RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 CYP2C8P10632 490 aa21.12■□□□□ 0.97
SGMS1-204ENST00000492601 PARK7Q99497 189 aaKnown RBP21.12■□□□□ 0.97
SGMS1-204ENST00000492601 CTGFP29279 349 aa21.11■□□□□ 0.97
SGMS1-204ENST00000492601 FASTKD5Q7L8L6 764 aaKnown RBP21.11■□□□□ 0.97
SGMS1-204ENST00000492601 ZNF333Q96JL9 665 aa21.11■□□□□ 0.97
SGMS1-204ENST00000492601 NDUFB9Q9Y6M9 179 aa21.11■□□□□ 0.97
SGMS1-204ENST00000492601 MYCP01106 439 aaPredicted RBP21.1■□□□□ 0.97
SGMS1-204ENST00000492601 MS4A1P11836 297 aa21.1■□□□□ 0.97
SGMS1-204ENST00000492601 PLCG2P16885 1265 aa21.1■□□□□ 0.97
SGMS1-204ENST00000492601 PSMC4P43686 418 aa21.1■□□□□ 0.97
SGMS1-204ENST00000492601 NBPF11Q86T75 865 aa21.1■□□□□ 0.97
SGMS1-204ENST00000492601 AACSQ86V21 672 aa21.1■□□□□ 0.97
SGMS1-204ENST00000492601 MAPKAPK5Q8IW41 473 aa21.1■□□□□ 0.97
SGMS1-204ENST00000492601 TGFBRAP1Q8WUH2 860 aa21.1■□□□□ 0.97
SGMS1-204ENST00000492601 LOC285556D6RIA3 1793 aa21.1■□□□□ 0.97
SGMS1-204ENST00000492601 PPP4CP60510 307 aa21.09■□□□□ 0.97
SGMS1-204ENST00000492601 ERC1Q8IUD2 1116 aa21.09■□□□□ 0.97
SGMS1-204ENST00000492601 SH3TC2Q8TF17 1288 aa21.09■□□□□ 0.97
SGMS1-204ENST00000492601 TRIM47Q96LD4 638 aa21.09■□□□□ 0.97
SGMS1-204ENST00000492601 IL1RAPL2Q9NP60 686 aa21.09■□□□□ 0.97
SGMS1-204ENST00000492601 COG6Q9Y2V7 657 aa21.09■□□□□ 0.97
SGMS1-204ENST00000492601 APBB1O00213 710 aa21.08■□□□□ 0.97
SGMS1-204ENST00000492601 IDH1O75874 414 aaKnown RBP21.08■□□□□ 0.97
SGMS1-204ENST00000492601 FMNL1O95466 1100 aaPredicted RBP21.08■□□□□ 0.97
SGMS1-204ENST00000492601 GNRH1P01148 92 aa21.08■□□□□ 0.97
SGMS1-204ENST00000492601 CYP7A1P22680 504 aa21.08■□□□□ 0.97
SGMS1-204ENST00000492601 DYNLL1P63167 89 aaKnown RBP21.08■□□□□ 0.97
SGMS1-204ENST00000492601 RRP1BQ14684 758 aaKnown RBP21.08■□□□□ 0.97
SGMS1-204ENST00000492601 TMEM106CQ9BVX2 250 aa21.08■□□□□ 0.97
SGMS1-204ENST00000492601 FLT1P17948 1338 aa21.07■□□□□ 0.96
SGMS1-204ENST00000492601 BCRP11274 1271 aa21.07■□□□□ 0.96
SGMS1-204ENST00000492601 EN2P19622 333 aaPredicted RBP21.07■□□□□ 0.96
SGMS1-204ENST00000492601 CAP2P40123 477 aa21.07■□□□□ 0.96
SGMS1-204ENST00000492601 BCL11AQ9H165 835 aa21.07■□□□□ 0.96
SGMS1-204ENST00000492601 SRRDQ9UH36 339 aa21.07■□□□□ 0.96
SGMS1-204ENST00000492601 HERC5Q9UII4 1024 aaKnown RBP21.07■□□□□ 0.96
SGMS1-204ENST00000492601 OSBPP22059 807 aa21.06■□□□□ 0.96
SGMS1-204ENST00000492601 PRMT2P55345 433 aa21.06■□□□□ 0.96
SGMS1-204ENST00000492601 SPP2Q13103 211 aa21.06■□□□□ 0.96
SGMS1-204ENST00000492601 MIGA1Q8NAN2 632 aa21.06■□□□□ 0.96
SGMS1-204ENST00000492601 RHPN1Q8TCX5 695 aa21.06■□□□□ 0.96
SGMS1-204ENST00000492601 DHX36Q9H2U1 1008 aaKnown RBP21.06■□□□□ 0.96
SGMS1-204ENST00000492601 ANTXR1Q9H6X2 564 aa21.06■□□□□ 0.96
SGMS1-204ENST00000492601 PI4KBQ9UBF8 816 aa21.06■□□□□ 0.96
SGMS1-204ENST00000492601 SAP30BPQ9UHR5 308 aaKnown RBP21.06■□□□□ 0.96
SGMS1-204ENST00000492601 PALD1Q9ULE6 856 aa21.06■□□□□ 0.96
SGMS1-204ENST00000492601 DDX19BQ9UMR2 479 aa21.06■□□□□ 0.96
SGMS1-204ENST00000492601 SLC4A8Q2Y0W8 1093 aa21.05■□□□□ 0.96
SGMS1-204ENST00000492601 HSP90AB4PQ58FF6 505 aa21.05■□□□□ 0.96
SGMS1-204ENST00000492601 TREML2Q5T2D2 321 aa21.05■□□□□ 0.96
SGMS1-204ENST00000492601 MAGEB6Q8N7X4 407 aa21.05■□□□□ 0.96
SGMS1-204ENST00000492601 SMCR8Q8TEV9 937 aaPredicted RBP21.05■□□□□ 0.96
SGMS1-204ENST00000492601 RCAN3Q9UKA8 241 aa21.05■□□□□ 0.96
SGMS1-204ENST00000492601 SLC45A1Q9Y2W3 748 aa21.05■□□□□ 0.96
SGMS1-204ENST00000492601 MYPNQ86TC9 1320 aa21.04■□□□□ 0.96
SGMS1-204ENST00000492601 HOXD10P28358 340 aa21.04■□□□□ 0.96
SGMS1-204ENST00000492601 PRPF38BQ5VTL8 546 aaKnown RBP21.04■□□□□ 0.96
SGMS1-204ENST00000492601 RPAP2Q8IXW5 612 aaPredicted RBP21.04■□□□□ 0.96
SGMS1-204ENST00000492601 CRACR2BQ8N4Y2 399 aaPredicted RBP21.04■□□□□ 0.96
SGMS1-204ENST00000492601 ZNF280CQ8ND82 737 aa21.04■□□□□ 0.96
SGMS1-204ENST00000492601 RAET1EQ8TD07 263 aa21.04■□□□□ 0.96
SGMS1-204ENST00000492601 TRIM34Q9BYJ4 488 aa21.04■□□□□ 0.96
SGMS1-204ENST00000492601 ZBTB40Q9NUA8 1239 aa21.04■□□□□ 0.96
SGMS1-204ENST00000492601 AGTPBP1Q9UPW5 1226 aa21.04■□□□□ 0.96
SGMS1-204ENST00000492601 CEP290O15078 2479 aa21.03■□□□□ 0.96
SGMS1-204ENST00000492601 NAV1Q8NEY1 1877 aa21.03■□□□□ 0.96
SGMS1-204ENST00000492601 USP17L5A8MUK1 530 aa21.03■□□□□ 0.96
SGMS1-204ENST00000492601 IGSF3O75054 1194 aa21.03■□□□□ 0.96
SGMS1-204ENST00000492601 HMGCS2P54868 508 aa21.03■□□□□ 0.96
SGMS1-204ENST00000492601 FCGRTP55899 365 aa21.03■□□□□ 0.96
SGMS1-204ENST00000492601 SIRT2Q8IXJ6 389 aa21.03■□□□□ 0.96
SGMS1-204ENST00000492601 DNAJC18Q9H819 358 aa21.03■□□□□ 0.96
SGMS1-204ENST00000492601 MYH7P12883 1935 aa21.02■□□□□ 0.96
SGMS1-204ENST00000492601 HMMRO75330 724 aa21.02■□□□□ 0.96
SGMS1-204ENST00000492601 JAG1P78504 1218 aa21.02■□□□□ 0.96
SGMS1-204ENST00000492601 MAP3K12Q12852 859 aa21.02■□□□□ 0.96
SGMS1-204ENST00000492601 PROCA1Q8NCQ7 364 aaPredicted RBP21.02■□□□□ 0.96
SGMS1-204ENST00000492601 GDF11O95390 407 aa21.01■□□□□ 0.95
SGMS1-204ENST00000492601 PRKCZQ05513 592 aa21.01■□□□□ 0.95
SGMS1-204ENST00000492601 SHROOM1Q2M3G4 852 aaPredicted RBP21.01■□□□□ 0.95
SGMS1-204ENST00000492601 FOXP4Q8IVH2 680 aaPredicted RBP21.01■□□□□ 0.95
SGMS1-204ENST00000492601 CLASRPQ8N2M8 674 aaKnown RBP21.01■□□□□ 0.95
SGMS1-204ENST00000492601 KIF1BPQ96EK5 621 aa21.01■□□□□ 0.95
SGMS1-204ENST00000492601 TBC1D2Q9BYX2 928 aa21.01■□□□□ 0.95
SGMS1-204ENST00000492601 AS3MTQ9HBK9 375 aa21.01■□□□□ 0.95
SGMS1-204ENST00000492601 MYH8P13535 1937 aa21■□□□□ 0.95
SGMS1-204ENST00000492601 HLA-DOAP06340 250 aa21■□□□□ 0.95
SGMS1-204ENST00000492601 GRK4P32298 578 aa21■□□□□ 0.95
SGMS1-204ENST00000492601 USP5P45974 858 aa21■□□□□ 0.95
SGMS1-204ENST00000492601 MTFR1Q15390 333 aa21■□□□□ 0.95
SGMS1-204ENST00000492601 METTL16Q86W50 562 aaKnown RBP21■□□□□ 0.95
SGMS1-204ENST00000492601 ANKRD13CQ8N6S4 541 aa21■□□□□ 0.95
SGMS1-204ENST00000492601 PNMA3Q9UL41 463 aa21■□□□□ 0.95
SGMS1-204ENST00000492601 GABRQQ9UN88 632 aa21■□□□□ 0.95
SGMS1-204ENST00000492601 ASNSP08243 561 aa20.99■□□□□ 0.95
SGMS1-204ENST00000492601 IFIT2P09913 472 aaKnown RBP20.99■□□□□ 0.95
SGMS1-204ENST00000492601 C20orf194Q5TEA3 1177 aa20.99■□□□□ 0.95
SGMS1-204ENST00000492601 BIN2Q9UBW5 565 aaPredicted RBP20.99■□□□□ 0.95
SGMS1-204ENST00000492601 DDX60LQ5H9U9 1706 aaKnown RBP20.98■□□□□ 0.95
SGMS1-204ENST00000492601 MTMR2Q13614 643 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms