RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 HTATIP2Q9BUP3 242 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 AS3MTQ9HBK9 375 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 RAI14Q9P0K7 980 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 LRP2BPQ9P2M1 347 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 PI4KBQ9UBF8 816 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 MYH13Q9UKX3 1938 aa11.22□□□□□ -0.61
HDAC3-212ENST00000492407 MKI67P46013 3256 aaKnown RBP11.21□□□□□ -0.61
HDAC3-212ENST00000492407 PNMA6EA0A0J9YXQ4 647 aa11.21□□□□□ -0.61
HDAC3-212ENST00000492407 USP17L5A8MUK1 530 aa11.21□□□□□ -0.61
HDAC3-212ENST00000492407 CCL5P13501 91 aa11.21□□□□□ -0.61
HDAC3-212ENST00000492407 CAP2P40123 477 aa11.21□□□□□ -0.61
HDAC3-212ENST00000492407 MCAMP43121 646 aa11.21□□□□□ -0.61
HDAC3-212ENST00000492407 ATP8B2P98198 1209 aa11.21□□□□□ -0.61
HDAC3-212ENST00000492407 FAM110CQ1W6H9 321 aa11.21□□□□□ -0.61
HDAC3-212ENST00000492407 METTL16Q86W50 562 aaKnown RBP11.21□□□□□ -0.61
HDAC3-212ENST00000492407 ZNF280CQ8ND82 737 aa11.21□□□□□ -0.61
HDAC3-212ENST00000492407 FRAT1Q92837 279 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-212ENST00000492407 COA7Q96BR5 231 aa11.21□□□□□ -0.61
HDAC3-212ENST00000492407 PKNOX2Q96KN3 472 aa11.21□□□□□ -0.61
HDAC3-212ENST00000492407 WDR18Q9BV38 432 aa11.21□□□□□ -0.61
HDAC3-212ENST00000492407 RNF208Q9H0X6 261 aa11.21□□□□□ -0.61
HDAC3-212ENST00000492407 BIN2Q9UBW5 565 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-212ENST00000492407 NOP58Q9Y2X3 529 aaKnown RBP11.21□□□□□ -0.61
HDAC3-212ENST00000492407 KIAA0100Q14667 2235 aaKnown RBP11.21□□□□□ -0.62
HDAC3-212ENST00000492407 TRIM75PA6NK02 468 aa11.2□□□□□ -0.62
HDAC3-212ENST00000492407 TNPO2O14787 897 aaKnown RBP11.2□□□□□ -0.62
HDAC3-212ENST00000492407 ADCY3O60266 1144 aa11.2□□□□□ -0.62
HDAC3-212ENST00000492407 BCAR3O75815 825 aa11.2□□□□□ -0.62
HDAC3-212ENST00000492407 SGPL1O95470 568 aa11.2□□□□□ -0.62
HDAC3-212ENST00000492407 FLT3LGP49771 235 aa11.2□□□□□ -0.62
HDAC3-212ENST00000492407 MTFR1Q15390 333 aa11.2□□□□□ -0.62
HDAC3-212ENST00000492407 TNNI3KQ59H18 835 aa11.2□□□□□ -0.62
HDAC3-212ENST00000492407 TBC1D9Q6ZT07 1266 aa11.2□□□□□ -0.62
HDAC3-212ENST00000492407 TEX11Q8IYF3 940 aa11.2□□□□□ -0.62
HDAC3-212ENST00000492407 SHISA4Q96DD7 197 aa11.2□□□□□ -0.62
HDAC3-212ENST00000492407 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.2□□□□□ -0.62
HDAC3-212ENST00000492407 FPGT-TNNI3KV9GXZ4 949 aa11.2□□□□□ -0.62
HDAC3-212ENST00000492407 C19orf81C9J6K1 198 aa11.19□□□□□ -0.62
HDAC3-212ENST00000492407 ASNSP08243 561 aa11.19□□□□□ -0.62
HDAC3-212ENST00000492407 HOXA7P31268 230 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-212ENST00000492407 SPP2Q13103 211 aa11.19□□□□□ -0.62
HDAC3-212ENST00000492407 TTC39AQ5SRH9 613 aa11.19□□□□□ -0.62
HDAC3-212ENST00000492407 NAA16Q6N069 864 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-212ENST00000492407 PI16Q6UXB8 463 aa11.19□□□□□ -0.62
HDAC3-212ENST00000492407 U2AF1L4Q8WU68 220 aaKnown RBP11.19□□□□□ -0.62
HDAC3-212ENST00000492407 GTF3C3Q9Y5Q9 886 aa11.19□□□□□ -0.62
HDAC3-212ENST00000492407 NR2E3Q9Y5X4 410 aa11.19□□□□□ -0.62
HDAC3-212ENST00000492407 BRCA2P51587 3418 aa11.19□□□□□ -0.62
HDAC3-212ENST00000492407 MYH2Q9UKX2 1941 aa11.18□□□□□ -0.62
HDAC3-212ENST00000492407 H0YGN5 161 aa11.18□□□□□ -0.62
HDAC3-212ENST00000492407 SURF6O75683 361 aaKnown RBP11.18□□□□□ -0.62
HDAC3-212ENST00000492407 MYCP01106 439 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-212ENST00000492407 FXR1P51114 621 aaKnown RBP eCLIP11.18□□□□□ -0.62
HDAC3-212ENST00000492407 TMEM57Q8N5G2 664 aa11.18□□□□□ -0.62
HDAC3-212ENST00000492407 SH3RF3Q8TEJ3 882 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-212ENST00000492407 GTF3C2Q8WUA4 911 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-212ENST00000492407 DPF3Q92784 378 aa11.18□□□□□ -0.62
HDAC3-212ENST00000492407 CLUAP1Q96AJ1 413 aa11.18□□□□□ -0.62
HDAC3-212ENST00000492407 PAK6Q9NQU5 681 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-212ENST00000492407 MORF4L1Q9UBU8 362 aa11.18□□□□□ -0.62
HDAC3-212ENST00000492407 GABRQQ9UN88 632 aa11.18□□□□□ -0.62
HDAC3-212ENST00000492407 COLQQ9Y215 455 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-212ENST00000492407 DOCK2Q92608 1830 aa11.18□□□□□ -0.62
HDAC3-212ENST00000492407 ZBTB7BO15156 539 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-212ENST00000492407 CYP2E1P05181 493 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-212ENST00000492407 BACE1P56817 501 aa11.17□□□□□ -0.62
HDAC3-212ENST00000492407 OS9Q13438 667 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-212ENST00000492407 TREML2Q5T2D2 321 aa11.17□□□□□ -0.62
HDAC3-212ENST00000492407 ANKRD13CQ8N6S4 541 aa11.17□□□□□ -0.62
HDAC3-212ENST00000492407 ANKLE1Q8NAG6 615 aa11.17□□□□□ -0.62
HDAC3-212ENST00000492407 CRISPLD2Q9H0B8 497 aa11.17□□□□□ -0.62
HDAC3-212ENST00000492407 UNC93B1Q9H1C4 597 aa11.17□□□□□ -0.62
HDAC3-212ENST00000492407 AK9Q5TCS8 1911 aa11.16□□□□□ -0.62
HDAC3-212ENST00000492407 A0A1W2PPC1 479 aa11.16□□□□□ -0.62
HDAC3-212ENST00000492407 FARP2O94887 1054 aaPredicted RBP11.16□□□□□ -0.62
HDAC3-212ENST00000492407 INHAP05111 366 aa11.16□□□□□ -0.62
HDAC3-212ENST00000492407 HLA-DOAP06340 250 aa11.16□□□□□ -0.62
HDAC3-212ENST00000492407 HMGCS2P54868 508 aa11.16□□□□□ -0.62
HDAC3-212ENST00000492407 ERC1Q8IUD2 1116 aa11.16□□□□□ -0.62
HDAC3-212ENST00000492407 FTSJ3Q8IY81 847 aaKnown RBP11.16□□□□□ -0.62
HDAC3-212ENST00000492407 TRMT44Q8IYL2 757 aaKnown RBP11.16□□□□□ -0.62
HDAC3-212ENST00000492407 DBNDD2Q9BQY9 259 aa11.16□□□□□ -0.62
HDAC3-212ENST00000492407 TRIM34Q9BYJ4 488 aa11.16□□□□□ -0.62
HDAC3-212ENST00000492407 ASCC2Q9H1I8 757 aaPredicted RBP11.16□□□□□ -0.62
HDAC3-212ENST00000492407 AATFQ9NY61 560 aaKnown RBP eCLIP11.16□□□□□ -0.62
HDAC3-212ENST00000492407 TMOD4Q9NZQ9 345 aa11.16□□□□□ -0.62
HDAC3-212ENST00000492407 DOCK1Q14185 1865 aa11.16□□□□□ -0.62
HDAC3-212ENST00000492407 FLT1P17948 1338 aa11.15□□□□□ -0.62
HDAC3-212ENST00000492407 FAM196BA6NMK8 535 aa11.15□□□□□ -0.62
HDAC3-212ENST00000492407 USP17L10C9JJH3 530 aa11.15□□□□□ -0.62
HDAC3-212ENST00000492407 TFRCP02786 760 aaKnown RBP11.15□□□□□ -0.62
HDAC3-212ENST00000492407 HMGCRP04035 888 aa11.15□□□□□ -0.62
HDAC3-212ENST00000492407 SLURP2P0DP57 97 aa11.15□□□□□ -0.62
HDAC3-212ENST00000492407 XRCC5P13010 732 aaKnown RBP11.15□□□□□ -0.62
HDAC3-212ENST00000492407 PDE4CQ08493 712 aa11.15□□□□□ -0.62
HDAC3-212ENST00000492407 RRP1BQ14684 758 aaKnown RBP11.15□□□□□ -0.62
HDAC3-212ENST00000492407 HSP90AB4PQ58FF6 505 aa11.15□□□□□ -0.62
HDAC3-212ENST00000492407 CRACR2BQ8N4Y2 399 aaPredicted RBP11.15□□□□□ -0.62
HDAC3-212ENST00000492407 TGFBRAP1Q8WUH2 860 aa11.15□□□□□ -0.62
HDAC3-212ENST00000492407 EHD4Q9H223 541 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms