RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 CEP126Q9P2H0 1117 aa16.28■□□□□ 0.2
HDAC3-213ENST00000492506 GJD2Q9UKL4 321 aa16.28■□□□□ 0.2
HDAC3-213ENST00000492506 TAOK2Q9UL54 1235 aa16.28■□□□□ 0.2
HDAC3-213ENST00000492506 SIPA1L1O43166 1804 aa16.27■□□□□ 0.2
HDAC3-213ENST00000492506 TBC1D12O60347 775 aa16.27■□□□□ 0.2
HDAC3-213ENST00000492506 RHBDL3P58872 404 aa16.27■□□□□ 0.2
HDAC3-213ENST00000492506 TRIM32Q13049 653 aa16.27■□□□□ 0.2
HDAC3-213ENST00000492506 CCDC102BQ68D86 513 aa16.27■□□□□ 0.2
HDAC3-213ENST00000492506 C7orf61Q8IZ16 206 aa16.27■□□□□ 0.2
HDAC3-213ENST00000492506 PROCA1Q8NCQ7 364 aaPredicted RBP16.27■□□□□ 0.2
HDAC3-213ENST00000492506 ZNF384Q8TF68 577 aa16.27■□□□□ 0.2
HDAC3-213ENST00000492506 PDS5AQ29RF7 1337 aaKnown RBP16.26■□□□□ 0.19
HDAC3-213ENST00000492506 FAM196BA6NMK8 535 aa16.26■□□□□ 0.19
HDAC3-213ENST00000492506 ANP32AP39687 249 aaKnown RBP16.26■□□□□ 0.19
HDAC3-213ENST00000492506 BTDP43251 543 aa16.26■□□□□ 0.19
HDAC3-213ENST00000492506 PICALMQ13492 652 aa16.26■□□□□ 0.19
HDAC3-213ENST00000492506 RASGRF1Q13972 1273 aa16.26■□□□□ 0.19
HDAC3-213ENST00000492506 ZGPATQ8N5A5 531 aaKnown RBP16.26■□□□□ 0.19
HDAC3-213ENST00000492506 PNMA3Q9UL41 463 aa16.26■□□□□ 0.19
HDAC3-213ENST00000492506 ZMYND8Q9ULU4 1186 aaPredicted RBP16.26■□□□□ 0.19
HDAC3-213ENST00000492506 CDK5RAP2Q96SN8 1893 aa16.26■□□□□ 0.19
HDAC3-213ENST00000492506 MROH7-TTC4A0A0A0MT08 1334 aa16.25■□□□□ 0.19
HDAC3-213ENST00000492506 GPR75-ASB3A0A0A6YYF3 556 aa16.25■□□□□ 0.19
HDAC3-213ENST00000492506 NPM3O75607 178 aaKnown RBP16.25■□□□□ 0.19
HDAC3-213ENST00000492506 HMGCRP04035 888 aa16.25■□□□□ 0.19
HDAC3-213ENST00000492506 IL15P40933 162 aaPredicted RBP16.25■□□□□ 0.19
HDAC3-213ENST00000492506 SPP2Q13103 211 aa16.25■□□□□ 0.19
HDAC3-213ENST00000492506 DZIP1Q86YF9 867 aaKnown RBP16.25■□□□□ 0.19
HDAC3-213ENST00000492506 FRMPD3Q5JV73 1810 aa16.24■□□□□ 0.19
HDAC3-213ENST00000492506 RPTORQ8N122 1335 aa16.24■□□□□ 0.19
HDAC3-213ENST00000492506 GCLCP48506 637 aaPredicted RBP16.24■□□□□ 0.19
HDAC3-213ENST00000492506 RRP1BQ14684 758 aaKnown RBP16.24■□□□□ 0.19
HDAC3-213ENST00000492506 LRIT3Q3SXY7 679 aa16.24■□□□□ 0.19
HDAC3-213ENST00000492506 Q7L0L9 218 aa16.24■□□□□ 0.19
HDAC3-213ENST00000492506 DEFB123Q8N688 67 aa16.24■□□□□ 0.19
HDAC3-213ENST00000492506 ZNF280CQ8ND82 737 aa16.24■□□□□ 0.19
HDAC3-213ENST00000492506 NBPF3Q9H094 633 aa16.24■□□□□ 0.19
HDAC3-213ENST00000492506 ABCF2Q9UG63 623 aa16.24■□□□□ 0.19
HDAC3-213ENST00000492506 OGDHLQ9ULD0 1010 aa16.24■□□□□ 0.19
HDAC3-213ENST00000492506 PA2G4Q9UQ80 394 aaKnown RBP16.24■□□□□ 0.19
HDAC3-213ENST00000492506 COL2A1P02458 1487 aaPredicted RBP16.23■□□□□ 0.19
HDAC3-213ENST00000492506 SYN1P17600 705 aa16.23■□□□□ 0.19
HDAC3-213ENST00000492506 MAGEA10P43363 369 aaPredicted RBP16.23■□□□□ 0.19
HDAC3-213ENST00000492506 TIMM10P62072 90 aa16.23■□□□□ 0.19
HDAC3-213ENST00000492506 MECOMQ03112 1051 aa16.23■□□□□ 0.19
HDAC3-213ENST00000492506 GLIPR1L2Q4G1C9 344 aa16.23■□□□□ 0.19
HDAC3-213ENST00000492506 MAP3K21Q5TCX8 1036 aa16.23■□□□□ 0.19
HDAC3-213ENST00000492506 SLF2Q8IX21 1173 aa16.23■□□□□ 0.19
HDAC3-213ENST00000492506 TRIB2Q92519 343 aa16.23■□□□□ 0.19
HDAC3-213ENST00000492506 OSBPL5Q9H0X9 879 aaPredicted RBP16.23■□□□□ 0.19
HDAC3-213ENST00000492506 HMX1Q9NP08 348 aaPredicted RBP16.23■□□□□ 0.19
HDAC3-213ENST00000492506 COPRSQ9NQ92 184 aa16.23■□□□□ 0.19
HDAC3-213ENST00000492506 EYSQ5T1H1 3165 aa16.22■□□□□ 0.19
HDAC3-213ENST00000492506 FOCADQ5VW36 1801 aa16.22■□□□□ 0.19
HDAC3-213ENST00000492506 VCANP13611 3396 aa16.22■□□□□ 0.19
HDAC3-213ENST00000492506 UBTFL1P0CB47 393 aaPredicted RBP16.22■□□□□ 0.19
HDAC3-213ENST00000492506 HMGCS2P54868 508 aa16.22■□□□□ 0.19
HDAC3-213ENST00000492506 SH3D19Q5HYK7 790 aa16.22■□□□□ 0.19
HDAC3-213ENST00000492506 FAM9BQ8IZU0 186 aa16.22■□□□□ 0.19
HDAC3-213ENST00000492506 ASCC2Q9H1I8 757 aaPredicted RBP16.22■□□□□ 0.19
HDAC3-213ENST00000492506 C11orf49Q9H6J7 331 aa16.22■□□□□ 0.19
HDAC3-213ENST00000492506 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.22■□□□□ 0.19
HDAC3-213ENST00000492506 MTMR10Q9NXD2 777 aa16.22■□□□□ 0.19
HDAC3-213ENST00000492506 MORF4L1Q9UBU8 362 aa16.22■□□□□ 0.19
HDAC3-213ENST00000492506 STXBP5LQ9Y2K9 1186 aa16.22■□□□□ 0.19
HDAC3-213ENST00000492506 PFASO15067 1338 aa16.21■□□□□ 0.19
HDAC3-213ENST00000492506 CAP2P40123 477 aa16.21■□□□□ 0.19
HDAC3-213ENST00000492506 SPTY2D1Q68D10 685 aaPredicted RBP16.21■□□□□ 0.19
HDAC3-213ENST00000492506 TDHQ8IZJ6 230 aa16.21■□□□□ 0.19
HDAC3-213ENST00000492506 TBC1D2Q9BYX2 928 aa16.21■□□□□ 0.19
HDAC3-213ENST00000492506 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.21■□□□□ 0.19
HDAC3-213ENST00000492506 PABPC4Q13310 644 aaKnown RBP eCLIP16.2■□□□□ 0.18
HDAC3-213ENST00000492506 ALDH1L2Q3SY69 923 aa16.2■□□□□ 0.18
HDAC3-213ENST00000492506 XAGE2Q96GT9 111 aa16.2■□□□□ 0.18
HDAC3-213ENST00000492506 MYO5AQ9Y4I1 1855 aaKnown RBP16.2■□□□□ 0.18
HDAC3-213ENST00000492506 SPTBN5Q9NRC6 3674 aaKnown RBP16.19■□□□□ 0.18
HDAC3-213ENST00000492506 A0A1B0GUL7 405 aa16.19■□□□□ 0.18
HDAC3-213ENST00000492506 USP17L5A8MUK1 530 aa16.19■□□□□ 0.18
HDAC3-213ENST00000492506 PEX10O60683 326 aa16.19■□□□□ 0.18
HDAC3-213ENST00000492506 COL6A1P12109 1028 aa16.19■□□□□ 0.18
HDAC3-213ENST00000492506 NSUN4Q96CB9 384 aaKnown RBP16.19■□□□□ 0.18
HDAC3-213ENST00000492506 IPO9Q96P70 1041 aaKnown RBP16.19■□□□□ 0.18
HDAC3-213ENST00000492506 TXNRD2Q9NNW7 524 aa16.19■□□□□ 0.18
HDAC3-213ENST00000492506 MAST2Q6P0Q8 1798 aa16.18■□□□□ 0.18
HDAC3-213ENST00000492506 E9PSI1 815 aa16.18■□□□□ 0.18
HDAC3-213ENST00000492506 MAP4K4O95819 1239 aaPredicted RBP16.18■□□□□ 0.18
HDAC3-213ENST00000492506 XRCC5P13010 732 aaKnown RBP16.18■□□□□ 0.18
HDAC3-213ENST00000492506 PRKAR2AP13861 404 aaKnown RBP16.18■□□□□ 0.18
HDAC3-213ENST00000492506 CYP2B6P20813 491 aa16.18■□□□□ 0.18
HDAC3-213ENST00000492506 JAG1P78504 1218 aa16.18■□□□□ 0.18
HDAC3-213ENST00000492506 PI16Q6UXB8 463 aa16.18■□□□□ 0.18
HDAC3-213ENST00000492506 WDR18Q9BV38 432 aa16.18■□□□□ 0.18
HDAC3-213ENST00000492506 HMG20BQ9P0W2 317 aa16.18■□□□□ 0.18
HDAC3-213ENST00000492506 EIF5BO60841 1220 aaKnown RBP16.17■□□□□ 0.18
HDAC3-213ENST00000492506 HOXA7P31268 230 aaPredicted RBP16.17■□□□□ 0.18
HDAC3-213ENST00000492506 SLFN5Q08AF3 891 aa16.17■□□□□ 0.18
HDAC3-213ENST00000492506 TFCP2Q12800 502 aa16.17■□□□□ 0.18
HDAC3-213ENST00000492506 POTEEQ6S8J3 1075 aa16.17■□□□□ 0.18
HDAC3-213ENST00000492506 TBC1D9Q6ZT07 1266 aa16.17■□□□□ 0.18
HDAC3-213ENST00000492506 USP6NLQ92738 828 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms