RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 MKRN1Q9UHC7 482 aaKnown RBP16.39■□□□□ 0.21
PTPN7-216ENST00000492977 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.39■□□□□ 0.21
PTPN7-216ENST00000492977 SUGT1Q9Y2Z0 365 aa16.39■□□□□ 0.21
PTPN7-216ENST00000492977 MYH2Q9UKX2 1941 aa16.39■□□□□ 0.21
PTPN7-216ENST00000492977 COL11A2P13942 1736 aaPredicted RBP16.39■□□□□ 0.21
PTPN7-216ENST00000492977 LAMB1P07942 1786 aa16.39■□□□□ 0.21
PTPN7-216ENST00000492977 CYP2D7A0A087X1C5 515 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 H0YIN7 160 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 CDC27P30260 824 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 PPP2R5BQ15173 497 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 SEC23AQ15436 765 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 GRIK5Q16478 980 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 MFSD14BQ5SR56 506 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 FAM173BQ6P4H8 233 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 DPP8Q6V1X1 898 aaPredicted RBP16.38■□□□□ 0.21
PTPN7-216ENST00000492977 TTC6Q86TZ1 520 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 C2CD5Q86YS7 1000 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 STK11IPQ8N1F8 1099 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 FBXO18Q8NFZ0 1043 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 GRPEL1Q9HAV7 217 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 FAM217BQ9NTX9 383 aaPredicted RBP16.38■□□□□ 0.21
PTPN7-216ENST00000492977 GPR75-ASB3A0A0A6YYF3 556 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 CCDC196A0A1B0GTZ2 297 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 PLCG2P16885 1265 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 USP5P45974 858 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 PDE4BQ07343 736 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 DIXDC1Q155Q3 683 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 NTRK3Q16288 839 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 IQCA1Q86XH1 822 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 ZNF622Q969S3 477 aaKnown RBP eCLIP16.38■□□□□ 0.211e-6■□□□□ 10.8
PTPN7-216ENST00000492977 SPATA32Q96LK8 384 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 ZSCAN10Q96SZ4 725 aaPredicted RBP16.38■□□□□ 0.21
PTPN7-216ENST00000492977 EYA3Q99504 573 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 ZKSCAN3Q9BRR0 538 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 RTFDC1Q9BY42 306 aaPredicted RBP16.38■□□□□ 0.21
PTPN7-216ENST00000492977 MCM9Q9NXL9 1143 aa16.38■□□□□ 0.21
PTPN7-216ENST00000492977 TFIP11Q9UBB9 837 aaKnown RBP16.38■□□□□ 0.21
PTPN7-216ENST00000492977 XRCC6P12956 609 aaKnown RBP eCLIP16.37■□□□□ 0.21
PTPN7-216ENST00000492977 SH3RF3Q8TEJ3 882 aaPredicted RBP16.37■□□□□ 0.21
PTPN7-216ENST00000492977 LEO1Q8WVC0 666 aaPredicted RBP16.37■□□□□ 0.21
PTPN7-216ENST00000492977 ZNF396Q96N95 335 aaPredicted RBP16.37■□□□□ 0.21
PTPN7-216ENST00000492977 TNKSO95271 1327 aa16.37■□□□□ 0.21
PTPN7-216ENST00000492977 STK36Q9NRP7 1315 aa16.37■□□□□ 0.21
PTPN7-216ENST00000492977 MYH15Q9Y2K3 1946 aa16.36■□□□□ 0.21
PTPN7-216ENST00000492977 SMIM22K7EJ46 135 aa16.36■□□□□ 0.21
PTPN7-216ENST00000492977 RANBP6O60518 1105 aaKnown RBP16.36■□□□□ 0.21
PTPN7-216ENST00000492977 PPFIA3O75145 1194 aa16.36■□□□□ 0.21
PTPN7-216ENST00000492977 LETM1O95202 739 aaPredicted RBP16.36■□□□□ 0.21
PTPN7-216ENST00000492977 IFNAR1P17181 557 aa16.36■□□□□ 0.21
PTPN7-216ENST00000492977 RXRAP19793 462 aa16.36■□□□□ 0.21
PTPN7-216ENST00000492977 IARSP41252 1262 aaKnown RBP16.36■□□□□ 0.21
PTPN7-216ENST00000492977 FOSBP53539 338 aa16.36■□□□□ 0.21
PTPN7-216ENST00000492977 RTN1Q16799 776 aa16.36■□□□□ 0.21
PTPN7-216ENST00000492977 CCDC183Q5T5S1 534 aa16.36■□□□□ 0.21
PTPN7-216ENST00000492977 C12orf60Q5U649 245 aa16.36■□□□□ 0.21
PTPN7-216ENST00000492977 AMOTL1Q8IY63 956 aa16.36■□□□□ 0.21
PTPN7-216ENST00000492977 ZNF654Q8IZM8 581 aa16.36■□□□□ 0.21
PTPN7-216ENST00000492977 RIMBP2O15034 1052 aa16.35■□□□□ 0.21
PTPN7-216ENST00000492977 GTF2IP78347 998 aa16.35■□□□□ 0.21
PTPN7-216ENST00000492977 SSRP1Q08945 709 aaKnown RBP16.35■□□□□ 0.21
PTPN7-216ENST00000492977 SF3B2Q13435 895 aaKnown RBP16.35■□□□□ 0.21
PTPN7-216ENST00000492977 LRSAM1Q6UWE0 723 aa16.35■□□□□ 0.21
PTPN7-216ENST00000492977 ENAHQ8N8S7 591 aaPredicted RBP16.35■□□□□ 0.21
PTPN7-216ENST00000492977 FANCBQ8NB91 859 aa16.35■□□□□ 0.21
PTPN7-216ENST00000492977 WASF1Q92558 559 aa16.35■□□□□ 0.21
PTPN7-216ENST00000492977 CNKSR1Q969H4 720 aa16.35■□□□□ 0.21
PTPN7-216ENST00000492977 MYL10Q9BUA6 226 aa16.35■□□□□ 0.21
PTPN7-216ENST00000492977 GAKO14976 1311 aa16.35■□□□□ 0.21
PTPN7-216ENST00000492977 PRDM1O75626 825 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 FMNL1O95466 1100 aaPredicted RBP16.34■□□□□ 0.21
PTPN7-216ENST00000492977 USP17L8P0C7I0 530 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 BTDP43251 543 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 BAG6P46379 1132 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 GUCY1B3Q02153 619 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 BRAPQ7Z569 592 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 CCDC144CPQ8IYA2 1237 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 ALG1Q9BT22 464 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 ROBO3Q96MS0 1386 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 DLEC1Q9Y238 1755 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 SYCE3A1L190 88 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 GOLGA6L4A6NEF3 574 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 CALM1P0DP23 149 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 CALM2P0DP24 149 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 CALM3P0DP25 149 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 CYP2D6P10635 497 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 IFIT1BQ5T764 474 aaKnown RBP16.34■□□□□ 0.21
PTPN7-216ENST00000492977 OLFM4Q6UX06 510 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 CATIPQ7Z7H3 387 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 TGFBRAP1Q8WUH2 860 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 RCOR1Q9UKL0 485 aa16.34■□□□□ 0.21
PTPN7-216ENST00000492977 G3V3G9 751 aa16.33■□□□□ 0.2
PTPN7-216ENST00000492977 CACNB1Q02641 598 aaPredicted RBP16.33■□□□□ 0.2
PTPN7-216ENST00000492977 DCAF8Q5TAQ9 597 aa16.33■□□□□ 0.2
PTPN7-216ENST00000492977 ILDR1Q86SU0 546 aaPredicted RBP16.33■□□□□ 0.2
PTPN7-216ENST00000492977 TRIM22Q8IYM9 498 aa16.33■□□□□ 0.2
PTPN7-216ENST00000492977 PHKBQ93100 1093 aa16.33■□□□□ 0.2
PTPN7-216ENST00000492977 TRIM29Q14134 588 aa16.32■□□□□ 0.2
PTPN7-216ENST00000492977 CCDC178Q5BJE1 867 aa16.32■□□□□ 0.2
PTPN7-216ENST00000492977 OTUD7BQ6GQQ9 843 aa16.32■□□□□ 0.2
PTPN7-216ENST00000492977 PODNQ7Z5L7 613 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms