RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 FAM84BQ96KN1 310 aaPredicted RBP9.34□□□□□ -0.91
COL9A1-209ENST00000489861 MAP3K2Q9Y2U5 619 aa9.34□□□□□ -0.91
COL9A1-209ENST00000489861 LAS1LQ9Y4W2 734 aaKnown RBP9.34□□□□□ -0.91
COL9A1-209ENST00000489861 SMCHD1A6NHR9 2005 aa9.34□□□□□ -0.91
COL9A1-209ENST00000489861 MAPK8IP3Q9UPT6 1336 aa9.33□□□□□ -0.92
COL9A1-209ENST00000489861 GRXCR1A8MXD5 290 aa9.33□□□□□ -0.92
COL9A1-209ENST00000489861 SLURP2P0DP57 97 aa9.33□□□□□ -0.92
COL9A1-209ENST00000489861 ZKSCAN1P17029 563 aaPredicted RBP9.33□□□□□ -0.92
COL9A1-209ENST00000489861 GCLCP48506 637 aaPredicted RBP9.33□□□□□ -0.92
COL9A1-209ENST00000489861 NFIAQ12857 509 aa9.33□□□□□ -0.92
COL9A1-209ENST00000489861 ZFPM1Q8IX07 1006 aa9.33□□□□□ -0.92
COL9A1-209ENST00000489861 NUDT12Q9BQG2 462 aa9.33□□□□□ -0.92
COL9A1-209ENST00000489861 PLA2G12BQ9BX93 195 aa9.33□□□□□ -0.92
COL9A1-209ENST00000489861 PBX4Q9BYU1 374 aa9.33□□□□□ -0.92
COL9A1-209ENST00000489861 IQSEC3Q9UPP2 1182 aaPredicted RBP9.33□□□□□ -0.92
COL9A1-209ENST00000489861 ATRNL1Q5VV63 1379 aa9.33□□□□□ -0.92
COL9A1-209ENST00000489861 ZFHX2Q9C0A1 2572 aaPredicted RBP9.32□□□□□ -0.92
COL9A1-209ENST00000489861 DNM1LO00429 736 aa9.32□□□□□ -0.92
COL9A1-209ENST00000489861 PLIN1O60240 522 aa9.32□□□□□ -0.92
COL9A1-209ENST00000489861 CASP7P55210 303 aa9.32□□□□□ -0.92
COL9A1-209ENST00000489861 SNX17Q15036 470 aa9.32□□□□□ -0.92
COL9A1-209ENST00000489861 GJC2Q5T442 439 aaPredicted RBP9.32□□□□□ -0.92
COL9A1-209ENST00000489861 CD320Q9NPF0 282 aa9.32□□□□□ -0.92
COL9A1-209ENST00000489861 PICK1Q9NRD5 415 aa9.32□□□□□ -0.92
COL9A1-209ENST00000489861 PNMA3Q9UL41 463 aa9.32□□□□□ -0.92
COL9A1-209ENST00000489861 RIF1Q5UIP0 2472 aaKnown RBP9.32□□□□□ -0.92
COL9A1-209ENST00000489861 CACNA1HO95180 2353 aa9.31□□□□□ -0.92
COL9A1-209ENST00000489861 EPG5Q9HCE0 2579 aa9.31□□□□□ -0.92
COL9A1-209ENST00000489861 ATAD5Q96QE3 1844 aa9.31□□□□□ -0.92
COL9A1-209ENST00000489861 ANKRD18BA2A2Z9 1011 aa9.31□□□□□ -0.92
COL9A1-209ENST00000489861 NEURL1BA8MQ27 555 aa9.31□□□□□ -0.92
COL9A1-209ENST00000489861 PI4K2BG5E9Z4 385 aa9.31□□□□□ -0.92
COL9A1-209ENST00000489861 TLL1O43897 1013 aa9.31□□□□□ -0.92
COL9A1-209ENST00000489861 HIBADHP31937 336 aaKnown RBP9.31□□□□□ -0.92
COL9A1-209ENST00000489861 TMPOP42166 694 aaKnown RBP9.31□□□□□ -0.92
COL9A1-209ENST00000489861 CHAF1AQ13111 956 aaPredicted RBP9.31□□□□□ -0.92
COL9A1-209ENST00000489861 LPAR1Q92633 364 aa9.31□□□□□ -0.92
COL9A1-209ENST00000489861 FBXL18Q96ME1 805 aa9.31□□□□□ -0.92
COL9A1-209ENST00000489861 PHOX2BQ99453 314 aa9.31□□□□□ -0.92
COL9A1-209ENST00000489861 MRIQ9BWK5 157 aa9.31□□□□□ -0.92
COL9A1-209ENST00000489861 ASCC2Q9H1I8 757 aaPredicted RBP9.31□□□□□ -0.92
COL9A1-209ENST00000489861 TXNRD2Q9NNW7 524 aa9.31□□□□□ -0.92
COL9A1-209ENST00000489861 FLRT1Q9NZU1 646 aa9.31□□□□□ -0.92
COL9A1-209ENST00000489861 MORF4L1Q9UBU8 362 aa9.31□□□□□ -0.92
COL9A1-209ENST00000489861 FAM198AQ9UFP1 575 aa9.31□□□□□ -0.92
COL9A1-209ENST00000489861 DDX20Q9UHI6 824 aaKnown RBP9.31□□□□□ -0.92
COL9A1-209ENST00000489861 PI4KAP2A4QPH2 592 aa9.3□□□□□ -0.92
COL9A1-209ENST00000489861 CDC42EP5Q6NZY7 148 aa9.3□□□□□ -0.92
COL9A1-209ENST00000489861 TRMT44Q8IYL2 757 aaKnown RBP9.3□□□□□ -0.92
COL9A1-209ENST00000489861 PI4KAP1Q8N8J0 262 aa9.3□□□□□ -0.92
COL9A1-209ENST00000489861 SOCS4Q8WXH5 440 aa9.3□□□□□ -0.92
COL9A1-209ENST00000489861 ZNF594Q96JF6 807 aaPredicted RBP9.3□□□□□ -0.92
COL9A1-209ENST00000489861 MYH13Q9UKX3 1938 aa9.3□□□□□ -0.92
COL9A1-209ENST00000489861 TRIOO75962 3097 aa9.3□□□□□ -0.92
COL9A1-209ENST00000489861 TPRP12270 2363 aaKnown RBP9.29□□□□□ -0.92
COL9A1-209ENST00000489861 PRR33A8MZF0 331 aa9.29□□□□□ -0.92
COL9A1-209ENST00000489861 ELL2O00472 640 aaPredicted RBP9.29□□□□□ -0.92
COL9A1-209ENST00000489861 ERC2O15083 957 aa9.29□□□□□ -0.92
COL9A1-209ENST00000489861 TLE2Q04725 743 aa9.29□□□□□ -0.92
COL9A1-209ENST00000489861 LMOD3Q0VAK6 560 aa9.29□□□□□ -0.92
COL9A1-209ENST00000489861 AAK1Q2M2I8 961 aa9.29□□□□□ -0.92
COL9A1-209ENST00000489861 MORN1Q5T089 497 aa9.29□□□□□ -0.92
COL9A1-209ENST00000489861 HHIPL2Q6UWX4 724 aa9.29□□□□□ -0.92
COL9A1-209ENST00000489861 KSR2Q6VAB6 950 aa9.29□□□□□ -0.92
COL9A1-209ENST00000489861 MICALL1Q8N3F8 863 aa9.29□□□□□ -0.92
COL9A1-209ENST00000489861 PROCA1Q8NCQ7 364 aaPredicted RBP9.29□□□□□ -0.92
COL9A1-209ENST00000489861 TRPV1Q8NER1 839 aa9.29□□□□□ -0.92
COL9A1-209ENST00000489861 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.29□□□□□ -0.92
COL9A1-209ENST00000489861 TSPYL2Q9H2G4 693 aaPredicted RBP9.29□□□□□ -0.92
COL9A1-209ENST00000489861 C5orf42Q9H799 3197 aa9.28□□□□□ -0.92
COL9A1-209ENST00000489861 FAM186AA6NE01 2351 aa9.28□□□□□ -0.92
COL9A1-209ENST00000489861 DDX58O95786 925 aaKnown RBP9.28□□□□□ -0.92
COL9A1-209ENST00000489861 CNGA1P29973 690 aa9.28□□□□□ -0.92
COL9A1-209ENST00000489861 RGS2P41220 211 aa9.28□□□□□ -0.92
COL9A1-209ENST00000489861 FPGSQ05932 587 aa9.28□□□□□ -0.92
COL9A1-209ENST00000489861 Q3C1V9 767 aa9.28□□□□□ -0.92
COL9A1-209ENST00000489861 C1orf53Q5VUE5 145 aa9.28□□□□□ -0.92
COL9A1-209ENST00000489861 CCDC129Q6ZRS4 1044 aa9.28□□□□□ -0.92
COL9A1-209ENST00000489861 SH3BP5LQ7L8J4 393 aa9.28□□□□□ -0.92
COL9A1-209ENST00000489861 FBXO33Q7Z6M2 555 aa9.28□□□□□ -0.92
COL9A1-209ENST00000489861 FERMT2Q96AC1 680 aa9.28□□□□□ -0.92
COL9A1-209ENST00000489861 APBA2Q99767 749 aa9.28□□□□□ -0.92
COL9A1-209ENST00000489861 PORCNQ9H237 461 aa9.28□□□□□ -0.92
COL9A1-209ENST00000489861 TRIM35Q9UPQ4 493 aa9.28□□□□□ -0.92
COL9A1-209ENST00000489861 MYH2Q9UKX2 1941 aa9.27□□□□□ -0.93
COL9A1-209ENST00000489861 BAHCC1Q9P281 2608 aa9.27□□□□□ -0.93
COL9A1-209ENST00000489861 KIAA0355O15063 1070 aa9.27□□□□□ -0.93
COL9A1-209ENST00000489861 CTNND1O60716 968 aaKnown RBP9.27□□□□□ -0.93
COL9A1-209ENST00000489861 ADCYAP1R1P41586 468 aa9.27□□□□□ -0.93
COL9A1-209ENST00000489861 HMGCS2P54868 508 aa9.27□□□□□ -0.93
COL9A1-209ENST00000489861 FOXO4P98177 505 aa9.27□□□□□ -0.93
COL9A1-209ENST00000489861 MAP3K10Q02779 954 aa9.27□□□□□ -0.93
COL9A1-209ENST00000489861 SPP2Q13103 211 aa9.27□□□□□ -0.93
COL9A1-209ENST00000489861 IFIT5Q13325 482 aaKnown RBP9.27□□□□□ -0.93
COL9A1-209ENST00000489861 UBE4AQ14139 1066 aa9.27□□□□□ -0.93
COL9A1-209ENST00000489861 GCKRQ14397 625 aa9.27□□□□□ -0.93
COL9A1-209ENST00000489861 NEUROD2Q15784 382 aa9.27□□□□□ -0.93
COL9A1-209ENST00000489861 RASIP1Q5U651 963 aa9.27□□□□□ -0.93
COL9A1-209ENST00000489861 C16orf59Q7L2K0 433 aa9.27□□□□□ -0.93
COL9A1-209ENST00000489861 GPR142Q7Z601 462 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms