RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 EFCAB3Q8N7B9 438 aa13.22□□□□□ -0.29
UBP1-211ENST00000490112 SH3TC2Q8TF17 1288 aa13.22□□□□□ -0.29
UBP1-211ENST00000490112 TRIM47Q96LD4 638 aa13.22□□□□□ -0.29
UBP1-211ENST00000490112 ZSWIM6Q9HCJ5 1215 aa13.22□□□□□ -0.29
UBP1-211ENST00000490112 ABCF2Q9UG63 623 aa13.22□□□□□ -0.29
UBP1-211ENST00000490112 SLC45A1Q9Y2W3 748 aa13.22□□□□□ -0.29
UBP1-211ENST00000490112 ADGRA2Q96PE1 1338 aa13.21□□□□□ -0.29
UBP1-211ENST00000490112 A0A0G2JLL6 359 aaPredicted RBP13.21□□□□□ -0.29
UBP1-211ENST00000490112 PHF20L1A8MW92 1017 aa13.21□□□□□ -0.29
UBP1-211ENST00000490112 IPO8O15397 1037 aaKnown RBP13.21□□□□□ -0.29
UBP1-211ENST00000490112 SRGAP3O43295 1099 aa13.21□□□□□ -0.29
UBP1-211ENST00000490112 CAPN2P17655 700 aa13.21□□□□□ -0.29
UBP1-211ENST00000490112 OSBPP22059 807 aa13.21□□□□□ -0.29
UBP1-211ENST00000490112 GRK4P32298 578 aa13.21□□□□□ -0.29
UBP1-211ENST00000490112 FCGRTP55899 365 aa13.21□□□□□ -0.29
UBP1-211ENST00000490112 TIMM10P62072 90 aa13.21□□□□□ -0.29
UBP1-211ENST00000490112 GSTO1P78417 241 aa13.21□□□□□ -0.29
UBP1-211ENST00000490112 MTX1Q13505 466 aa13.21□□□□□ -0.29
UBP1-211ENST00000490112 MOGSQ13724 837 aa13.21□□□□□ -0.29
UBP1-211ENST00000490112 ERICH6Q7L0X2 663 aa13.21□□□□□ -0.29
UBP1-211ENST00000490112 PRRT2Q7Z6L0 340 aaPredicted RBP13.21□□□□□ -0.29
UBP1-211ENST00000490112 RNF166Q96A37 237 aaPredicted RBP13.21□□□□□ -0.29
UBP1-211ENST00000490112 PA2G4Q9UQ80 394 aaKnown RBP13.21□□□□□ -0.29
UBP1-211ENST00000490112 ZHX2Q9Y6X8 837 aa13.21□□□□□ -0.29
UBP1-211ENST00000490112 DOCK2Q92608 1830 aa13.2□□□□□ -0.3
UBP1-211ENST00000490112 MYPNQ86TC9 1320 aa13.2□□□□□ -0.3
UBP1-211ENST00000490112 A0A1B0GUL7 405 aa13.2□□□□□ -0.3
UBP1-211ENST00000490112 LDHCP07864 332 aa13.2□□□□□ -0.3
UBP1-211ENST00000490112 PTPRAP18433 802 aa13.2□□□□□ -0.3
UBP1-211ENST00000490112 ADORA1P30542 326 aa13.2□□□□□ -0.3
UBP1-211ENST00000490112 RARSP54136 660 aaKnown RBP13.2□□□□□ -0.3
UBP1-211ENST00000490112 UBXN2AP68543 259 aa13.2□□□□□ -0.3
UBP1-211ENST00000490112 RASGRF1Q13972 1273 aa13.2□□□□□ -0.3
UBP1-211ENST00000490112 VARS2Q5ST30 1063 aaKnown RBP13.2□□□□□ -0.3
UBP1-211ENST00000490112 GPAT2Q6NUI2 795 aa13.2□□□□□ -0.3
UBP1-211ENST00000490112 ZFPM1Q8IX07 1006 aa13.2□□□□□ -0.3
UBP1-211ENST00000490112 XAGE2Q96GT9 111 aa13.2□□□□□ -0.3
UBP1-211ENST00000490112 MEIS3Q99687 375 aa13.2□□□□□ -0.3
UBP1-211ENST00000490112 AFG3L2Q9Y4W6 797 aa13.2□□□□□ -0.3
UBP1-211ENST00000490112 ATRNL1Q5VV63 1379 aa13.2□□□□□ -0.3
UBP1-211ENST00000490112 MROH7-TTC4A0A0A0MT08 1334 aa13.19□□□□□ -0.3
UBP1-211ENST00000490112 TBC1D12O60347 775 aa13.19□□□□□ -0.3
UBP1-211ENST00000490112 MYCP01106 439 aaPredicted RBP13.19□□□□□ -0.3
UBP1-211ENST00000490112 BCRP11274 1271 aa13.19□□□□□ -0.3
UBP1-211ENST00000490112 BTDP43251 543 aa13.19□□□□□ -0.3
UBP1-211ENST00000490112 GORABQ5T7V8 394 aa13.19□□□□□ -0.3
UBP1-211ENST00000490112 TBC1D2Q9BYX2 928 aa13.19□□□□□ -0.3
UBP1-211ENST00000490112 BIN2Q9UBW5 565 aaPredicted RBP13.19□□□□□ -0.3
UBP1-211ENST00000490112 RFX7Q2KHR2 1363 aa13.19□□□□□ -0.3
UBP1-211ENST00000490112 GPR75-ASB3A0A0A6YYF3 556 aa13.18□□□□□ -0.3
UBP1-211ENST00000490112 GJB1P08034 283 aa13.18□□□□□ -0.3
UBP1-211ENST00000490112 CTGFP29279 349 aa13.18□□□□□ -0.3
UBP1-211ENST00000490112 TFCP2Q12800 502 aa13.18□□□□□ -0.3
UBP1-211ENST00000490112 GADL1Q6ZQY3 521 aa13.18□□□□□ -0.3
UBP1-211ENST00000490112 SMCR8Q8TEV9 937 aaPredicted RBP13.18□□□□□ -0.3
UBP1-211ENST00000490112 NEUROD6Q96NK8 337 aa13.18□□□□□ -0.3
UBP1-211ENST00000490112 PNMA3Q9UL41 463 aa13.18□□□□□ -0.3
UBP1-211ENST00000490112 ZSWIM8A7E2V4 1837 aa13.18□□□□□ -0.3
UBP1-211ENST00000490112 DDTLA6NHG4 134 aaPredicted RBP13.17□□□□□ -0.3
UBP1-211ENST00000490112 CCER2I3L3R5 266 aa13.17□□□□□ -0.3
UBP1-211ENST00000490112 GNAI2P04899 355 aa13.17□□□□□ -0.3
UBP1-211ENST00000490112 CYP2C8P10632 490 aa13.17□□□□□ -0.3
UBP1-211ENST00000490112 CCL5P13501 91 aa13.17□□□□□ -0.3
UBP1-211ENST00000490112 GJA8P48165 433 aa13.17□□□□□ -0.3
UBP1-211ENST00000490112 MECOMQ03112 1051 aa13.17□□□□□ -0.3
UBP1-211ENST00000490112 PICALMQ13492 652 aa13.17□□□□□ -0.3
UBP1-211ENST00000490112 MTFR1Q15390 333 aa13.17□□□□□ -0.3
UBP1-211ENST00000490112 SH3BP5LQ7L8J4 393 aa13.17□□□□□ -0.3
UBP1-211ENST00000490112 HTATIP2Q9BUP3 242 aa13.17□□□□□ -0.3
UBP1-211ENST00000490112 RNF208Q9H0X6 261 aa13.17□□□□□ -0.3
UBP1-211ENST00000490112 CEP290O15078 2479 aa13.17□□□□□ -0.3
UBP1-211ENST00000490112 ECM2O94769 699 aaPredicted RBP13.16□□□□□ -0.3
UBP1-211ENST00000490112 UQCRFS1P1P0C7P4 283 aa13.16□□□□□ -0.3
UBP1-211ENST00000490112 PRKCZQ05513 592 aa13.16□□□□□ -0.3
UBP1-211ENST00000490112 G3BP1Q13283 466 aaKnown RBP eCLIP13.16□□□□□ -0.3
UBP1-211ENST00000490112 PABPC4Q13310 644 aaKnown RBP eCLIP13.16□□□□□ -0.3
UBP1-211ENST00000490112 SPATA5Q8NB90 893 aa13.16□□□□□ -0.3
UBP1-211ENST00000490112 PROCA1Q8NCQ7 364 aaPredicted RBP13.16□□□□□ -0.3
UBP1-211ENST00000490112 PXYLP1Q8TE99 480 aa13.16□□□□□ -0.3
UBP1-211ENST00000490112 DPF3Q92784 378 aa13.16□□□□□ -0.3
UBP1-211ENST00000490112 NOL10Q9BSC4 688 aaKnown RBP13.16□□□□□ -0.3
UBP1-211ENST00000490112 OSBPL5Q9H0X9 879 aaPredicted RBP13.16□□□□□ -0.3
UBP1-211ENST00000490112 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.16□□□□□ -0.3
UBP1-211ENST00000490112 AGTPBP1Q9UPW5 1226 aa13.16□□□□□ -0.3
UBP1-211ENST00000490112 MGAMO43451 1857 aa13.16□□□□□ -0.3
UBP1-211ENST00000490112 DOCK1Q14185 1865 aa13.16□□□□□ -0.3
UBP1-211ENST00000490112 COL2A1P02458 1487 aaPredicted RBP13.16□□□□□ -0.3
UBP1-211ENST00000490112 TRIM75PA6NK02 468 aa13.15□□□□□ -0.3
UBP1-211ENST00000490112 H0YGN5 161 aa13.15□□□□□ -0.3
UBP1-211ENST00000490112 TNPO2O14787 897 aaKnown RBP13.15□□□□□ -0.3
UBP1-211ENST00000490112 IGSF3O75054 1194 aa13.15□□□□□ -0.3
UBP1-211ENST00000490112 ARID4AP29374 1257 aaPredicted RBP13.15□□□□□ -0.3
UBP1-211ENST00000490112 RHBDL3P58872 404 aa13.15□□□□□ -0.3
UBP1-211ENST00000490112 IRF5Q13568 498 aa13.15□□□□□ -0.3
UBP1-211ENST00000490112 ZNF687Q8N1G0 1237 aa13.15□□□□□ -0.3
UBP1-211ENST00000490112 COA7Q96BR5 231 aa13.15□□□□□ -0.3
UBP1-211ENST00000490112 NSUN4Q96CB9 384 aaKnown RBP13.15□□□□□ -0.3
UBP1-211ENST00000490112 DDX4Q9NQI0 724 aaKnown RBP13.15□□□□□ -0.3
UBP1-211ENST00000490112 RAI14Q9P0K7 980 aa13.15□□□□□ -0.3
UBP1-211ENST00000490112 HMG20BQ9P0W2 317 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms