RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 SPP2Q13103 211 aa10.15□□□□□ -0.78
APP-216ENST00000491395 SLC4A8Q2Y0W8 1093 aa10.15□□□□□ -0.78
APP-216ENST00000491395 TGFBRAP1Q8WUH2 860 aa10.15□□□□□ -0.78
APP-216ENST00000491395 EXOC6BQ9Y2D4 811 aa10.15□□□□□ -0.78
APP-216ENST00000491395 NDUFB9Q9Y6M9 179 aa10.15□□□□□ -0.78
APP-216ENST00000491395 LAMB1P07942 1786 aa10.15□□□□□ -0.78
APP-216ENST00000491395 HTTP42858 3142 aa10.14□□□□□ -0.79
APP-216ENST00000491395 JAG1P78504 1218 aa10.14□□□□□ -0.79
APP-216ENST00000491395 MTFR1Q15390 333 aa10.14□□□□□ -0.79
APP-216ENST00000491395 TREML2Q5T2D2 321 aa10.14□□□□□ -0.79
APP-216ENST00000491395 ZNF280CQ8ND82 737 aa10.14□□□□□ -0.79
APP-216ENST00000491395 RAET1EQ8TD07 263 aa10.14□□□□□ -0.79
APP-216ENST00000491395 PI4KBQ9UBF8 816 aa10.14□□□□□ -0.79
APP-216ENST00000491395 SLC45A1Q9Y2W3 748 aa10.14□□□□□ -0.79
APP-216ENST00000491395 MYPNQ86TC9 1320 aa10.13□□□□□ -0.79
APP-216ENST00000491395 USP17L5A8MUK1 530 aa10.13□□□□□ -0.79
APP-216ENST00000491395 IDH1O75874 414 aaKnown RBP10.13□□□□□ -0.79
APP-216ENST00000491395 PLCG2P16885 1265 aa10.13□□□□□ -0.79
APP-216ENST00000491395 CYP7A1P22680 504 aa10.13□□□□□ -0.79
APP-216ENST00000491395 GRK4P32298 578 aa10.13□□□□□ -0.79
APP-216ENST00000491395 CAP2P40123 477 aa10.13□□□□□ -0.79
APP-216ENST00000491395 FCGRTP55899 365 aa10.13□□□□□ -0.79
APP-216ENST00000491395 PRKCZQ05513 592 aa10.13□□□□□ -0.79
APP-216ENST00000491395 AACSQ86V21 672 aa10.13□□□□□ -0.79
APP-216ENST00000491395 SMCR8Q8TEV9 937 aaPredicted RBP10.13□□□□□ -0.79
APP-216ENST00000491395 DHX36Q9H2U1 1008 aaKnown RBP10.13□□□□□ -0.79
APP-216ENST00000491395 ANTXR1Q9H6X2 564 aa10.13□□□□□ -0.79
APP-216ENST00000491395 SAP30BPQ9UHR5 308 aaKnown RBP10.13□□□□□ -0.79
APP-216ENST00000491395 HERC5Q9UII4 1024 aaKnown RBP10.13□□□□□ -0.79
APP-216ENST00000491395 PALD1Q9ULE6 856 aa10.13□□□□□ -0.79
APP-216ENST00000491395 GABRQQ9UN88 632 aa10.13□□□□□ -0.79
APP-216ENST00000491395 AGTPBP1Q9UPW5 1226 aa10.13□□□□□ -0.79
APP-216ENST00000491395 MYH2Q9UKX2 1941 aa10.13□□□□□ -0.79
APP-216ENST00000491395 MYH13Q9UKX3 1938 aa10.13□□□□□ -0.79
APP-216ENST00000491395 FLT1P17948 1338 aa10.12□□□□□ -0.79
APP-216ENST00000491395 HMGCS2P54868 508 aa10.12□□□□□ -0.79
APP-216ENST00000491395 SHROOM1Q2M3G4 852 aaPredicted RBP10.12□□□□□ -0.79
APP-216ENST00000491395 METTL16Q86W50 562 aaKnown RBP10.12□□□□□ -0.79
APP-216ENST00000491395 ERC1Q8IUD2 1116 aa10.12□□□□□ -0.79
APP-216ENST00000491395 FOXP4Q8IVH2 680 aaPredicted RBP10.12□□□□□ -0.79
APP-216ENST00000491395 ANKRD13CQ8N6S4 541 aa10.12□□□□□ -0.79
APP-216ENST00000491395 MAGEB6Q8N7X4 407 aa10.12□□□□□ -0.79
APP-216ENST00000491395 MIGA1Q8NAN2 632 aa10.12□□□□□ -0.79
APP-216ENST00000491395 RHPN1Q8TCX5 695 aa10.12□□□□□ -0.79
APP-216ENST00000491395 DNAJC18Q9H819 358 aa10.12□□□□□ -0.79
APP-216ENST00000491395 IL1RAPL2Q9NP60 686 aa10.12□□□□□ -0.79
APP-216ENST00000491395 BIN2Q9UBW5 565 aaPredicted RBP10.12□□□□□ -0.79
APP-216ENST00000491395 COG6Q9Y2V7 657 aa10.12□□□□□ -0.79
APP-216ENST00000491395 AK9Q5TCS8 1911 aa10.11□□□□□ -0.79
APP-216ENST00000491395 COL2A1P02458 1487 aaPredicted RBP10.11□□□□□ -0.79
APP-216ENST00000491395 APBB1O00213 710 aa10.11□□□□□ -0.79
APP-216ENST00000491395 TNPO2O14787 897 aaKnown RBP10.11□□□□□ -0.79
APP-216ENST00000491395 IGSF3O75054 1194 aa10.11□□□□□ -0.79
APP-216ENST00000491395 GDF11O95390 407 aa10.11□□□□□ -0.79
APP-216ENST00000491395 MS4A1P11836 297 aa10.11□□□□□ -0.79
APP-216ENST00000491395 CCL5P13501 91 aa10.11□□□□□ -0.79
APP-216ENST00000491395 FLT3LGP49771 235 aa10.11□□□□□ -0.79
APP-216ENST00000491395 SH3D19Q5HYK7 790 aa10.11□□□□□ -0.79
APP-216ENST00000491395 SIRT2Q8IXJ6 389 aa10.11□□□□□ -0.79
APP-216ENST00000491395 CRACR2BQ8N4Y2 399 aaPredicted RBP10.11□□□□□ -0.79
APP-216ENST00000491395 PROCA1Q8NCQ7 364 aaPredicted RBP10.11□□□□□ -0.79
APP-216ENST00000491395 WDR18Q9BV38 432 aa10.11□□□□□ -0.79
APP-216ENST00000491395 TRIM34Q9BYJ4 488 aa10.11□□□□□ -0.79
APP-216ENST00000491395 BCL11AQ9H165 835 aa10.11□□□□□ -0.79
APP-216ENST00000491395 AS3MTQ9HBK9 375 aa10.11□□□□□ -0.79
APP-216ENST00000491395 ZSWIM8A7E2V4 1837 aa10.1□□□□□ -0.79
APP-216ENST00000491395 ADCY3O60266 1144 aa10.1□□□□□ -0.79
APP-216ENST00000491395 ELNP15502 786 aa10.1□□□□□ -0.79
APP-216ENST00000491395 MTMR2Q13614 643 aa10.1□□□□□ -0.79
APP-216ENST00000491395 HSP90AB4PQ58FF6 505 aa10.1□□□□□ -0.79
APP-216ENST00000491395 SHISA4Q96DD7 197 aa10.1□□□□□ -0.79
APP-216ENST00000491395 TBC1D2Q9BYX2 928 aa10.1□□□□□ -0.79
APP-216ENST00000491395 RNF208Q9H0X6 261 aa10.1□□□□□ -0.79
APP-216ENST00000491395 ASCC2Q9H1I8 757 aaPredicted RBP10.1□□□□□ -0.79
APP-216ENST00000491395 ZBTB40Q9NUA8 1239 aa10.1□□□□□ -0.79
APP-216ENST00000491395 PNMA3Q9UL41 463 aa10.1□□□□□ -0.79
APP-216ENST00000491395 PEX10O60683 326 aa10.09□□□□□ -0.79
APP-216ENST00000491395 HLA-DOAP06340 250 aa10.09□□□□□ -0.79
APP-216ENST00000491395 GJB1P08034 283 aa10.09□□□□□ -0.79
APP-216ENST00000491395 ASNSP08243 561 aa10.09□□□□□ -0.79
APP-216ENST00000491395 USP5P45974 858 aa10.09□□□□□ -0.79
APP-216ENST00000491395 GCLCP48506 637 aaPredicted RBP10.09□□□□□ -0.79
APP-216ENST00000491395 BACE1P56817 501 aa10.09□□□□□ -0.79
APP-216ENST00000491395 UBXN2AP68543 259 aa10.09□□□□□ -0.79
APP-216ENST00000491395 MAP3K12Q12852 859 aa10.09□□□□□ -0.79
APP-216ENST00000491395 PABPC4Q13310 644 aaKnown RBP eCLIP10.09□□□□□ -0.79
APP-216ENST00000491395 RPAP2Q8IXW5 612 aaPredicted RBP10.09□□□□□ -0.79
APP-216ENST00000491395 SLAIN1Q8ND83 568 aa10.09□□□□□ -0.79
APP-216ENST00000491395 P2RX7Q99572 595 aaKnown RBP10.09□□□□□ -0.79
APP-216ENST00000491395 UNC93B1Q9H1C4 597 aa10.09□□□□□ -0.79
APP-216ENST00000491395 TAOK2Q9UL54 1235 aa10.09□□□□□ -0.79
APP-216ENST00000491395 ZBTB21Q9ULJ3 1066 aa10.09□□□□□ -0.79
APP-216ENST00000491395 GH2P01242 217 aa10.08□□□□□ -0.8
APP-216ENST00000491395 GJA8P48165 433 aa10.08□□□□□ -0.8
APP-216ENST00000491395 IRF5Q13568 498 aa10.08□□□□□ -0.8
APP-216ENST00000491395 FAM110CQ1W6H9 321 aa10.08□□□□□ -0.8
APP-216ENST00000491395 TATDN1Q6P1N9 297 aa10.08□□□□□ -0.8
APP-216ENST00000491395 CLASRPQ8N2M8 674 aaKnown RBP10.08□□□□□ -0.8
APP-216ENST00000491395 NKX2-3Q8TAU0 364 aa10.08□□□□□ -0.8
APP-216ENST00000491395 COA7Q96BR5 231 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms