RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 LOC285556D6RIA3 1793 aa10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 CAP2P40123 477 aa10.27□□□□□ -0.77
SMARCB1-207ENST00000491967 ZAP70P43403 619 aa10.27□□□□□ -0.77
SMARCB1-207ENST00000491967 KIF22Q14807 665 aa10.27□□□□□ -0.77
SMARCB1-207ENST00000491967 SH3D19Q5HYK7 790 aa10.27□□□□□ -0.77
SMARCB1-207ENST00000491967 TTC39AQ5SRH9 613 aa10.27□□□□□ -0.77
SMARCB1-207ENST00000491967 NAA16Q6N069 864 aaPredicted RBP10.27□□□□□ -0.77
SMARCB1-207ENST00000491967 NBPF11Q86T75 865 aa10.27□□□□□ -0.77
SMARCB1-207ENST00000491967 FOXP4Q8IVH2 680 aaPredicted RBP10.27□□□□□ -0.77
SMARCB1-207ENST00000491967 SIRT2Q8IXJ6 389 aa10.27□□□□□ -0.77
SMARCB1-207ENST00000491967 PROCA1Q8NCQ7 364 aaPredicted RBP10.27□□□□□ -0.77
SMARCB1-207ENST00000491967 PANK1Q8TE04 598 aa10.27□□□□□ -0.77
SMARCB1-207ENST00000491967 PARK7Q99497 189 aaKnown RBP10.27□□□□□ -0.77
SMARCB1-207ENST00000491967 ZBTB40Q9NUA8 1239 aa10.27□□□□□ -0.77
SMARCB1-207ENST00000491967 TLR7Q9NYK1 1049 aaKnown RBP10.27□□□□□ -0.77
SMARCB1-207ENST00000491967 SRRDQ9UH36 339 aa10.27□□□□□ -0.77
SMARCB1-207ENST00000491967 CEP290O15078 2479 aa10.27□□□□□ -0.77
SMARCB1-207ENST00000491967 BAG3O95817 575 aa10.26□□□□□ -0.77
SMARCB1-207ENST00000491967 CYP2C8P10632 490 aa10.26□□□□□ -0.77
SMARCB1-207ENST00000491967 MS4A1P11836 297 aa10.26□□□□□ -0.77
SMARCB1-207ENST00000491967 EN2P19622 333 aaPredicted RBP10.26□□□□□ -0.77
SMARCB1-207ENST00000491967 OSBPP22059 807 aa10.26□□□□□ -0.77
SMARCB1-207ENST00000491967 PSMC4P43686 418 aa10.26□□□□□ -0.77
SMARCB1-207ENST00000491967 SLC9C1Q4G0N8 1177 aa10.26□□□□□ -0.77
SMARCB1-207ENST00000491967 ERC1Q8IUD2 1116 aa10.26□□□□□ -0.77
SMARCB1-207ENST00000491967 RPAP2Q8IXW5 612 aaPredicted RBP10.26□□□□□ -0.77
SMARCB1-207ENST00000491967 TEX11Q8IYF3 940 aa10.26□□□□□ -0.77
SMARCB1-207ENST00000491967 WDR18Q9BV38 432 aa10.26□□□□□ -0.77
SMARCB1-207ENST00000491967 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.26□□□□□ -0.77
SMARCB1-207ENST00000491967 GINM1Q9NU53 330 aa10.26□□□□□ -0.77
SMARCB1-207ENST00000491967 AATFQ9NY61 560 aaKnown RBP eCLIP10.26□□□□□ -0.77
SMARCB1-207ENST00000491967 AGTPBP1Q9UPW5 1226 aa10.26□□□□□ -0.77
SMARCB1-207ENST00000491967 MYH1P12882 1939 aa10.25□□□□□ -0.77
SMARCB1-207ENST00000491967 FAM196BA6NMK8 535 aa10.25□□□□□ -0.77
SMARCB1-207ENST00000491967 HOXD10P28358 340 aa10.25□□□□□ -0.77
SMARCB1-207ENST00000491967 JAG1P78504 1218 aa10.25□□□□□ -0.77
SMARCB1-207ENST00000491967 OS9Q13438 667 aaPredicted RBP10.25□□□□□ -0.77
SMARCB1-207ENST00000491967 HSP90AB4PQ58FF6 505 aa10.25□□□□□ -0.77
SMARCB1-207ENST00000491967 CERS3Q8IU89 383 aa10.25□□□□□ -0.77
SMARCB1-207ENST00000491967 ZNF280CQ8ND82 737 aa10.25□□□□□ -0.77
SMARCB1-207ENST00000491967 CCDC8Q9H0W5 538 aaPredicted RBP10.25□□□□□ -0.77
SMARCB1-207ENST00000491967 DNAJC18Q9H819 358 aa10.25□□□□□ -0.77
SMARCB1-207ENST00000491967 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.25□□□□□ -0.77
SMARCB1-207ENST00000491967 FLT1P17948 1338 aa10.25□□□□□ -0.77
SMARCB1-207ENST00000491967 TRIM75PA6NK02 468 aa10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 USP17L5A8MUK1 530 aa10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 HOXA7P31268 230 aaPredicted RBP10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 FCGRTP55899 365 aa10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 SPP2Q13103 211 aa10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 IRF5Q13568 498 aa10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 TREML2Q5T2D2 321 aa10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 UBE2Q1Q7Z7E8 422 aa10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 CCDC84Q86UT8 332 aaPredicted RBP10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 RHPN1Q8TCX5 695 aa10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 TGFBRAP1Q8WUH2 860 aa10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 NOL10Q9BSC4 688 aaKnown RBP10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 TMEM106CQ9BVX2 250 aa10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 ANTXR1Q9H6X2 564 aa10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 DDX19BQ9UMR2 479 aa10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 EXOC6BQ9Y2D4 811 aa10.24□□□□□ -0.77
SMARCB1-207ENST00000491967 ASNSP08243 561 aa10.23□□□□□ -0.77
SMARCB1-207ENST00000491967 CYP7A1P22680 504 aa10.23□□□□□ -0.77
SMARCB1-207ENST00000491967 GRK4P32298 578 aa10.23□□□□□ -0.77
SMARCB1-207ENST00000491967 FAM110CQ1W6H9 321 aa10.23□□□□□ -0.77
SMARCB1-207ENST00000491967 TATDN1Q6P1N9 297 aa10.23□□□□□ -0.77
SMARCB1-207ENST00000491967 AACSQ86V21 672 aa10.23□□□□□ -0.77
SMARCB1-207ENST00000491967 PXYLP1Q8TE99 480 aa10.23□□□□□ -0.77
SMARCB1-207ENST00000491967 SH3TC2Q8TF17 1288 aa10.23□□□□□ -0.77
SMARCB1-207ENST00000491967 RIOK1Q9BRS2 568 aaKnown RBP10.23□□□□□ -0.77
SMARCB1-207ENST00000491967 PALD1Q9ULE6 856 aa10.23□□□□□ -0.77
SMARCB1-207ENST00000491967 DDX60LQ5H9U9 1706 aaKnown RBP10.22□□□□□ -0.77
SMARCB1-207ENST00000491967 C19orf81C9J6K1 198 aa10.22□□□□□ -0.77
SMARCB1-207ENST00000491967 FMNL1O95466 1100 aaPredicted RBP10.22□□□□□ -0.77
SMARCB1-207ENST00000491967 GCLCP48506 637 aaPredicted RBP10.22□□□□□ -0.77
SMARCB1-207ENST00000491967 BACE1P56817 501 aa10.22□□□□□ -0.77
SMARCB1-207ENST00000491967 DYNLL1P63167 89 aaKnown RBP10.22□□□□□ -0.77
SMARCB1-207ENST00000491967 PRKCZQ05513 592 aa10.22□□□□□ -0.77
SMARCB1-207ENST00000491967 PDE3AQ14432 1141 aa10.22□□□□□ -0.77
SMARCB1-207ENST00000491967 GADL1Q6ZQY3 521 aa10.22□□□□□ -0.77
SMARCB1-207ENST00000491967 MAPKAPK5Q8IW41 473 aa10.22□□□□□ -0.77
SMARCB1-207ENST00000491967 SHISA4Q96DD7 197 aa10.22□□□□□ -0.77
SMARCB1-207ENST00000491967 EHD4Q9H223 541 aa10.22□□□□□ -0.77
SMARCB1-207ENST00000491967 MORF4L1Q9UBU8 362 aa10.22□□□□□ -0.77
SMARCB1-207ENST00000491967 GABRQQ9UN88 632 aa10.22□□□□□ -0.77
SMARCB1-207ENST00000491967 MYPNQ86TC9 1320 aa10.22□□□□□ -0.77
SMARCB1-207ENST00000491967 PLXNB2O15031 1838 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 TCRBV5S4A2TA0A5A2 114 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 RAB11FIP3O75154 756 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 IDH1O75874 414 aaKnown RBP10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 GJB1P08034 283 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 CAPN2P17655 700 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 GJA8P48165 433 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 HMGCS2P54868 508 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 MAP3K12Q12852 859 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 TTF1Q15361 905 aaPredicted RBP10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 MTFR1Q15390 333 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 MAGEB6Q8N7X4 407 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 SLAIN1Q8ND83 568 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 RAET1EQ8TD07 263 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms