RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 TNKSO95271 1327 aa17.37■□□□□ 0.37
TNFRSF1B-203ENST00000492361 TSPY2A6NKD2 308 aa17.37■□□□□ 0.37
TNFRSF1B-203ENST00000492361 USP17L12C9JPN9 530 aa17.37■□□□□ 0.37
TNFRSF1B-203ENST00000492361 USP17L21D6R901 530 aa17.37■□□□□ 0.37
TNFRSF1B-203ENST00000492361 ATL3Q6DD88 541 aa17.37■□□□□ 0.37
TNFRSF1B-203ENST00000492361 STX8Q9UNK0 236 aa17.37■□□□□ 0.37
TNFRSF1B-203ENST00000492361 PLEKHA8P1O95397 391 aa17.37■□□□□ 0.37
TNFRSF1B-203ENST00000492361 CATIPQ7Z7H3 387 aa17.37■□□□□ 0.37
TNFRSF1B-203ENST00000492361 TOPAZ1Q8N9V7 1692 aa17.36■□□□□ 0.37
TNFRSF1B-203ENST00000492361 TRIM75PA6NK02 468 aa17.36■□□□□ 0.37
TNFRSF1B-203ENST00000492361 TMCO3Q6UWJ1 677 aa17.36■□□□□ 0.37
TNFRSF1B-203ENST00000492361 FANCBQ8NB91 859 aa17.36■□□□□ 0.37
TNFRSF1B-203ENST00000492361 TMEM87BQ96K49 555 aa17.36■□□□□ 0.37
TNFRSF1B-203ENST00000492361 KRT23Q9C075 422 aa17.36■□□□□ 0.37
TNFRSF1B-203ENST00000492361 GTF2F1P35269 517 aaKnown RBP eCLIP17.36■□□□□ 0.377e-7■■■■■ 41.3
TNFRSF1B-203ENST00000492361 CHRNDQ07001 517 aa17.36■□□□□ 0.37
TNFRSF1B-203ENST00000492361 CCDC152Q4G0S7 254 aa17.36■□□□□ 0.37
TNFRSF1B-203ENST00000492361 IQCA1Q86XH1 822 aa17.36■□□□□ 0.37
TNFRSF1B-203ENST00000492361 ZNF397Q8NF99 534 aaPredicted RBP17.36■□□□□ 0.37
TNFRSF1B-203ENST00000492361 FMR1Q06787 632 aaKnown RBP eCLIP17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 KIF4BQ2VIQ3 1234 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 RRAGBQ5VZM2 374 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 WASF1Q92558 559 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 NALCNQ8IZF0 1738 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 SAMD1Q6SPF0 538 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 SARM1Q6SZW1 724 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 IGDCC4Q8TDY8 1250 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 ESR2Q92731 530 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 SLC4A9Q96Q91 983 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 CPVLQ9H3G5 476 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 BRMS1Q9HCU9 246 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 GSG1L2A8MUP6 293 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 N4BP3O15049 544 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 ZSCAN20P17040 1043 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 EVCP57679 992 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 ATP2B2Q01814 1243 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 PPARAQ07869 468 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 CAVIN4Q5BKX8 364 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 KRT222Q8N1A0 295 aa17.35■□□□□ 0.37
TNFRSF1B-203ENST00000492361 DNA2P51530 1060 aa17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 MCM6Q14566 821 aa17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 CTCFLQ8NI51 663 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 GPKOWQ92917 476 aaPredicted RBP eCLIP17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 ERO1AQ96HE7 468 aa17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 NUP88Q99567 741 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 GNL3LQ9NVN8 582 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 OGFRQ9NZT2 677 aa17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 MAN1B1Q9UKM7 699 aa17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 CUTAO60888 179 aa17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 GPR101Q96P66 508 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 CACNA1FO60840 1977 aa17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 CCDC196A0A1B0GTZ2 297 aa17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 TEX33O43247 280 aa17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 PHACTR2O75167 634 aa17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 UBE3CQ15386 1083 aa17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 ARGLU1Q9NWB6 273 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 CTNND2Q9UQB3 1225 aa17.34■□□□□ 0.37
TNFRSF1B-203ENST00000492361 RHOXF2BP0C7M4 288 aa17.33■□□□□ 0.37
TNFRSF1B-203ENST00000492361 CYP2D6P10635 497 aa17.33■□□□□ 0.37
TNFRSF1B-203ENST00000492361 CYP19A1P11511 503 aaPredicted RBP17.33■□□□□ 0.37
TNFRSF1B-203ENST00000492361 GYS2P54840 703 aa17.33■□□□□ 0.37
TNFRSF1B-203ENST00000492361 FKBP15Q5T1M5 1219 aa17.33■□□□□ 0.37
TNFRSF1B-203ENST00000492361 TOGARAM2Q6ZUX3 1019 aa17.33■□□□□ 0.37
TNFRSF1B-203ENST00000492361 RHOXF2Q9BQY4 288 aa17.33■□□□□ 0.37
TNFRSF1B-203ENST00000492361 KCNQ2O43526 872 aa17.33■□□□□ 0.36
TNFRSF1B-203ENST00000492361 TPM1P09493 284 aa17.33■□□□□ 0.36
TNFRSF1B-203ENST00000492361 ANKRD18AQ8IVF6 992 aa17.33■□□□□ 0.36
TNFRSF1B-203ENST00000492361 ZCCHC17Q9NP64 241 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1B-203ENST00000492361 MCM9Q9NXL9 1143 aa17.33■□□□□ 0.36
TNFRSF1B-203ENST00000492361 SAP30BPQ9UHR5 308 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1B-203ENST00000492361 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.33■□□□□ 0.36
TNFRSF1B-203ENST00000492361 SALL1Q9NSC2 1324 aa17.33■□□□□ 0.36
TNFRSF1B-203ENST00000492361 SOWAHDA6NJG2 315 aa17.33■□□□□ 0.36
TNFRSF1B-203ENST00000492361 TFRCP02786 760 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1B-203ENST00000492361 CRKLP46109 303 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1B-203ENST00000492361 RBM6P78332 1123 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1B-203ENST00000492361 ENOX2Q16206 610 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1B-203ENST00000492361 DDB1Q16531 1140 aa17.33■□□□□ 0.36
TNFRSF1B-203ENST00000492361 FILIP1LQ4L180 1135 aa17.33■□□□□ 0.36
TNFRSF1B-203ENST00000492361 SOS2Q07890 1332 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 ETF1P62495 437 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 GDAP1L1Q96MZ0 367 aa17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 AGXT2Q9BYV1 514 aa17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 TAB2Q9NYJ8 693 aa17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 GOLGA8HP0CJ92 632 aa17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 CDC25BP30305 580 aa17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 USP5P45974 858 aa17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 PPARDQ03181 441 aa17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 NCAPHQ15003 741 aa17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 IGSF22Q8N9C0 903 aa17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 CNNM2Q9H8M5 875 aa17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 MKNK2Q9HBH9 465 aa17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 ANKIB1Q9P2G1 1089 aa17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 ZSCAN12O43309 604 aa17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 ZNF569Q5MCW4 686 aa17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 SYMPKQ92797 1274 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 RNF41Q9H4P4 317 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1B-203ENST00000492361 WDR24Q96S15 920 aa17.31■□□□□ 0.36
TNFRSF1B-203ENST00000492361 PPP2R2CQ9Y2T4 447 aa17.31■□□□□ 0.36
TNFRSF1B-203ENST00000492361 FER1L4A9Z1Z3 1794 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms