A3	P48751	1232 aa		13.47	□□□□□ -0.25
PGD-208	ENST00000493288	TNFAIP1	Q13829	316 aa		13.47	□□□□□ -0.25
PGD-208	ENST00000493288	NBPF9	Q3BBW0	867 aa		13.47	□□□□□ -0.25
PGD-208	ENST00000493288	CHST3	Q7LGC8	479 aa		13.47	□□□□□ -0.25
PGD-208	ENST00000493288	SAMD7	Q7Z3H4	446 aa		13.47	□□□□□ -0.25
PGD-208	ENST00000493288	IQCA1	Q86XH1	822 aa		13.47	□□□□□ -0.25
PGD-208	ENST00000493288	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.47	□□□□□ -0.25
PGD-208	ENST00000493288	FAM151A	Q8WW52	585 aa		13.47	□□□□□ -0.25
PGD-208	ENST00000493288	DYNLL2	Q96FJ2	89 aa		13.47	□□□□□ -0.25
PGD-208	ENST00000493288	ZBED3	Q96IU2	234 aa	Predicted RBP	13.47	□□□□□ -0.25
PGD-208	ENST00000493288	UBAC1	Q9BSL1	405 aa		13.47	□□□□□ -0.25
PGD-208	ENST00000493288	LRRC2	Q9BYS8	371 aa		13.47	□□□□□ -0.25
PGD-208	ENST00000493288	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.47	□□□□□ -0.25
PGD-208	ENST00000493288	ZSWIM5	Q9P217	1185 aa		13.47	□□□□□ -0.25
PGD-208	ENST00000493288	PI4KB	Q9UBF8	816 aa		13.47	□□□□□ -0.25
PGD-208	ENST00000493288	SWAP70	Q9UH65	585 aa		13.47	□□□□□ -0.25
PGD-208	ENST00000493288	TAOK2	Q9UL54	1235 aa		13.47	□□□□□ -0.25
PGD-208	ENST00000493288	ROBO3	Q96MS0	1386 aa		13.46	□□□□□ -0.25
PGD-208	ENST00000493288	ZNF646	O15015	1829 aa	Predicted RBP	13.46	□□□□□ -0.25
PGD-208	ENST00000493288	TSPY2	A6NKD2	308 aa		13.46	□□□□□ -0.25
PGD-208	ENST00000493288	IFIT3	O14879	490 aa	Known RBP	13.46	□□□□□ -0.25
PGD-208	ENST00000493288	PRDM1	O75626	825 aa		13.46	□□□□□ -0.25
PGD-208	ENST00000493288	C16orf86	Q6ZW13	317 aa		13.46	□□□□□ -0.25
PGD-208	ENST00000493288	CYB5R4	Q7L1T6	521 aa		13.46	□□□□□ -0.25
PGD-208	ENST00000493288	FAM83A	Q86UY5	434 aa		13.46	□□□□□ -0.25
PGD-208	ENST00000493288	BRF1	Q92994	677 aa		13.46	□□□□□ -0.25
PGD-208	ENST00000493288	MTA3	Q9BTC8	594 aa		13.46	□□□□□ -0.25
PGD-208	ENST00000493288	SERPINB13	Q9UIV8	391 aa		13.46	□□□□□ -0.25
PGD-208	ENST00000493288	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
PGD-208	ENST00000493288	SMIM22	K7EJ46	135 aa		13.45	□□□□□ -0.26
PGD-208	ENST00000493288	CDK8	P49336	464 aa		13.45	□□□□□ -0.26
PGD-208	ENST00000493288	TOB2	Q14106	344 aa	Predicted RBP	13.45	□□□□□ -0.26
PGD-208	ENST00000493288	CCDC178	Q5BJE1	867 aa		13.45	□□□□□ -0.26
PGD-208	ENST00000493288	TMEM67	Q5HYA8	995 aa		13.45	□□□□□ -0.26
PGD-208	ENST00000493288	NFXL1	Q6ZNB6	911 aa		13.45	□□□□□ -0.26
PGD-208	ENST00000493288	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.45	□□□□□ -0.26
PGD-208	ENST00000493288	ZFPM1	Q8IX07	1006 aa		13.45	□□□□□ -0.26
PGD-208	ENST00000493288	TMTC2	Q8N394	836 aa		13.45	□□□□□ -0.26
PGD-208	ENST00000493288	FBXL16	Q8N461	479 aa		13.45	□□□□□ -0.26
PGD-208	ENST00000493288	CHMP4C	Q96CF2	233 aa		13.45	□□□□□ -0.26
PGD-208	ENST00000493288	TMX3	Q96JJ7	454 aa		13.45	□□□□□ -0.26
PGD-208	ENST00000493288	EHD4	Q9H223	541 aa		13.45	□□□□□ -0.26
PGD-208	ENST00000493288	ADARB2	Q9NS39	739 aa	Known RBP	13.45	□□□□□ -0.26
PGD-208	ENST00000493288	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.45	□□□□□ -0.26
PGD-208	ENST00000493288	ANGEL1	Q9UNK9	670 aa	Known RBP	13.45	□□□□□ -0.26
PGD-208	ENST00000493288	TACC3	Q9Y6A5	838 aa		13.45	□□□□□ -0.26
PGD-208	ENST00000493288	TIAM2	Q8IVF5	1701 aa		13.44	□□□□□ -0.26
PGD-208	ENST00000493288	GLTPD2	A6NH11	291 aa		13.44	□□□□□ -0.26
PGD-208	ENST00000493288	CCDC69	A6NI79	296 aa		13.44	□□□□□ -0.26
PGD-208	ENST00000493288	TSPY3	P0CV98	308 aa		13.44	□□□□□ -0.26
PGD-208	ENST00000493288	TSPY8	P0CW00	308 aa		13.44	□□□□□ -0.26
PGD-208	ENST00000493288	EPS15	P42566	896 aa		13.44	□□□□□ -0.26
PGD-208	ENST00000493288	ANTXR2	P58335	489 aa		13.44	□□□□□ -0.26
PGD-208	ENST00000493288	TFAP4	Q01664	338 aa		13.44	□□□□□ -0.26
PGD-208	ENST00000493288	EVX2	Q03828	476 aa		13.44	□□□□□ -0.26
PGD-208	ENST00000493288	WTAP	Q15007	396 aa		13.44	□□□□□ -0.26
PGD-208	ENST00000493288	SYNE3	Q6ZMZ3	975 aa		13.44	□□□□□ -0.26
PGD-208	ENST00000493288	CSRNP1	Q96S65	589 aa		13.44	□□□□□ -0.26
PGD-208	ENST00000493288	LARP6	Q9BRS8	491 aa	Known RBP	13.44	□□□□□ -0.26
PGD-208	ENST00000493288	ADAMTSL1	Q8N6G6	1762 aa		13.43	□□□□□ -0.26
PGD-208	ENST00000493288	DDTL	A6NHG4	134 aa	Predicted RBP	13.43	□□□□□ -0.26
PGD-208	ENST00000493288	SH2B2	O14492	632 aa	Predicted RBP	13.43	□□□□□ -0.26
PGD-208	ENST00000493288	EGFR	P00533	1210 aa		13.43	□□□□□ -0.26
PGD-208	ENST00000493288	LIFR	P42702	1097 aa		13.43	□□□□□ -0.26
PGD-208	ENST00000493288	APOBR	Q0VD83	1088 aa		13.43	□□□□□ -0.26
PGD-208	ENST00000493288	COL9A3	Q14050	684 aa	Predicted RBP	13.43	□□□□□ -0.26
PGD-208	ENST00000493288	FAM47A	Q5JRC9	791 aa		13.43	□□□□□ -0.26
PGD-208	ENST00000493288	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.43	□□□□□ -0.26
PGD-208	ENST00000493288	SPRYD3	Q8NCJ5	442 aa		13.43	□□□□□ -0.26
PGD-208	ENST00000493288	SLC44A5	Q8NCS7	719 aa		13.43	□□□□□ -0.26
PGD-208	ENST00000493288	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.43	□□□□□ -0.26
PGD-208	ENST00000493288	ZKSCAN3	Q9BRR0	538 aa		13.43	□□□□□ -0.26
PGD-208	ENST00000493288	AGXT2	Q9BYV1	514 aa		13.43	□□□□□ -0.26
PGD-208	ENST00000493288	SLK	Q9H2G2	1235 aa	Predicted RBP	13.43	□□□□□ -0.26
PGD-208	ENST00000493288	HACL1	Q9UJ83	578 aa		13.43	□□□□□ -0.26
PGD-208	ENST00000493288	TPCN1	Q9ULQ1	816 aa		13.43	□□□□□ -0.26
PGD-208	ENST00000493288	LAMA4	Q16363	1823 aa		13.43	□□□□□ -0.26
PGD-208	ENST00000493288	ATRNL1	Q5VV63	1379 aa		13.43	□□□□□ -0.26
PGD-208	ENST00000493288	COL2A1	P02458	1487 aa	Predicted RBP	13.42	□□□□□ -0.26
PGD-208	ENST00000493288	NAV1	Q8NEY1	1877 aa		13.42	□□□□□ -0.26
PGD-208	ENST00000493288	KLF18	A0A0U1RQI7	1052 aa		13.42	□□□□□ -0.26
PGD-208	ENST00000493288	IQCA1L	A6NCM1	817 aa		13.42	□□□□□ -0.26
PGD-208	ENST00000493288	RASA1	P20936	1047 aa		13.42	□□□□□ -0.26
PGD-208	ENST00000493288	GABPA	Q06546	454 aa		13.42	□□□□□ -0.26
PGD-208	ENST00000493288	RASA3	Q14644	834 aa		13.42	□□□□□ -0.26
PGD-208	ENST00000493288	IFIT1B	Q5T764	474 aa	Known RBP	13.42	□□□□□ -0.26
PGD-208	ENST00000493288	SH3BP5L	Q7L8J4	393 aa		13.42	□□□□□ -0.26
PGD-208	ENST00000493288	TRPM4	Q8TD43	1214 aa		13.42	□□□□□ -0.26
PGD-208	ENST00000493288	IGDCC4	Q8TDY8	1250 aa		13.42	□□□□□ -0.26
PGD-208	ENST00000493288	ZNF274	Q96GC6	653 aa	Predicted RBP	13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms