RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 PPP4CP60510 307 aa22.6■■□□□ 1.21
CHD1L-209ENST00000492728 GADL1Q6ZQY3 521 aa22.6■■□□□ 1.21
CHD1L-209ENST00000492728 MAPKAPK5Q8IW41 473 aa22.6■■□□□ 1.21
CHD1L-209ENST00000492728 SH3TC2Q8TF17 1288 aa22.6■■□□□ 1.21
CHD1L-209ENST00000492728 PARK7Q99497 189 aaKnown RBP22.6■■□□□ 1.21
CHD1L-209ENST00000492728 DNAJC18Q9H819 358 aa22.6■■□□□ 1.21
CHD1L-209ENST00000492728 EN2P19622 333 aaPredicted RBP22.59■■□□□ 1.21
CHD1L-209ENST00000492728 PSMC4P43686 418 aa22.59■■□□□ 1.21
CHD1L-209ENST00000492728 DYNLL1P63167 89 aaKnown RBP22.59■■□□□ 1.21
CHD1L-209ENST00000492728 KIF22Q14807 665 aa22.59■■□□□ 1.21
CHD1L-209ENST00000492728 SLC9C1Q4G0N8 1177 aa22.59■■□□□ 1.21
CHD1L-209ENST00000492728 SIRT2Q8IXJ6 389 aa22.59■■□□□ 1.21
CHD1L-209ENST00000492728 ANTXR1Q9H6X2 564 aa22.59■■□□□ 1.21
CHD1L-209ENST00000492728 COG6Q9Y2V7 657 aa22.59■■□□□ 1.21
CHD1L-209ENST00000492728 LOC285556D6RIA3 1793 aa22.58■■□□□ 1.21
CHD1L-209ENST00000492728 OSBPP22059 807 aa22.58■■□□□ 1.21
CHD1L-209ENST00000492728 JAG1P78504 1218 aa22.58■■□□□ 1.21
CHD1L-209ENST00000492728 ARHGEF6Q15052 776 aa22.58■■□□□ 1.21
CHD1L-209ENST00000492728 SHROOM1Q2M3G4 852 aaPredicted RBP22.58■■□□□ 1.21
CHD1L-209ENST00000492728 TREML2Q5T2D2 321 aa22.58■■□□□ 1.21
CHD1L-209ENST00000492728 AACSQ86V21 672 aa22.58■■□□□ 1.21
CHD1L-209ENST00000492728 TGFBRAP1Q8WUH2 860 aa22.58■■□□□ 1.21
CHD1L-209ENST00000492728 IL1RAPL2Q9NP60 686 aa22.58■■□□□ 1.21
CHD1L-209ENST00000492728 MYCP01106 439 aaPredicted RBP22.57■■□□□ 1.2
CHD1L-209ENST00000492728 CAP2P40123 477 aa22.57■■□□□ 1.2
CHD1L-209ENST00000492728 FASTKD5Q7L8L6 764 aaKnown RBP22.57■■□□□ 1.2
CHD1L-209ENST00000492728 BAG3O95817 575 aa22.56■■□□□ 1.2
CHD1L-209ENST00000492728 CYP7A1P22680 504 aa22.56■■□□□ 1.2
CHD1L-209ENST00000492728 PIAS4Q8N2W9 510 aaPredicted RBP22.56■■□□□ 1.2
CHD1L-209ENST00000492728 NOL10Q9BSC4 688 aaKnown RBP22.56■■□□□ 1.2
CHD1L-209ENST00000492728 ZBTB40Q9NUA8 1239 aa22.56■■□□□ 1.2
CHD1L-209ENST00000492728 SRRDQ9UH36 339 aa22.56■■□□□ 1.2
CHD1L-209ENST00000492728 IDH1O75874 414 aaKnown RBP22.55■■□□□ 1.2
CHD1L-209ENST00000492728 PRPF38BQ5VTL8 546 aaKnown RBP22.55■■□□□ 1.2
CHD1L-209ENST00000492728 ERC1Q8IUD2 1116 aa22.55■■□□□ 1.2
CHD1L-209ENST00000492728 MIGA1Q8NAN2 632 aa22.55■■□□□ 1.2
CHD1L-209ENST00000492728 RHPN1Q8TCX5 695 aa22.55■■□□□ 1.2
CHD1L-209ENST00000492728 SAP30BPQ9UHR5 308 aaKnown RBP22.55■■□□□ 1.2
CHD1L-209ENST00000492728 HERC5Q9UII4 1024 aaKnown RBP22.55■■□□□ 1.2
CHD1L-209ENST00000492728 PALD1Q9ULE6 856 aa22.55■■□□□ 1.2
CHD1L-209ENST00000492728 AGTPBP1Q9UPW5 1226 aa22.55■■□□□ 1.2
CHD1L-209ENST00000492728 SLC45A1Q9Y2W3 748 aa22.55■■□□□ 1.2
CHD1L-209ENST00000492728 GNRH1P01148 92 aa22.54■■□□□ 1.2
CHD1L-209ENST00000492728 PLCG2P16885 1265 aa22.54■■□□□ 1.2
CHD1L-209ENST00000492728 PRKCZQ05513 592 aa22.54■■□□□ 1.2
CHD1L-209ENST00000492728 SPP2Q13103 211 aa22.54■■□□□ 1.2
CHD1L-209ENST00000492728 SLC4A8Q2Y0W8 1093 aa22.54■■□□□ 1.2
CHD1L-209ENST00000492728 C20orf194Q5TEA3 1177 aa22.54■■□□□ 1.2
CHD1L-209ENST00000492728 METTL16Q86W50 562 aaKnown RBP22.54■■□□□ 1.2
CHD1L-209ENST00000492728 PI4KBQ9UBF8 816 aa22.54■■□□□ 1.2
CHD1L-209ENST00000492728 APBB1O00213 710 aa22.53■■□□□ 1.2
CHD1L-209ENST00000492728 FMNL1O95466 1100 aaPredicted RBP22.53■■□□□ 1.2
CHD1L-209ENST00000492728 PRMT2P55345 433 aa22.53■■□□□ 1.2
CHD1L-209ENST00000492728 MAGEB6Q8N7X4 407 aa22.53■■□□□ 1.2
CHD1L-209ENST00000492728 DHX36Q9H2U1 1008 aaKnown RBP22.53■■□□□ 1.2
CHD1L-209ENST00000492728 RCAN3Q9UKA8 241 aa22.53■■□□□ 1.2
CHD1L-209ENST00000492728 DDX19BQ9UMR2 479 aa22.53■■□□□ 1.2
CHD1L-209ENST00000492728 MGAMO43451 1857 aa22.53■■□□□ 1.2
CHD1L-209ENST00000492728 MYPNQ86TC9 1320 aa22.53■■□□□ 1.2
CHD1L-209ENST00000492728 DDX60LQ5H9U9 1706 aaKnown RBP22.52■■□□□ 1.2
CHD1L-209ENST00000492728 HMGCS2P54868 508 aa22.52■■□□□ 1.2
CHD1L-209ENST00000492728 MTFR1Q15390 333 aa22.52■■□□□ 1.2
CHD1L-209ENST00000492728 NBPF11Q86T75 865 aa22.52■■□□□ 1.2
CHD1L-209ENST00000492728 ZNF280CQ8ND82 737 aa22.52■■□□□ 1.2
CHD1L-209ENST00000492728 GABRQQ9UN88 632 aa22.52■■□□□ 1.2
CHD1L-209ENST00000492728 IGSF3O75054 1194 aa22.51■■□□□ 1.19
CHD1L-209ENST00000492728 PROCA1Q8NCQ7 364 aaPredicted RBP22.51■■□□□ 1.19
CHD1L-209ENST00000492728 TMEM106CQ9BVX2 250 aa22.51■■□□□ 1.19
CHD1L-209ENST00000492728 USP17L5A8MUK1 530 aa22.5■■□□□ 1.19
CHD1L-209ENST00000492728 GDF11O95390 407 aa22.5■■□□□ 1.19
CHD1L-209ENST00000492728 SLC34A2O95436 690 aa22.5■■□□□ 1.19
CHD1L-209ENST00000492728 MS4A1P11836 297 aa22.5■■□□□ 1.19
CHD1L-209ENST00000492728 FCGRTP55899 365 aa22.5■■□□□ 1.19
CHD1L-209ENST00000492728 RPAP2Q8IXW5 612 aaPredicted RBP22.5■■□□□ 1.19
CHD1L-209ENST00000492728 HSP90AB4PQ58FF6 505 aa22.49■■□□□ 1.19
CHD1L-209ENST00000492728 SH3D19Q5HYK7 790 aa22.49■■□□□ 1.19
CHD1L-209ENST00000492728 ANKRD13CQ8N6S4 541 aa22.49■■□□□ 1.19
CHD1L-209ENST00000492728 RAET1EQ8TD07 263 aa22.49■■□□□ 1.19
CHD1L-209ENST00000492728 SMCR8Q8TEV9 937 aaPredicted RBP22.49■■□□□ 1.19
CHD1L-209ENST00000492728 SHISA4Q96DD7 197 aa22.49■■□□□ 1.19
CHD1L-209ENST00000492728 KIF1BPQ96EK5 621 aa22.49■■□□□ 1.19
CHD1L-209ENST00000492728 RIOK1Q9BRS2 568 aaKnown RBP22.49■■□□□ 1.19
CHD1L-209ENST00000492728 GRK4P32298 578 aa22.48■■□□□ 1.19
CHD1L-209ENST00000492728 MTMR2Q13614 643 aa22.48■■□□□ 1.19
CHD1L-209ENST00000492728 EDC3Q96F86 508 aaKnown RBP22.48■■□□□ 1.19
CHD1L-209ENST00000492728 ZBTB21Q9ULJ3 1066 aa22.48■■□□□ 1.19
CHD1L-209ENST00000492728 MYH1P12882 1939 aa22.47■■□□□ 1.19
CHD1L-209ENST00000492728 HOXD10P28358 340 aa22.47■■□□□ 1.19
CHD1L-209ENST00000492728 EVX2Q03828 476 aa22.47■■□□□ 1.19
CHD1L-209ENST00000492728 MAP3K12Q12852 859 aa22.47■■□□□ 1.19
CHD1L-209ENST00000492728 FOXP4Q8IVH2 680 aaPredicted RBP22.47■■□□□ 1.19
CHD1L-209ENST00000492728 CRACR2BQ8N4Y2 399 aaPredicted RBP22.47■■□□□ 1.19
CHD1L-209ENST00000492728 WDR18Q9BV38 432 aa22.47■■□□□ 1.19
CHD1L-209ENST00000492728 TBC1D2Q9BYX2 928 aa22.47■■□□□ 1.19
CHD1L-209ENST00000492728 ASNSP08243 561 aa22.46■■□□□ 1.19
CHD1L-209ENST00000492728 PDE6AP16499 860 aa22.46■■□□□ 1.19
CHD1L-209ENST00000492728 CLASRPQ8N2M8 674 aaKnown RBP22.46■■□□□ 1.19
CHD1L-209ENST00000492728 BCL11AQ9H165 835 aa22.46■■□□□ 1.19
CHD1L-209ENST00000492728 ASCC2Q9H1I8 757 aaPredicted RBP22.46■■□□□ 1.19
CHD1L-209ENST00000492728 PEX10O60683 326 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms