RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 SEC62Q99442 399 aaKnown RBP9.86□□□□□ -0.83
LSAMP-205ENST00000490035 POLKQ9UBT6 870 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 TPCN1Q9ULQ1 816 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 TNFAIP3P21580 790 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 ITIH3Q06033 890 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 CCDC62Q6P9F0 684 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 ZNF354CQ86Y25 554 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 FAM204AQ9H8W3 233 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 KCNH3Q9ULD8 1083 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 A0A1B0GUL7 405 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 PDE8AO60658 829 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 ADAMTS2O95450 1211 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 TSNAXIP1Q2TAA8 658 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 IGSF22Q8N9C0 903 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 PARP3Q9Y6F1 533 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 CHMP4BP1P59074 171 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 KDM2BQ8NHM5 1336 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 E7EVH7 732 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 MICALL1Q8N3F8 863 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 HAUS1Q96CS2 278 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 DSCC1Q9BVC3 393 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 RASSF4Q9H2L5 321 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 TRAF5O00463 557 aa9.85□□□□□ -0.83
LSAMP-205ENST00000490035 N4BP1O75113 896 aaKnown RBP9.85□□□□□ -0.83
LSAMP-205ENST00000490035 TPD52P55327 224 aaPredicted RBP9.85□□□□□ -0.83
LSAMP-205ENST00000490035 NLRP12P59046 1061 aa9.85□□□□□ -0.83
LSAMP-205ENST00000490035 ZSWIM4Q9H7M6 989 aa9.85□□□□□ -0.83
LSAMP-205ENST00000490035 ARL1P40616 181 aaPredicted RBP9.85□□□□□ -0.83
LSAMP-205ENST00000490035 UBLCP1Q8WVY7 318 aaPredicted RBP9.85□□□□□ -0.83
LSAMP-205ENST00000490035 GBP6Q6ZN66 633 aa9.85□□□□□ -0.83
LSAMP-205ENST00000490035 ZNF365Q70YC5 407 aa9.85□□□□□ -0.83
LSAMP-205ENST00000490035 ZNF830Q96NB3 372 aaPredicted RBP9.85□□□□□ -0.83
LSAMP-205ENST00000490035 CLSTN2Q9H4D0 955 aa9.85□□□□□ -0.83
LSAMP-205ENST00000490035 FAM83GA6ND36 823 aa9.85□□□□□ -0.83
LSAMP-205ENST00000490035 POLD1P28340 1107 aa9.85□□□□□ -0.83
LSAMP-205ENST00000490035 PRPF31Q8WWY3 499 aaKnown RBP9.85□□□□□ -0.83
LSAMP-205ENST00000490035 EIF3CLB5ME19 914 aaKnown RBP9.85□□□□□ -0.83
LSAMP-205ENST00000490035 EVCP57679 992 aa9.85□□□□□ -0.83
LSAMP-205ENST00000490035 SARNPP82979 210 aaKnown RBP9.85□□□□□ -0.83
LSAMP-205ENST00000490035 ZNF710Q8N1W2 664 aa9.85□□□□□ -0.83
LSAMP-205ENST00000490035 KIFC2Q96AC6 838 aa9.85□□□□□ -0.83
LSAMP-205ENST00000490035 EIF3CQ99613 913 aaKnown RBP9.85□□□□□ -0.83
LSAMP-205ENST00000490035 EYA2O00167 538 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 SPOPO43791 374 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 C8orf58Q8NAV2 365 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 NSMCE1Q8WV22 266 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 LRRC59Q96AG4 307 aaKnown RBP9.84□□□□□ -0.83
LSAMP-205ENST00000490035 TYW1Q9NV66 732 aaKnown RBP9.84□□□□□ -0.83
LSAMP-205ENST00000490035 BLMP54132 1417 aaPredicted RBP9.84□□□□□ -0.83
LSAMP-205ENST00000490035 RNMTO43148 476 aaKnown RBP9.84□□□□□ -0.83
LSAMP-205ENST00000490035 GRK7Q8WTQ7 553 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 PICK1Q9NRD5 415 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 TRIM58Q8NG06 486 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 BICC1Q9H694 974 aaKnown RBP9.84□□□□□ -0.83
LSAMP-205ENST00000490035 RTEL1Q9NZ71 1219 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 DNM3Q9UQ16 869 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 BRD3Q15059 726 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 CCT6AP40227 531 aaKnown RBP9.84□□□□□ -0.83
LSAMP-205ENST00000490035 NEDD9Q14511 834 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 I3L4J1 428 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 APOBRQ0VD83 1088 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 OTUD6AQ7L8S5 288 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 PHBP35232 272 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 PDE4DQ08499 809 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 SECISBP2LQ93073 1101 aaKnown RBP9.84□□□□□ -0.83
LSAMP-205ENST00000490035 KCNK9Q9NPC2 374 aa9.84□□□□□ -0.83
LSAMP-205ENST00000490035 FBXO31Q5XUX0 539 aaPredicted RBP9.83□□□□□ -0.84
LSAMP-205ENST00000490035 KBTBD3Q8NAB2 608 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 LEO1Q8WVC0 666 aaPredicted RBP9.83□□□□□ -0.84
LSAMP-205ENST00000490035 IFT81Q8WYA0 676 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 LPIN2Q92539 896 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 A0A1B0GVL5 298 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 PSDA5PKW4 1024 aaPredicted RBP9.83□□□□□ -0.84
LSAMP-205ENST00000490035 APBA1Q02410 837 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 TAF12Q16514 161 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 CSGALNACT2Q8N6G5 542 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 LZTFL1Q9NQ48 299 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 PFDN4Q9NQP4 134 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 VWA3AA6NCI4 1184 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 CCDC160A6NGH7 325 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 ZBTB7BO15156 539 aaPredicted RBP9.83□□□□□ -0.84
LSAMP-205ENST00000490035 CCNT1O60563 726 aaKnown RBP9.83□□□□□ -0.84
LSAMP-205ENST00000490035 SETSIPP0DME0 302 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 DCAF17Q5H9S7 520 aaPredicted RBP9.83□□□□□ -0.84
LSAMP-205ENST00000490035 GPATCH11Q8N954 259 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 CPSF2Q9P2I0 782 aaKnown RBP9.83□□□□□ -0.84
LSAMP-205ENST00000490035 A0A1W2PP64 1363 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 NBPF14Q5TI25 921 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 ZNF277Q9NRM2 450 aaPredicted RBP9.83□□□□□ -0.84
LSAMP-205ENST00000490035 TBX22Q9Y458 520 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 FAM135BQ49AJ0 1406 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 THAP12O43422 761 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 ZEB2O60315 1214 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 ZNF274Q96GC6 653 aaPredicted RBP9.83□□□□□ -0.84
LSAMP-205ENST00000490035 TMX1Q9H3N1 280 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 DNM2P50570 870 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 RBM6P78332 1123 aaKnown RBP9.83□□□□□ -0.84
LSAMP-205ENST00000490035 POSTNQ15063 836 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 SH3TC1Q8TE82 1336 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 PPFIA4O75335 1185 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms