RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 FBXO27Q8NI29 283 aa7.9□□□□□ -1.14
HMGB1P38-201ENST00000490557 NKD1Q969G9 470 aa7.9□□□□□ -1.14
HMGB1P38-201ENST00000490557 FAM83CQ9BQN1 747 aa7.9□□□□□ -1.14
HMGB1P38-201ENST00000490557 SEMA6CQ9H3T2 930 aa7.9□□□□□ -1.14
HMGB1P38-201ENST00000490557 ACSS3Q9H6R3 686 aa7.9□□□□□ -1.14
HMGB1P38-201ENST00000490557 KCNQ5Q9NR82 932 aa7.9□□□□□ -1.14
HMGB1P38-201ENST00000490557 UBP1Q9NZI7 540 aa7.9□□□□□ -1.14
HMGB1P38-201ENST00000490557 PCOLCE2Q9UKZ9 415 aa7.9□□□□□ -1.14
HMGB1P38-201ENST00000490557 INPP5FQ9Y2H2 1132 aa7.9□□□□□ -1.14
HMGB1P38-201ENST00000490557 TACC3Q9Y6A5 838 aa7.9□□□□□ -1.14
HMGB1P38-201ENST00000490557 GFRA2O00451 464 aa7.89□□□□□ -1.15
HMGB1P38-201ENST00000490557 GREM1O60565 184 aa7.89□□□□□ -1.15
HMGB1P38-201ENST00000490557 H2AFB1P0C5Y9 115 aa7.89□□□□□ -1.15
HMGB1P38-201ENST00000490557 H2AFB2P0C5Z0 115 aa7.89□□□□□ -1.15
HMGB1P38-201ENST00000490557 GRK4P32298 578 aa7.89□□□□□ -1.15
HMGB1P38-201ENST00000490557 MLECQ14165 292 aa7.89□□□□□ -1.15
HMGB1P38-201ENST00000490557 SEZ6Q53EL9 994 aa7.89□□□□□ -1.15
HMGB1P38-201ENST00000490557 REC114Q7Z4M0 266 aa7.89□□□□□ -1.15
HMGB1P38-201ENST00000490557 ISL2Q96A47 359 aa7.89□□□□□ -1.15
HMGB1P38-201ENST00000490557 NT5C1AQ9BXI3 368 aa7.89□□□□□ -1.15
HMGB1P38-201ENST00000490557 WNT10AQ9GZT5 417 aa7.89□□□□□ -1.15
HMGB1P38-201ENST00000490557 HMX2A2RU54 273 aa7.88□□□□□ -1.15
HMGB1P38-201ENST00000490557 PGRP06401 933 aa7.88□□□□□ -1.15
HMGB1P38-201ENST00000490557 NEFMP07197 916 aa7.88□□□□□ -1.15
HMGB1P38-201ENST00000490557 PAK2Q13177 524 aa7.88□□□□□ -1.15
HMGB1P38-201ENST00000490557 GIMAP7Q8NHV1 300 aa7.88□□□□□ -1.15
HMGB1P38-201ENST00000490557 EZH1Q92800 747 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P38-201ENST00000490557 ACBD3Q9H3P7 528 aa7.88□□□□□ -1.15
HMGB1P38-201ENST00000490557 C7orf69Q9H7B7 122 aa7.88□□□□□ -1.15
HMGB1P38-201ENST00000490557 GSC2O15499 205 aa7.87□□□□□ -1.15
HMGB1P38-201ENST00000490557 GRIN3BO60391 1043 aa7.87□□□□□ -1.15
HMGB1P38-201ENST00000490557 FURINP09958 794 aa7.87□□□□□ -1.15
HMGB1P38-201ENST00000490557 RING1Q06587 406 aa7.87□□□□□ -1.15
HMGB1P38-201ENST00000490557 RAD51AP2Q09MP3 1159 aa7.87□□□□□ -1.15
HMGB1P38-201ENST00000490557 HID1Q8IV36 788 aa7.87□□□□□ -1.15
HMGB1P38-201ENST00000490557 GPRASP2Q96D09 838 aa7.87□□□□□ -1.15
HMGB1P38-201ENST00000490557 EAF1Q96JC9 268 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P38-201ENST00000490557 SPATA32Q96LK8 384 aa7.87□□□□□ -1.15
HMGB1P38-201ENST00000490557 LRRC3Q9BY71 257 aa7.87□□□□□ -1.15
HMGB1P38-201ENST00000490557 CAPN10Q9HC96 672 aa7.87□□□□□ -1.15
HMGB1P38-201ENST00000490557 PLCG1P19174 1290 aa7.86□□□□□ -1.15
HMGB1P38-201ENST00000490557 CRKP46108 304 aa7.86□□□□□ -1.15
HMGB1P38-201ENST00000490557 ZNF165P49910 485 aa7.86□□□□□ -1.15
HMGB1P38-201ENST00000490557 RSPO4Q2I0M5 234 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P38-201ENST00000490557 TBC1D32Q96NH3 1257 aa7.86□□□□□ -1.15
HMGB1P38-201ENST00000490557 BRMS1Q9HCU9 246 aa7.86□□□□□ -1.15
HMGB1P38-201ENST00000490557 FSTP19883 344 aa7.85□□□□□ -1.15
HMGB1P38-201ENST00000490557 NKAPLQ5M9Q1 402 aa7.85□□□□□ -1.15
HMGB1P38-201ENST00000490557 RNF43Q68DV7 783 aa7.85□□□□□ -1.15
HMGB1P38-201ENST00000490557 GK5Q6ZS86 529 aa7.85□□□□□ -1.15
HMGB1P38-201ENST00000490557 VPS37DQ86XT2 251 aa7.85□□□□□ -1.15
HMGB1P38-201ENST00000490557 FBXL6Q8N531 539 aa7.85□□□□□ -1.15
HMGB1P38-201ENST00000490557 SEMA6BQ9H3T3 888 aa7.85□□□□□ -1.15
HMGB1P38-201ENST00000490557 IGSF5Q9NSI5 407 aa7.85□□□□□ -1.15
HMGB1P38-201ENST00000490557 PCDHB14Q9Y5E9 798 aa7.85□□□□□ -1.15
HMGB1P38-201ENST00000490557 DYRK3O43781 588 aa7.84□□□□□ -1.15
HMGB1P38-201ENST00000490557 NFIAQ12857 509 aa7.84□□□□□ -1.15
HMGB1P38-201ENST00000490557 FBXW10Q5XX13 1052 aa7.84□□□□□ -1.15
HMGB1P38-201ENST00000490557 MFSD14AQ96MC6 490 aa7.84□□□□□ -1.15
HMGB1P38-201ENST00000490557 FERD3LQ96RJ6 166 aa7.84□□□□□ -1.15
HMGB1P38-201ENST00000490557 DBNDD2Q9BQY9 259 aa7.84□□□□□ -1.15
HMGB1P38-201ENST00000490557 PRKAG2Q9UGJ0 569 aa7.84□□□□□ -1.15
HMGB1P38-201ENST00000490557 ADAM30Q9UKF2 790 aa7.84□□□□□ -1.15
HMGB1P38-201ENST00000490557 CORINQ9Y5Q5 1042 aa7.84□□□□□ -1.15
HMGB1P38-201ENST00000490557 DYNC1LI2O43237 492 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P38-201ENST00000490557 HTR3BO95264 441 aa7.83□□□□□ -1.16
HMGB1P38-201ENST00000490557 IGLV1-40P01703 118 aa7.83□□□□□ -1.16
HMGB1P38-201ENST00000490557 NTF4P34130 210 aa7.83□□□□□ -1.16
HMGB1P38-201ENST00000490557 TNNI2P48788 182 aa7.83□□□□□ -1.16
HMGB1P38-201ENST00000490557 YARSP54577 528 aaKnown RBP7.83□□□□□ -1.16
HMGB1P38-201ENST00000490557 CDK5R2Q13319 367 aa7.83□□□□□ -1.16
HMGB1P38-201ENST00000490557 SLITRK4Q8IW52 837 aa7.83□□□□□ -1.16
HMGB1P38-201ENST00000490557 FOXQ1Q9C009 403 aa7.83□□□□□ -1.16
HMGB1P38-201ENST00000490557 ATG3Q9NT62 314 aa7.83□□□□□ -1.16
HMGB1P38-201ENST00000490557 KLHL3Q9UH77 587 aa7.83□□□□□ -1.16
HMGB1P38-201ENST00000490557 POLR3KQ9Y2Y1 108 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P38-201ENST00000490557 LRIG2O94898 1065 aa7.82□□□□□ -1.16
HMGB1P38-201ENST00000490557 ZC3H6P61129 1189 aaKnown RBP7.82□□□□□ -1.16
HMGB1P38-201ENST00000490557 CYP27A1Q02318 531 aa7.82□□□□□ -1.16
HMGB1P38-201ENST00000490557 COL9A2Q14055 689 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P38-201ENST00000490557 SLC6A19Q695T7 634 aa7.82□□□□□ -1.16
HMGB1P38-201ENST00000490557 ARMCX6Q7L4S7 300 aa7.82□□□□□ -1.16
HMGB1P38-201ENST00000490557 REXO1Q8N1G1 1221 aaKnown RBP7.82□□□□□ -1.16
HMGB1P38-201ENST00000490557 FAM13CQ8NE31 585 aa7.82□□□□□ -1.16
HMGB1P38-201ENST00000490557 FBRSQ9HAH7 460 aa7.82□□□□□ -1.16
HMGB1P38-201ENST00000490557 REV1Q9UBZ9 1251 aa7.82□□□□□ -1.16
HMGB1P38-201ENST00000490557 EFR3BQ9Y2G0 817 aa7.82□□□□□ -1.16
HMGB1P38-201ENST00000490557 RANGAP1P46060 587 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P38-201ENST00000490557 GJA8P48165 433 aa7.81□□□□□ -1.16
HMGB1P38-201ENST00000490557 DUSP27Q5VZP5 1158 aa7.81□□□□□ -1.16
HMGB1P38-201ENST00000490557 UBE3DQ7Z6J8 389 aa7.81□□□□□ -1.16
HMGB1P38-201ENST00000490557 ZAR1Q86SH2 424 aa7.81□□□□□ -1.16
HMGB1P38-201ENST00000490557 SLC51AQ86UW1 340 aa7.81□□□□□ -1.16
HMGB1P38-201ENST00000490557 CPLX3Q8WVH0 158 aa7.81□□□□□ -1.16
HMGB1P38-201ENST00000490557 TMEM87BQ96K49 555 aa7.81□□□□□ -1.16
HMGB1P38-201ENST00000490557 OSBPL1AQ9BXW6 950 aa7.81□□□□□ -1.16
HMGB1P38-201ENST00000490557 C1GALT1Q9NS00 363 aa7.81□□□□□ -1.16
HMGB1P38-201ENST00000490557 PRR36Q9H6K5 1346 aa7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 WDR64B1ANS9 1081 aa7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 K7ELQ4 463 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms