RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.81■■□□□ 1.4
TNFRSF1B-202ENST00000489921 AATFQ9NY61 560 aaKnown RBP eCLIP23.81■■□□□ 1.4
TNFRSF1B-202ENST00000489921 ECM2O94769 699 aaPredicted RBP23.8■■□□□ 1.4
TNFRSF1B-202ENST00000489921 PSMC4P43686 418 aa23.8■■□□□ 1.4
TNFRSF1B-202ENST00000489921 PRPF38BQ5VTL8 546 aaKnown RBP23.79■■□□□ 1.4
TNFRSF1B-202ENST00000489921 SH3TC2Q8TF17 1288 aa23.79■■□□□ 1.4
TNFRSF1B-202ENST00000489921 PARK7Q99497 189 aaKnown RBP23.79■■□□□ 1.4
TNFRSF1B-202ENST00000489921 EXOC6BQ9Y2D4 811 aa23.79■■□□□ 1.4
TNFRSF1B-202ENST00000489921 TRIM75PA6NK02 468 aa23.78■■□□□ 1.4
TNFRSF1B-202ENST00000489921 OSBPP22059 807 aa23.78■■□□□ 1.4
TNFRSF1B-202ENST00000489921 GADL1Q6ZQY3 521 aa23.78■■□□□ 1.4
TNFRSF1B-202ENST00000489921 NBPF11Q86T75 865 aa23.78■■□□□ 1.4
TNFRSF1B-202ENST00000489921 SRRDQ9UH36 339 aa23.78■■□□□ 1.4
TNFRSF1B-202ENST00000489921 SLC45A1Q9Y2W3 748 aa23.78■■□□□ 1.4
TNFRSF1B-202ENST00000489921 NDUFB9Q9Y6M9 179 aa23.78■■□□□ 1.4
TNFRSF1B-202ENST00000489921 LOC285556D6RIA3 1793 aa23.78■■□□□ 1.4
TNFRSF1B-202ENST00000489921 CAP2P40123 477 aa23.77■■□□□ 1.4
TNFRSF1B-202ENST00000489921 PRMT2P55345 433 aa23.77■■□□□ 1.4
TNFRSF1B-202ENST00000489921 METTL16Q86W50 562 aaKnown RBP23.77■■□□□ 1.4
TNFRSF1B-202ENST00000489921 IGSF3O75054 1194 aa23.76■■□□□ 1.39
TNFRSF1B-202ENST00000489921 SLC34A2O95436 690 aa23.76■■□□□ 1.39
TNFRSF1B-202ENST00000489921 BAG3O95817 575 aa23.76■■□□□ 1.39
TNFRSF1B-202ENST00000489921 JAG1P78504 1218 aa23.76■■□□□ 1.39
TNFRSF1B-202ENST00000489921 TGFBRAP1Q8WUH2 860 aa23.76■■□□□ 1.39
TNFRSF1B-202ENST00000489921 DNAJC18Q9H819 358 aa23.76■■□□□ 1.39
TNFRSF1B-202ENST00000489921 PI4KBQ9UBF8 816 aa23.76■■□□□ 1.39
TNFRSF1B-202ENST00000489921 HERC5Q9UII4 1024 aaKnown RBP23.76■■□□□ 1.39
TNFRSF1B-202ENST00000489921 FLT1P17948 1338 aa23.76■■□□□ 1.39
TNFRSF1B-202ENST00000489921 PLCG2P16885 1265 aa23.75■■□□□ 1.39
TNFRSF1B-202ENST00000489921 DYNLL1P63167 89 aaKnown RBP23.75■■□□□ 1.39
TNFRSF1B-202ENST00000489921 TREML2Q5T2D2 321 aa23.75■■□□□ 1.39
TNFRSF1B-202ENST00000489921 MAPKAPK5Q8IW41 473 aa23.75■■□□□ 1.39
TNFRSF1B-202ENST00000489921 SIRT2Q8IXJ6 389 aa23.75■■□□□ 1.39
TNFRSF1B-202ENST00000489921 ANTXR1Q9H6X2 564 aa23.75■■□□□ 1.39
TNFRSF1B-202ENST00000489921 AGTPBP1Q9UPW5 1226 aa23.75■■□□□ 1.39
TNFRSF1B-202ENST00000489921 SPP2Q13103 211 aa23.74■■□□□ 1.39
TNFRSF1B-202ENST00000489921 NOL10Q9BSC4 688 aaKnown RBP23.74■■□□□ 1.39
TNFRSF1B-202ENST00000489921 TMEM106CQ9BVX2 250 aa23.74■■□□□ 1.39
TNFRSF1B-202ENST00000489921 DHX36Q9H2U1 1008 aaKnown RBP23.74■■□□□ 1.39
TNFRSF1B-202ENST00000489921 FMNL1O95466 1100 aaPredicted RBP23.73■■□□□ 1.39
TNFRSF1B-202ENST00000489921 MYCP01106 439 aaPredicted RBP23.73■■□□□ 1.39
TNFRSF1B-202ENST00000489921 ZNF280CQ8ND82 737 aa23.73■■□□□ 1.39
TNFRSF1B-202ENST00000489921 ZBTB40Q9NUA8 1239 aa23.73■■□□□ 1.39
TNFRSF1B-202ENST00000489921 PALD1Q9ULE6 856 aa23.73■■□□□ 1.39
TNFRSF1B-202ENST00000489921 MYH1P12882 1939 aa23.72■■□□□ 1.39
TNFRSF1B-202ENST00000489921 CYP7A1P22680 504 aa23.72■■□□□ 1.39
TNFRSF1B-202ENST00000489921 MTFR1Q15390 333 aa23.72■■□□□ 1.39
TNFRSF1B-202ENST00000489921 SHROOM1Q2M3G4 852 aaPredicted RBP23.72■■□□□ 1.39
TNFRSF1B-202ENST00000489921 AACSQ86V21 672 aa23.72■■□□□ 1.39
TNFRSF1B-202ENST00000489921 ERC1Q8IUD2 1116 aa23.72■■□□□ 1.39
TNFRSF1B-202ENST00000489921 PROCA1Q8NCQ7 364 aaPredicted RBP23.72■■□□□ 1.39
TNFRSF1B-202ENST00000489921 RHPN1Q8TCX5 695 aa23.72■■□□□ 1.39
TNFRSF1B-202ENST00000489921 GABRQQ9UN88 632 aa23.72■■□□□ 1.39
TNFRSF1B-202ENST00000489921 DOCK3Q8IZD9 2030 aa23.72■■□□□ 1.39
TNFRSF1B-202ENST00000489921 MYPNQ86TC9 1320 aa23.71■■□□□ 1.39
TNFRSF1B-202ENST00000489921 USP17L5A8MUK1 530 aa23.71■■□□□ 1.39
TNFRSF1B-202ENST00000489921 HOXD10P28358 340 aa23.71■■□□□ 1.39
TNFRSF1B-202ENST00000489921 PRKCZQ05513 592 aa23.71■■□□□ 1.39
TNFRSF1B-202ENST00000489921 SH3D19Q5HYK7 790 aa23.71■■□□□ 1.39
TNFRSF1B-202ENST00000489921 IL1RAPL2Q9NP60 686 aa23.71■■□□□ 1.39
TNFRSF1B-202ENST00000489921 COG6Q9Y2V7 657 aa23.71■■□□□ 1.39
TNFRSF1B-202ENST00000489921 IDH1O75874 414 aaKnown RBP23.7■■□□□ 1.38
TNFRSF1B-202ENST00000489921 MS4A1P11836 297 aa23.7■■□□□ 1.38
TNFRSF1B-202ENST00000489921 HMGCS2P54868 508 aa23.7■■□□□ 1.38
TNFRSF1B-202ENST00000489921 FCGRTP55899 365 aa23.7■■□□□ 1.38
TNFRSF1B-202ENST00000489921 SLC4A8Q2Y0W8 1093 aa23.7■■□□□ 1.38
TNFRSF1B-202ENST00000489921 FOXP4Q8IVH2 680 aaPredicted RBP23.7■■□□□ 1.38
TNFRSF1B-202ENST00000489921 TBC1D2Q9BYX2 928 aa23.7■■□□□ 1.38
TNFRSF1B-202ENST00000489921 GRK4P32298 578 aa23.69■■□□□ 1.38
TNFRSF1B-202ENST00000489921 RPAP2Q8IXW5 612 aaPredicted RBP23.69■■□□□ 1.38
TNFRSF1B-202ENST00000489921 MAGEB6Q8N7X4 407 aa23.69■■□□□ 1.38
TNFRSF1B-202ENST00000489921 MIGA1Q8NAN2 632 aa23.69■■□□□ 1.38
TNFRSF1B-202ENST00000489921 RAET1EQ8TD07 263 aa23.69■■□□□ 1.38
TNFRSF1B-202ENST00000489921 WDR18Q9BV38 432 aa23.69■■□□□ 1.38
TNFRSF1B-202ENST00000489921 SAP30BPQ9UHR5 308 aaKnown RBP23.69■■□□□ 1.38
TNFRSF1B-202ENST00000489921 DDX19BQ9UMR2 479 aa23.68■■□□□ 1.38
TNFRSF1B-202ENST00000489921 HSP90AB4PQ58FF6 505 aa23.67■■□□□ 1.38
TNFRSF1B-202ENST00000489921 ANKRD13CQ8N6S4 541 aa23.67■■□□□ 1.38
TNFRSF1B-202ENST00000489921 SMCR8Q8TEV9 937 aaPredicted RBP23.67■■□□□ 1.38
TNFRSF1B-202ENST00000489921 SHISA4Q96DD7 197 aa23.67■■□□□ 1.38
TNFRSF1B-202ENST00000489921 RIOK1Q9BRS2 568 aaKnown RBP23.66■■□□□ 1.38
TNFRSF1B-202ENST00000489921 RCAN3Q9UKA8 241 aa23.66■■□□□ 1.38
TNFRSF1B-202ENST00000489921 DDX60LQ5H9U9 1706 aaKnown RBP23.66■■□□□ 1.38
TNFRSF1B-202ENST00000489921 GDF11O95390 407 aa23.65■■□□□ 1.38
TNFRSF1B-202ENST00000489921 ASNSP08243 561 aa23.65■■□□□ 1.38
TNFRSF1B-202ENST00000489921 BACE1P56817 501 aa23.65■■□□□ 1.38
TNFRSF1B-202ENST00000489921 C20orf194Q5TEA3 1177 aa23.65■■□□□ 1.38
TNFRSF1B-202ENST00000489921 KIF1BPQ96EK5 621 aa23.65■■□□□ 1.38
TNFRSF1B-202ENST00000489921 ASCC2Q9H1I8 757 aaPredicted RBP23.65■■□□□ 1.38
TNFRSF1B-202ENST00000489921 AS3MTQ9HBK9 375 aa23.65■■□□□ 1.38
TNFRSF1B-202ENST00000489921 PNMA3Q9UL41 463 aa23.65■■□□□ 1.38
TNFRSF1B-202ENST00000489921 APBB1O00213 710 aa23.64■■□□□ 1.37
TNFRSF1B-202ENST00000489921 FLT3LGP49771 235 aa23.64■■□□□ 1.37
TNFRSF1B-202ENST00000489921 MAP3K12Q12852 859 aa23.64■■□□□ 1.37
TNFRSF1B-202ENST00000489921 MTMR2Q13614 643 aa23.64■■□□□ 1.37
TNFRSF1B-202ENST00000489921 FAM110CQ1W6H9 321 aa23.64■■□□□ 1.37
TNFRSF1B-202ENST00000489921 TMED8Q6PL24 325 aaPredicted RBP23.64■■□□□ 1.37
TNFRSF1B-202ENST00000489921 CRACR2BQ8N4Y2 399 aaPredicted RBP23.64■■□□□ 1.37
TNFRSF1B-202ENST00000489921 CCL5P13501 91 aa23.63■■□□□ 1.37
TNFRSF1B-202ENST00000489921 TATDN1Q6P1N9 297 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms