RNA–Protein interactions for RNA: ENST00000490869.1

UBA1-209, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2

Gene UBA1, Length 917 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-209ENST00000490869 NBPF11Q86T75 865 aa13.31□□□□□ -0.28
UBA1-209ENST00000490869 MAPKAPK5Q8IW41 473 aa13.31□□□□□ -0.28
UBA1-209ENST00000490869 RPAP2Q8IXW5 612 aaPredicted RBP13.31□□□□□ -0.28
UBA1-209ENST00000490869 RHPN1Q8TCX5 695 aa13.31□□□□□ -0.28
UBA1-209ENST00000490869 ZNF333Q96JL9 665 aa13.31□□□□□ -0.28
UBA1-209ENST00000490869 DHX36Q9H2U1 1008 aaKnown RBP13.31□□□□□ -0.28
UBA1-209ENST00000490869 IL1RAPL2Q9NP60 686 aa13.31□□□□□ -0.28
UBA1-209ENST00000490869 PI4KBQ9UBF8 816 aa13.31□□□□□ -0.28
UBA1-209ENST00000490869 HERC5Q9UII4 1024 aaKnown RBP13.31□□□□□ -0.28
UBA1-209ENST00000490869 NDUFB9Q9Y6M9 179 aa13.31□□□□□ -0.28
UBA1-209ENST00000490869 FLT1P17948 1338 aa13.31□□□□□ -0.28
UBA1-209ENST00000490869 MYO5AQ9Y4I1 1855 aaKnown RBP13.31□□□□□ -0.28
UBA1-209ENST00000490869 RBBP6Q7Z6E9 1792 aaKnown RBP13.3□□□□□ -0.28
UBA1-209ENST00000490869 APBB1O00213 710 aa13.3□□□□□ -0.28
UBA1-209ENST00000490869 HMMRO75330 724 aa13.3□□□□□ -0.28
UBA1-209ENST00000490869 FMNL1O95466 1100 aaPredicted RBP13.3□□□□□ -0.28
UBA1-209ENST00000490869 CTGFP29279 349 aa13.3□□□□□ -0.28
UBA1-209ENST00000490869 CAP2P40123 477 aa13.3□□□□□ -0.28
UBA1-209ENST00000490869 PSMC4P43686 418 aa13.3□□□□□ -0.28
UBA1-209ENST00000490869 PRMT2P55345 433 aa13.3□□□□□ -0.28
UBA1-209ENST00000490869 DYNLL1P63167 89 aaKnown RBP13.3□□□□□ -0.28
UBA1-209ENST00000490869 RRP1BQ14684 758 aaKnown RBP13.3□□□□□ -0.28
UBA1-209ENST00000490869 ANTXR1Q9H6X2 564 aa13.3□□□□□ -0.28
UBA1-209ENST00000490869 ZBTB40Q9NUA8 1239 aa13.3□□□□□ -0.28
UBA1-209ENST00000490869 SLC45A1Q9Y2W3 748 aa13.3□□□□□ -0.28
UBA1-209ENST00000490869 SIPA1L1O43166 1804 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 FOCADQ5VW36 1801 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 PTPRFP10586 1907 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 BCRP11274 1271 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 CLASRPQ8N2M8 674 aaKnown RBP13.29□□□□□ -0.28
UBA1-209ENST00000490869 MAGEB6Q8N7X4 407 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 MIGA1Q8NAN2 632 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 ZNF280CQ8ND82 737 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 SH3TC2Q8TF17 1288 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 KIF1BPQ96EK5 621 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 TRIM47Q96LD4 638 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 TMEM106CQ9BVX2 250 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 TRIM34Q9BYJ4 488 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 TBC1D2Q9BYX2 928 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 CHMP4BQ9H444 224 aaKnown RBP13.29□□□□□ -0.28
UBA1-209ENST00000490869 PALD1Q9ULE6 856 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 AGTPBP1Q9UPW5 1226 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 ATAD5Q96QE3 1844 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 CDK5RAP2Q96SN8 1893 aa13.29□□□□□ -0.28
UBA1-209ENST00000490869 USP17L5A8MUK1 530 aa13.28□□□□□ -0.28
UBA1-209ENST00000490869 HLA-DOAP06340 250 aa13.28□□□□□ -0.28
UBA1-209ENST00000490869 OSBPP22059 807 aa13.28□□□□□ -0.28
UBA1-209ENST00000490869 HOXD10P28358 340 aa13.28□□□□□ -0.28
UBA1-209ENST00000490869 FCGRTP55899 365 aa13.28□□□□□ -0.28
UBA1-209ENST00000490869 MAP3K12Q12852 859 aa13.28□□□□□ -0.28
UBA1-209ENST00000490869 SPP2Q13103 211 aa13.28□□□□□ -0.28
UBA1-209ENST00000490869 TREML2Q5T2D2 321 aa13.28□□□□□ -0.28
UBA1-209ENST00000490869 CERS3Q8IU89 383 aa13.28□□□□□ -0.28
UBA1-209ENST00000490869 FOXP4Q8IVH2 680 aaPredicted RBP13.28□□□□□ -0.28
UBA1-209ENST00000490869 SIRT2Q8IXJ6 389 aa13.28□□□□□ -0.28
UBA1-209ENST00000490869 CRACR2BQ8N4Y2 399 aaPredicted RBP13.28□□□□□ -0.28
UBA1-209ENST00000490869 PROCA1Q8NCQ7 364 aaPredicted RBP13.28□□□□□ -0.28
UBA1-209ENST00000490869 SMCR8Q8TEV9 937 aaPredicted RBP13.28□□□□□ -0.28
UBA1-209ENST00000490869 DNAJC18Q9H819 358 aa13.28□□□□□ -0.28
UBA1-209ENST00000490869 AS3MTQ9HBK9 375 aa13.28□□□□□ -0.28
UBA1-209ENST00000490869 SRRDQ9UH36 339 aa13.28□□□□□ -0.28
UBA1-209ENST00000490869 SAP30BPQ9UHR5 308 aaKnown RBP13.28□□□□□ -0.28
UBA1-209ENST00000490869 MYPNQ86TC9 1320 aa13.28□□□□□ -0.28
UBA1-209ENST00000490869 RAB11FIP3O75154 756 aa13.27□□□□□ -0.29
UBA1-209ENST00000490869 MYCP01106 439 aaPredicted RBP13.27□□□□□ -0.29
UBA1-209ENST00000490869 IFIT2P09913 472 aaKnown RBP13.27□□□□□ -0.29
UBA1-209ENST00000490869 EN2P19622 333 aaPredicted RBP13.27□□□□□ -0.29
UBA1-209ENST00000490869 USP5P45974 858 aa13.27□□□□□ -0.29
UBA1-209ENST00000490869 HMGCS2P54868 508 aa13.27□□□□□ -0.29
UBA1-209ENST00000490869 SLC4A8Q2Y0W8 1093 aa13.27□□□□□ -0.29
UBA1-209ENST00000490869 TMED8Q6PL24 325 aaPredicted RBP13.27□□□□□ -0.29
UBA1-209ENST00000490869 METTL16Q86W50 562 aaKnown RBP13.27□□□□□ -0.29
UBA1-209ENST00000490869 RAET1EQ8TD07 263 aa13.27□□□□□ -0.29
UBA1-209ENST00000490869 BCL11AQ9H165 835 aa13.27□□□□□ -0.29
UBA1-209ENST00000490869 PNMA3Q9UL41 463 aa13.27□□□□□ -0.29
UBA1-209ENST00000490869 LOC285556D6RIA3 1793 aa13.27□□□□□ -0.29
UBA1-209ENST00000490869 ASNSP08243 561 aa13.26□□□□□ -0.29
UBA1-209ENST00000490869 TTF1Q15361 905 aaPredicted RBP13.26□□□□□ -0.29
UBA1-209ENST00000490869 C20orf194Q5TEA3 1177 aa13.26□□□□□ -0.29
UBA1-209ENST00000490869 PRPF38BQ5VTL8 546 aaKnown RBP13.26□□□□□ -0.29
UBA1-209ENST00000490869 GDF11O95390 407 aa13.25□□□□□ -0.29
UBA1-209ENST00000490869 JAG1P78504 1218 aa13.25□□□□□ -0.29
UBA1-209ENST00000490869 PRKCZQ05513 592 aa13.25□□□□□ -0.29
UBA1-209ENST00000490869 PABPC4Q13310 644 aaKnown RBP eCLIP13.25□□□□□ -0.29
UBA1-209ENST00000490869 MTMR2Q13614 643 aa13.25□□□□□ -0.29
UBA1-209ENST00000490869 PDE3AQ14432 1141 aa13.25□□□□□ -0.29
UBA1-209ENST00000490869 SH3D19Q5HYK7 790 aa13.25□□□□□ -0.29
UBA1-209ENST00000490869 ANKRD13CQ8N6S4 541 aa13.25□□□□□ -0.29
UBA1-209ENST00000490869 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.25□□□□□ -0.29
UBA1-209ENST00000490869 DNAJC2Q99543 621 aaKnown RBP13.25□□□□□ -0.29
UBA1-209ENST00000490869 WDR18Q9BV38 432 aa13.25□□□□□ -0.29
UBA1-209ENST00000490869 GOLIM4O00461 696 aa13.24□□□□□ -0.29
UBA1-209ENST00000490869 GRK4P32298 578 aa13.24□□□□□ -0.29
UBA1-209ENST00000490869 SHROOM1Q2M3G4 852 aaPredicted RBP13.24□□□□□ -0.29
UBA1-209ENST00000490869 SLC9C2Q5TAH2 1124 aa13.24□□□□□ -0.29
UBA1-209ENST00000490869 RIOK1Q9BRS2 568 aaKnown RBP13.24□□□□□ -0.29
UBA1-209ENST00000490869 GINM1Q9NU53 330 aa13.24□□□□□ -0.29
UBA1-209ENST00000490869 ZBTB21Q9ULJ3 1066 aa13.24□□□□□ -0.29
UBA1-209ENST00000490869 GABRQQ9UN88 632 aa13.24□□□□□ -0.29
UBA1-209ENST00000490869 MGAMO43451 1857 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms