RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 PI4KBQ9UBF8 816 aa24■■□□□ 1.43
SMC4-222ENST00000490207 HERC5Q9UII4 1024 aaKnown RBP24■■□□□ 1.43
SMC4-222ENST00000490207 ZHX2Q9Y6X8 837 aa24■■□□□ 1.43
SMC4-222ENST00000490207 CXCL11O14625 94 aa23.99■■□□□ 1.43
SMC4-222ENST00000490207 SMARCA5O60264 1052 aaPredicted RBP23.99■■□□□ 1.43
SMC4-222ENST00000490207 SP3Q02447 781 aa23.99■■□□□ 1.43
SMC4-222ENST00000490207 ANKRD23Q86SG2 305 aa23.99■■□□□ 1.43
SMC4-222ENST00000490207 CD99L2Q8TCZ2 262 aa23.99■■□□□ 1.43
SMC4-222ENST00000490207 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.99■■□□□ 1.43
SMC4-222ENST00000490207 PDE6AP16499 860 aa23.98■■□□□ 1.43
SMC4-222ENST00000490207 ATP5JP18859 108 aa23.98■■□□□ 1.43
SMC4-222ENST00000490207 FBXO46Q6PJ61 603 aaPredicted RBP23.98■■□□□ 1.43
SMC4-222ENST00000490207 BOLA2Q9H3K6 86 aa23.98■■□□□ 1.43
SMC4-222ENST00000490207 DCTPP1Q9H773 170 aa23.98■■□□□ 1.43
SMC4-222ENST00000490207 PAG1Q9NWQ8 432 aa23.98■■□□□ 1.43
SMC4-222ENST00000490207 HPS5Q9UPZ3 1129 aa23.98■■□□□ 1.43
SMC4-222ENST00000490207 TRIM17Q9Y577 477 aa23.98■■□□□ 1.43
SMC4-222ENST00000490207 LOC285556D6RIA3 1793 aa23.98■■□□□ 1.43
SMC4-222ENST00000490207 ZSWIM8A7E2V4 1837 aa23.97■■□□□ 1.43
SMC4-222ENST00000490207 USP5P45974 858 aa23.97■■□□□ 1.43
SMC4-222ENST00000490207 MOGSQ13724 837 aa23.97■■□□□ 1.43
SMC4-222ENST00000490207 EDC3Q96F86 508 aaKnown RBP23.97■■□□□ 1.43
SMC4-222ENST00000490207 SAP30BPQ9UHR5 308 aaKnown RBP23.97■■□□□ 1.43
SMC4-222ENST00000490207 PALD1Q9ULE6 856 aa23.97■■□□□ 1.43
SMC4-222ENST00000490207 AFG3L2Q9Y4W6 797 aa23.97■■□□□ 1.43
SMC4-222ENST00000490207 A0A0G2JLL6 359 aaPredicted RBP23.96■■□□□ 1.43
SMC4-222ENST00000490207 PDHXO00330 501 aa23.96■■□□□ 1.43
SMC4-222ENST00000490207 HLA-DOAP06340 250 aa23.96■■□□□ 1.43
SMC4-222ENST00000490207 SLC9C2Q5TAH2 1124 aa23.96■■□□□ 1.43
SMC4-222ENST00000490207 OTOP1Q7RTM1 612 aa23.96■■□□□ 1.43
SMC4-222ENST00000490207 PRRT2Q7Z6L0 340 aaPredicted RBP23.96■■□□□ 1.43
SMC4-222ENST00000490207 CCDC84Q86UT8 332 aaPredicted RBP23.96■■□□□ 1.43
SMC4-222ENST00000490207 CRACR2BQ8N4Y2 399 aaPredicted RBP23.96■■□□□ 1.43
SMC4-222ENST00000490207 RIOK1Q9BRS2 568 aaKnown RBP23.96■■□□□ 1.43
SMC4-222ENST00000490207 TRIM34Q9BYJ4 488 aa23.96■■□□□ 1.43
SMC4-222ENST00000490207 ZNF532Q9HCE3 1301 aa23.95■■□□□ 1.42
SMC4-222ENST00000490207 MAGEB6P1A0A0J9YX57 407 aa23.95■■□□□ 1.42
SMC4-222ENST00000490207 TLR2O60603 784 aa23.95■■□□□ 1.42
SMC4-222ENST00000490207 CAP2P40123 477 aa23.95■■□□□ 1.42
SMC4-222ENST00000490207 SLC4A8Q2Y0W8 1093 aa23.95■■□□□ 1.42
SMC4-222ENST00000490207 CRBNQ96SW2 442 aa23.95■■□□□ 1.42
SMC4-222ENST00000490207 HAUS7Q99871 368 aa23.95■■□□□ 1.42
SMC4-222ENST00000490207 PCDHB15Q9Y5E8 787 aa23.95■■□□□ 1.42
SMC4-222ENST00000490207 TRIM75PA6NK02 468 aa23.94■■□□□ 1.42
SMC4-222ENST00000490207 RRP1BQ14684 758 aaKnown RBP23.94■■□□□ 1.42
SMC4-222ENST00000490207 GADL1Q6ZQY3 521 aa23.94■■□□□ 1.42
SMC4-222ENST00000490207 FASTKD5Q7L8L6 764 aaKnown RBP23.94■■□□□ 1.42
SMC4-222ENST00000490207 DNAJC18Q9H819 358 aa23.94■■□□□ 1.42
SMC4-222ENST00000490207 TCRBV5S4A2TA0A5A2 114 aa23.93■■□□□ 1.42
SMC4-222ENST00000490207 GPAT2Q6NUI2 795 aa23.93■■□□□ 1.42
SMC4-222ENST00000490207 METTL16Q86W50 562 aaKnown RBP23.93■■□□□ 1.42
SMC4-222ENST00000490207 FOXP4Q8IVH2 680 aaPredicted RBP23.93■■□□□ 1.42
SMC4-222ENST00000490207 PARK7Q99497 189 aaKnown RBP23.93■■□□□ 1.42
SMC4-222ENST00000490207 TBC1D2Q9BYX2 928 aa23.93■■□□□ 1.42
SMC4-222ENST00000490207 EFCC1Q9HA90 598 aa23.93■■□□□ 1.42
SMC4-222ENST00000490207 ADGRA2Q96PE1 1338 aa23.92■■□□□ 1.42
SMC4-222ENST00000490207 CAP1Q01518 475 aa23.92■■□□□ 1.42
SMC4-222ENST00000490207 GPATCH3Q96I76 525 aa23.92■■□□□ 1.42
SMC4-222ENST00000490207 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.92■■□□□ 1.42
SMC4-222ENST00000490207 ECHDC1Q9NTX5 307 aa23.92■■□□□ 1.42
SMC4-222ENST00000490207 CRNKL1Q9BZJ0 848 aaKnown RBP23.91■■□□□ 1.42
SMC4-222ENST00000490207 USP17L5A8MUK1 530 aa23.9■■□□□ 1.42
SMC4-222ENST00000490207 ADD2P35612 726 aa23.9■■□□□ 1.42
SMC4-222ENST00000490207 ARHGEF6Q15052 776 aa23.9■■□□□ 1.42
SMC4-222ENST00000490207 ZNF280CQ8ND82 737 aa23.9■■□□□ 1.42
SMC4-222ENST00000490207 AS3MTQ9HBK9 375 aa23.9■■□□□ 1.42
SMC4-222ENST00000490207 CPA4Q9UI42 421 aa23.9■■□□□ 1.42
SMC4-222ENST00000490207 ASNSP08243 561 aa23.89■■□□□ 1.41
SMC4-222ENST00000490207 KIF22Q14807 665 aa23.89■■□□□ 1.41
SMC4-222ENST00000490207 C17orf99Q6UX52 265 aa23.89■■□□□ 1.41
SMC4-222ENST00000490207 LCORLQ8N3X6 602 aa23.89■■□□□ 1.41
SMC4-222ENST00000490207 EHD4Q9H223 541 aa23.89■■□□□ 1.41
SMC4-222ENST00000490207 PTPN22Q9Y2R2 807 aa23.89■■□□□ 1.41
SMC4-222ENST00000490207 SLC45A1Q9Y2W3 748 aa23.89■■□□□ 1.41
SMC4-222ENST00000490207 MYH8P13535 1937 aa23.88■■□□□ 1.41
SMC4-222ENST00000490207 MGAMO43451 1857 aa23.88■■□□□ 1.41
SMC4-222ENST00000490207 GDF11O95390 407 aa23.88■■□□□ 1.41
SMC4-222ENST00000490207 CYP2C8P10632 490 aa23.88■■□□□ 1.41
SMC4-222ENST00000490207 SOX10P56693 466 aa23.88■■□□□ 1.41
SMC4-222ENST00000490207 LACTBP83111 547 aaPredicted RBP23.88■■□□□ 1.41
SMC4-222ENST00000490207 SPP2Q13103 211 aa23.88■■□□□ 1.41
SMC4-222ENST00000490207 TTC6Q86TZ1 520 aa23.88■■□□□ 1.41
SMC4-222ENST00000490207 AGTPBP1Q9UPW5 1226 aa23.88■■□□□ 1.41
SMC4-222ENST00000490207 BAZ2AQ9UIF9 1905 aaKnown RBP23.88■■□□□ 1.41
SMC4-222ENST00000490207 HTTP42858 3142 aa23.88■■□□□ 1.41
SMC4-222ENST00000490207 SLFNL1Q499Z3 407 aa23.87■■□□□ 1.41
SMC4-222ENST00000490207 PROCA1Q8NCQ7 364 aaPredicted RBP23.87■■□□□ 1.41
SMC4-222ENST00000490207 ARMT1Q9H993 441 aa23.87■■□□□ 1.41
SMC4-222ENST00000490207 GINM1Q9NU53 330 aa23.87■■□□□ 1.41
SMC4-222ENST00000490207 SERPINB13Q9UIV8 391 aa23.87■■□□□ 1.41
SMC4-222ENST00000490207 ZBTB21Q9ULJ3 1066 aa23.87■■□□□ 1.41
SMC4-222ENST00000490207 MBD4O95243 580 aa23.86■■□□□ 1.41
SMC4-222ENST00000490207 SHROOM1Q2M3G4 852 aaPredicted RBP23.86■■□□□ 1.41
SMC4-222ENST00000490207 TSHZ3Q63HK5 1081 aa23.86■■□□□ 1.41
SMC4-222ENST00000490207 ZSCAN25Q6NSZ9 544 aa23.86■■□□□ 1.41
SMC4-222ENST00000490207 SDR42E1Q8WUS8 393 aa23.86■■□□□ 1.41
SMC4-222ENST00000490207 ARHGAP39Q9C0H5 1083 aa23.86■■□□□ 1.41
SMC4-222ENST00000490207 POLR3DP05423 398 aaPredicted RBP23.85■■□□□ 1.41
SMC4-222ENST00000490207 RGS19P49795 217 aa23.85■■□□□ 1.41
SMC4-222ENST00000490207 HMGCS2P54868 508 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms