RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 TLR7Q9NYK1 1049 aaKnown RBP19.29■□□□□ 0.68
SMPD4-220ENST00000491319 SRRDQ9UH36 339 aa19.29■□□□□ 0.68
SMPD4-220ENST00000491319 CYP2E1P05181 493 aaPredicted RBP19.28■□□□□ 0.68
SMPD4-220ENST00000491319 OSBPP22059 807 aa19.28■□□□□ 0.68
SMPD4-220ENST00000491319 PRMT2P55345 433 aa19.28■□□□□ 0.68
SMPD4-220ENST00000491319 NAA16Q6N069 864 aaPredicted RBP19.28■□□□□ 0.68
SMPD4-220ENST00000491319 ADGRA1Q86SQ6 560 aa19.28■□□□□ 0.68
SMPD4-220ENST00000491319 AATFQ9NY61 560 aaKnown RBP eCLIP19.28■□□□□ 0.68
SMPD4-220ENST00000491319 DBNLQ9UJU6 430 aaKnown RBP19.28■□□□□ 0.68
SMPD4-220ENST00000491319 NOP58Q9Y2X3 529 aaKnown RBP19.28■□□□□ 0.68
SMPD4-220ENST00000491319 FMNL1O95466 1100 aaPredicted RBP19.27■□□□□ 0.68
SMPD4-220ENST00000491319 SLC4A8Q2Y0W8 1093 aa19.27■□□□□ 0.68
SMPD4-220ENST00000491319 NOL10Q9BSC4 688 aaKnown RBP19.27■□□□□ 0.68
SMPD4-220ENST00000491319 MYPNQ86TC9 1320 aa19.26■□□□□ 0.67
SMPD4-220ENST00000491319 ZAP70P43403 619 aa19.26■□□□□ 0.67
SMPD4-220ENST00000491319 RRP1BQ14684 758 aaKnown RBP19.26■□□□□ 0.67
SMPD4-220ENST00000491319 CEP85Q6P2H3 762 aa19.26■□□□□ 0.67
SMPD4-220ENST00000491319 PANK1Q8TE04 598 aa19.26■□□□□ 0.67
SMPD4-220ENST00000491319 CCDC8Q9H0W5 538 aaPredicted RBP19.26■□□□□ 0.67
SMPD4-220ENST00000491319 PIH1D3Q9NQM4 214 aaKnown RBP19.26■□□□□ 0.67
SMPD4-220ENST00000491319 NAV1Q8NEY1 1877 aa19.25■□□□□ 0.67
SMPD4-220ENST00000491319 EAF2Q96CJ1 260 aaPredicted RBP19.25■□□□□ 0.67
SMPD4-220ENST00000491319 ZNF512BQ96KM6 892 aaPredicted RBP19.25■□□□□ 0.67
SMPD4-220ENST00000491319 SLC45A1Q9Y2W3 748 aa19.25■□□□□ 0.67
SMPD4-220ENST00000491319 BAG3O95817 575 aa19.24■□□□□ 0.67
SMPD4-220ENST00000491319 HOXD10P28358 340 aa19.24■□□□□ 0.67
SMPD4-220ENST00000491319 FCGRTP55899 365 aa19.24■□□□□ 0.67
SMPD4-220ENST00000491319 PRKCZQ05513 592 aa19.24■□□□□ 0.67
SMPD4-220ENST00000491319 MTFR1Q15390 333 aa19.24■□□□□ 0.67
SMPD4-220ENST00000491319 TREML2Q5T2D2 321 aa19.24■□□□□ 0.67
SMPD4-220ENST00000491319 MAPKAPK5Q8IW41 473 aa19.24■□□□□ 0.67
SMPD4-220ENST00000491319 RAET1EQ8TD07 263 aa19.24■□□□□ 0.67
SMPD4-220ENST00000491319 AGTPBP1Q9UPW5 1226 aa19.24■□□□□ 0.67
SMPD4-220ENST00000491319 DDX60LQ5H9U9 1706 aaKnown RBP19.24■□□□□ 0.67
SMPD4-220ENST00000491319 FLT1P17948 1338 aa19.24■□□□□ 0.67
SMPD4-220ENST00000491319 PLCG2P16885 1265 aa19.23■□□□□ 0.67
SMPD4-220ENST00000491319 CAP2P40123 477 aa19.23■□□□□ 0.67
SMPD4-220ENST00000491319 PPP4CP60510 307 aa19.23■□□□□ 0.67
SMPD4-220ENST00000491319 SMCR8Q8TEV9 937 aaPredicted RBP19.23■□□□□ 0.67
SMPD4-220ENST00000491319 TGFBRAP1Q8WUH2 860 aa19.23■□□□□ 0.67
SMPD4-220ENST00000491319 HERC5Q9UII4 1024 aaKnown RBP19.23■□□□□ 0.67
SMPD4-220ENST00000491319 EXOC6BQ9Y2D4 811 aa19.23■□□□□ 0.67
SMPD4-220ENST00000491319 GRK4P32298 578 aa19.22■□□□□ 0.67
SMPD4-220ENST00000491319 SPP2Q13103 211 aa19.22■□□□□ 0.67
SMPD4-220ENST00000491319 PROCA1Q8NCQ7 364 aaPredicted RBP19.22■□□□□ 0.67
SMPD4-220ENST00000491319 ZNF280CQ8ND82 737 aa19.22■□□□□ 0.67
SMPD4-220ENST00000491319 DNAJC18Q9H819 358 aa19.22■□□□□ 0.67
SMPD4-220ENST00000491319 PI4KBQ9UBF8 816 aa19.22■□□□□ 0.67
SMPD4-220ENST00000491319 GABRQQ9UN88 632 aa19.22■□□□□ 0.67
SMPD4-220ENST00000491319 NDUFB9Q9Y6M9 179 aa19.22■□□□□ 0.67
SMPD4-220ENST00000491319 PLXNB2O15031 1838 aa19.21■□□□□ 0.67
SMPD4-220ENST00000491319 HMGCS2P54868 508 aa19.21■□□□□ 0.67
SMPD4-220ENST00000491319 DYNLL1P63167 89 aaKnown RBP19.21■□□□□ 0.67
SMPD4-220ENST00000491319 DHX36Q9H2U1 1008 aaKnown RBP19.21■□□□□ 0.67
SMPD4-220ENST00000491319 MYH7P12883 1935 aa19.21■□□□□ 0.67
SMPD4-220ENST00000491319 MYH8P13535 1937 aa19.21■□□□□ 0.67
SMPD4-220ENST00000491319 IDH1O75874 414 aaKnown RBP19.2■□□□□ 0.66
SMPD4-220ENST00000491319 CYP7A1P22680 504 aa19.2■□□□□ 0.66
SMPD4-220ENST00000491319 AACSQ86V21 672 aa19.2■□□□□ 0.66
SMPD4-220ENST00000491319 ANKRD13CQ8N6S4 541 aa19.2■□□□□ 0.66
SMPD4-220ENST00000491319 SHISA4Q96DD7 197 aa19.2■□□□□ 0.66
SMPD4-220ENST00000491319 TBC1D2Q9BYX2 928 aa19.2■□□□□ 0.66
SMPD4-220ENST00000491319 PALD1Q9ULE6 856 aa19.2■□□□□ 0.66
SMPD4-220ENST00000491319 CEP290O15078 2479 aa19.19■□□□□ 0.66
SMPD4-220ENST00000491319 USP17L5A8MUK1 530 aa19.19■□□□□ 0.66
SMPD4-220ENST00000491319 JAG1P78504 1218 aa19.19■□□□□ 0.66
SMPD4-220ENST00000491319 SHROOM1Q2M3G4 852 aaPredicted RBP19.19■□□□□ 0.66
SMPD4-220ENST00000491319 MIGA1Q8NAN2 632 aa19.19■□□□□ 0.66
SMPD4-220ENST00000491319 ANTXR1Q9H6X2 564 aa19.19■□□□□ 0.66
SMPD4-220ENST00000491319 SAP30BPQ9UHR5 308 aaKnown RBP19.19■□□□□ 0.66
SMPD4-220ENST00000491319 PNMA3Q9UL41 463 aa19.19■□□□□ 0.66
SMPD4-220ENST00000491319 TNPO2O14787 897 aaKnown RBP19.18■□□□□ 0.66
SMPD4-220ENST00000491319 IGSF3O75054 1194 aa19.18■□□□□ 0.66
SMPD4-220ENST00000491319 ERC1Q8IUD2 1116 aa19.18■□□□□ 0.66
SMPD4-220ENST00000491319 CRACR2BQ8N4Y2 399 aaPredicted RBP19.18■□□□□ 0.66
SMPD4-220ENST00000491319 MAGEB6Q8N7X4 407 aa19.18■□□□□ 0.66
SMPD4-220ENST00000491319 SLAIN1Q8ND83 568 aa19.18■□□□□ 0.66
SMPD4-220ENST00000491319 AS3MTQ9HBK9 375 aa19.18■□□□□ 0.66
SMPD4-220ENST00000491319 IL1RAPL2Q9NP60 686 aa19.18■□□□□ 0.66
SMPD4-220ENST00000491319 BIN2Q9UBW5 565 aaPredicted RBP19.18■□□□□ 0.66
SMPD4-220ENST00000491319 GDF11O95390 407 aa19.17■□□□□ 0.66
SMPD4-220ENST00000491319 CCL5P13501 91 aa19.17■□□□□ 0.66
SMPD4-220ENST00000491319 FLT3LGP49771 235 aa19.17■□□□□ 0.66
SMPD4-220ENST00000491319 MTMR2Q13614 643 aa19.17■□□□□ 0.66
SMPD4-220ENST00000491319 FAM110CQ1W6H9 321 aa19.17■□□□□ 0.66
SMPD4-220ENST00000491319 SH3D19Q5HYK7 790 aa19.17■□□□□ 0.66
SMPD4-220ENST00000491319 METTL16Q86W50 562 aaKnown RBP19.17■□□□□ 0.66
SMPD4-220ENST00000491319 ASNSP08243 561 aa19.16■□□□□ 0.66
SMPD4-220ENST00000491319 ELNP15502 786 aa19.16■□□□□ 0.66
SMPD4-220ENST00000491319 UBXN2AP68543 259 aa19.16■□□□□ 0.66
SMPD4-220ENST00000491319 TRIM34Q9BYJ4 488 aa19.16■□□□□ 0.66
SMPD4-220ENST00000491319 RNF208Q9H0X6 261 aa19.16■□□□□ 0.66
SMPD4-220ENST00000491319 ASCC2Q9H1I8 757 aaPredicted RBP19.16■□□□□ 0.66
SMPD4-220ENST00000491319 BAZ2AQ9UIF9 1905 aaKnown RBP19.15■□□□□ 0.66
SMPD4-220ENST00000491319 ADCY3O60266 1144 aa19.15■□□□□ 0.66
SMPD4-220ENST00000491319 HLA-DOAP06340 250 aa19.15■□□□□ 0.66
SMPD4-220ENST00000491319 PABPC4Q13310 644 aaKnown RBP eCLIP19.15■□□□□ 0.66
SMPD4-220ENST00000491319 FOXP4Q8IVH2 680 aaPredicted RBP19.15■□□□□ 0.66
SMPD4-220ENST00000491319 RHPN1Q8TCX5 695 aa19.15■□□□□ 0.66
SMPD4-220ENST00000491319 GCC1Q96CN9 775 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms