RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 DHX36Q9H2U1 1008 aaKnown RBP38.19■■■■□ 3.7
LDB1-204ENST00000490751 EFCC1Q9HA90 598 aa38.19■■■■□ 3.7
LDB1-204ENST00000490751 FRMD4AQ9P2Q2 1039 aaPredicted RBP38.19■■■■□ 3.7
LDB1-204ENST00000490751 AFG3L2Q9Y4W6 797 aa38.19■■■■□ 3.7
LDB1-204ENST00000490751 PDHXO00330 501 aa38.18■■■■□ 3.7
LDB1-204ENST00000490751 PPIL4Q8WUA2 492 aaKnown RBP eCLIP38.18■■■■□ 3.7
LDB1-204ENST00000490751 PI4KBQ9UBF8 816 aa38.18■■■■□ 3.7
LDB1-204ENST00000490751 HERC5Q9UII4 1024 aaKnown RBP38.18■■■■□ 3.7
LDB1-204ENST00000490751 A0A0G2JLL6 359 aaPredicted RBP38.16■■■■□ 3.7
LDB1-204ENST00000490751 TTF1Q15361 905 aaPredicted RBP38.16■■■■□ 3.7
LDB1-204ENST00000490751 PRRT2Q7Z6L0 340 aaPredicted RBP38.16■■■■□ 3.7
LDB1-204ENST00000490751 CCDC84Q86UT8 332 aaPredicted RBP38.16■■■■□ 3.7
LDB1-204ENST00000490751 TMED8Q6PL24 325 aaPredicted RBP38.15■■■■□ 3.7
LDB1-204ENST00000490751 DNAJC2Q99543 621 aaKnown RBP38.15■■■■□ 3.7
LDB1-204ENST00000490751 MLLT1Q03111 559 aaPredicted RBP38.14■■■■□ 3.7
LDB1-204ENST00000490751 GPAT2Q6NUI2 795 aa38.14■■■■□ 3.7
LDB1-204ENST00000490751 CERS3Q8IU89 383 aa38.14■■■■□ 3.7
LDB1-204ENST00000490751 PTPN22Q9Y2R2 807 aa38.14■■■■□ 3.7
LDB1-204ENST00000490751 ZSWIM8A7E2V4 1837 aa38.14■■■■□ 3.7
LDB1-204ENST00000490751 MYH1P12882 1939 aa38.14■■■■□ 3.7
LDB1-204ENST00000490751 RRP1BQ14684 758 aaKnown RBP38.13■■■■□ 3.69
LDB1-204ENST00000490751 FASTKD5Q7L8L6 764 aaKnown RBP38.13■■■■□ 3.69
LDB1-204ENST00000490751 SAP30BPQ9UHR5 308 aaKnown RBP38.13■■■■□ 3.69
LDB1-204ENST00000490751 PALD1Q9ULE6 856 aa38.13■■■■□ 3.69
LDB1-204ENST00000490751 TRIM75PA6NK02 468 aa38.12■■■■□ 3.69
LDB1-204ENST00000490751 GOLIM4O00461 696 aa38.12■■■■□ 3.69
LDB1-204ENST00000490751 CAP2P40123 477 aa38.12■■■■□ 3.69
LDB1-204ENST00000490751 GADL1Q6ZQY3 521 aa38.12■■■■□ 3.69
LDB1-204ENST00000490751 LRRCC1Q9C099 1032 aa38.12■■■■□ 3.69
LDB1-204ENST00000490751 ARHGEF6Q15052 776 aa38.11■■■■□ 3.69
LDB1-204ENST00000490751 C17orf99Q6UX52 265 aa38.11■■■■□ 3.69
LDB1-204ENST00000490751 CPA4Q9UI42 421 aa38.11■■■■□ 3.69
LDB1-204ENST00000490751 ADGRA2Q96PE1 1338 aa38.11■■■■□ 3.69
LDB1-204ENST00000490751 PARK7Q99497 189 aaKnown RBP38.1■■■■□ 3.69
LDB1-204ENST00000490751 USP5P45974 858 aa38.09■■■■□ 3.69
LDB1-204ENST00000490751 FOXP4Q8IVH2 680 aaPredicted RBP38.09■■■■□ 3.69
LDB1-204ENST00000490751 CRACR2BQ8N4Y2 399 aaPredicted RBP38.09■■■■□ 3.69
LDB1-204ENST00000490751 DNAJC18Q9H819 358 aa38.09■■■■□ 3.69
LDB1-204ENST00000490751 SMARCA5O60264 1052 aaPredicted RBP38.08■■■■□ 3.69
LDB1-204ENST00000490751 HLA-DOAP06340 250 aa38.08■■■■□ 3.69
LDB1-204ENST00000490751 PDE6AP16499 860 aa38.08■■■■□ 3.69
LDB1-204ENST00000490751 LACTBP83111 547 aaPredicted RBP38.08■■■■□ 3.69
LDB1-204ENST00000490751 KIF22Q14807 665 aa38.08■■■■□ 3.69
LDB1-204ENST00000490751 SLC4A8Q2Y0W8 1093 aa38.08■■■■□ 3.69
LDB1-204ENST00000490751 SLC9C2Q5TAH2 1124 aa38.08■■■■□ 3.69
LDB1-204ENST00000490751 METTL16Q86W50 562 aaKnown RBP38.08■■■■□ 3.69
LDB1-204ENST00000490751 EDC3Q96F86 508 aaKnown RBP38.08■■■■□ 3.69
LDB1-204ENST00000490751 YTHDC1Q96MU7 727 aaKnown RBP38.08■■■■□ 3.69
LDB1-204ENST00000490751 TRIM34Q9BYJ4 488 aa38.08■■■■□ 3.69
LDB1-204ENST00000490751 ARHGAP39Q9C0H5 1083 aa38.08■■■■□ 3.69
LDB1-204ENST00000490751 BOLA2Q9H3K6 86 aa38.08■■■■□ 3.69
LDB1-204ENST00000490751 ATP5JP18859 108 aa38.07■■■■□ 3.68
LDB1-204ENST00000490751 RIOK1Q9BRS2 568 aaKnown RBP38.07■■■■□ 3.68
LDB1-204ENST00000490751 HTTP42858 3142 aa38.07■■■■□ 3.68
LDB1-204ENST00000490751 CYP2C8P10632 490 aa38.06■■■■□ 3.68
LDB1-204ENST00000490751 RRP1P56182 461 aaKnown RBP38.06■■■■□ 3.68
LDB1-204ENST00000490751 TBC1D2Q9BYX2 928 aa38.05■■■■□ 3.68
LDB1-204ENST00000490751 PAG1Q9NWQ8 432 aa38.05■■■■□ 3.68
LDB1-204ENST00000490751 LOC285556D6RIA3 1793 aa38.04■■■■□ 3.68
LDB1-204ENST00000490751 MAGEB6P1A0A0J9YX57 407 aa38.04■■■■□ 3.68
LDB1-204ENST00000490751 USP17L5A8MUK1 530 aa38.04■■■■□ 3.68
LDB1-204ENST00000490751 SPP2Q13103 211 aa38.04■■■■□ 3.68
LDB1-204ENST00000490751 ZNF280CQ8ND82 737 aa38.04■■■■□ 3.68
LDB1-204ENST00000490751 DCTPP1Q9H773 170 aa38.04■■■■□ 3.68
LDB1-204ENST00000490751 SLC45A1Q9Y2W3 748 aa38.04■■■■□ 3.68
LDB1-204ENST00000490751 ZNF532Q9HCE3 1301 aa38.04■■■■□ 3.68
LDB1-204ENST00000490751 NAV1Q8NEY1 1877 aa38.03■■■■□ 3.68
LDB1-204ENST00000490751 DDX60LQ5H9U9 1706 aaKnown RBP38.03■■■■□ 3.68
LDB1-204ENST00000490751 ECM2O94769 699 aaPredicted RBP38.02■■■■□ 3.68
LDB1-204ENST00000490751 HAUS7Q99871 368 aa38.02■■■■□ 3.68
LDB1-204ENST00000490751 AGTPBP1Q9UPW5 1226 aa38.02■■■■□ 3.68
LDB1-204ENST00000490751 TCRBV5S4A2TA0A5A2 114 aa38.01■■■■□ 3.68
LDB1-204ENST00000490751 ASNSP08243 561 aa38.01■■■■□ 3.68
LDB1-204ENST00000490751 AS3MTQ9HBK9 375 aa38.01■■■■□ 3.68
LDB1-204ENST00000490751 PTCH2Q9Y6C5 1203 aa38.01■■■■□ 3.68
LDB1-204ENST00000490751 GDF11O95390 407 aa38■■■■□ 3.67
LDB1-204ENST00000490751 JAG1P78504 1218 aa38■■■■□ 3.67
LDB1-204ENST00000490751 MYH7P12883 1935 aa38■■■■□ 3.67
LDB1-204ENST00000490751 BCRP11274 1271 aa37.99■■■■□ 3.67
LDB1-204ENST00000490751 TREML2Q5T2D2 321 aa37.99■■■■□ 3.67
LDB1-204ENST00000490751 PROCA1Q8NCQ7 364 aaPredicted RBP37.99■■■■□ 3.67
LDB1-204ENST00000490751 CTGFP29279 349 aa37.98■■■■□ 3.67
LDB1-204ENST00000490751 HMGCS2P54868 508 aa37.98■■■■□ 3.67
LDB1-204ENST00000490751 SHROOM1Q2M3G4 852 aaPredicted RBP37.98■■■■□ 3.67
LDB1-204ENST00000490751 ARMC5Q96C12 935 aa37.98■■■■□ 3.67
LDB1-204ENST00000490751 CRNKL1Q9BZJ0 848 aaKnown RBP37.98■■■■□ 3.67
LDB1-204ENST00000490751 PCDHB15Q9Y5E8 787 aa37.98■■■■□ 3.67
LDB1-204ENST00000490751 GNRH1P01148 92 aa37.97■■■■□ 3.67
LDB1-204ENST00000490751 PSMC4P43686 418 aa37.97■■■■□ 3.67
LDB1-204ENST00000490751 TTC6Q86TZ1 520 aa37.97■■■■□ 3.67
LDB1-204ENST00000490751 GINM1Q9NU53 330 aa37.97■■■■□ 3.67
LDB1-204ENST00000490751 SERPINB13Q9UIV8 391 aa37.97■■■■□ 3.67
LDB1-204ENST00000490751 ZBTB21Q9ULJ3 1066 aa37.97■■■■□ 3.67
LDB1-204ENST00000490751 ADD2P35612 726 aa37.96■■■■□ 3.67
LDB1-204ENST00000490751 SMCR8Q8TEV9 937 aaPredicted RBP37.96■■■■□ 3.67
LDB1-204ENST00000490751 TRIM47Q96LD4 638 aa37.96■■■■□ 3.67
LDB1-204ENST00000490751 WDR18Q9BV38 432 aa37.96■■■■□ 3.67
LDB1-204ENST00000490751 EHD4Q9H223 541 aa37.96■■■■□ 3.67
LDB1-204ENST00000490751 MGAMO43451 1857 aa37.96■■■■□ 3.67
LDB1-204ENST00000490751 LCORLQ8N3X6 602 aa37.95■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms