RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 SH2B2O14492 632 aaPredicted RBP11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 OFD1O75665 1012 aa11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 MBD4O95243 580 aa11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 CAVIN2O95810 425 aa11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 TPM3P06753 285 aa11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 GNAT2P19087 354 aa11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 ADD1P35611 737 aaKnown RBP11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 RASGRF1Q13972 1273 aa11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 SWT1Q5T5J6 900 aaKnown RBP11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 BRAPQ7Z569 592 aa11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 SLF2Q8IX21 1173 aa11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 MAGEB6Q8N7X4 407 aa11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 STRBPQ96SI9 672 aaKnown RBP11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 NAPBQ9H115 298 aa11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 ORC3Q9UBD5 711 aaPredicted RBP11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 MRVI1Q9Y6F6 885 aa11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 MAST2Q6P0Q8 1798 aa11.15□□□□□ -0.62
RAB3GAP1-205ENST00000489858 PNPLA7Q6ZV29 1317 aa11.14□□□□□ -0.63
RAB3GAP1-205ENST00000489858 CNTNAP4Q9C0A0 1308 aa11.14□□□□□ -0.63
RAB3GAP1-205ENST00000489858 GOLGA6L6A8MZA4 724 aa11.14□□□□□ -0.63
RAB3GAP1-205ENST00000489858 METAP2P50579 478 aaKnown RBP eCLIP11.14□□□□□ -0.63
RAB3GAP1-205ENST00000489858 GUCY1B3Q02153 619 aa11.14□□□□□ -0.63
RAB3GAP1-205ENST00000489858 KIAA2012Q0VF49 1180 aa11.14□□□□□ -0.63
RAB3GAP1-205ENST00000489858 CAMK4Q16566 473 aa11.14□□□□□ -0.63
RAB3GAP1-205ENST00000489858 CLEC4GQ6UXB4 293 aa11.14□□□□□ -0.63
RAB3GAP1-205ENST00000489858 CCAR1Q8IX12 1150 aaKnown RBP11.14□□□□□ -0.63
RAB3GAP1-205ENST00000489858 USP28Q96RU2 1077 aa11.14□□□□□ -0.63
RAB3GAP1-205ENST00000489858 NACAP1Q9BZK3 213 aa11.14□□□□□ -0.63
RAB3GAP1-205ENST00000489858 CNNM2Q9H8M5 875 aa11.14□□□□□ -0.63
RAB3GAP1-205ENST00000489858 SEC31BQ9NQW1 1179 aa11.14□□□□□ -0.63
RAB3GAP1-205ENST00000489858 PATL2C9JE40 543 aaKnown RBP11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 KINO60870 393 aaKnown RBP11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 NR1I2O75469 434 aa11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 YEATS4O95619 227 aa11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 TPM2P07951 284 aa11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 FDPSP14324 419 aaKnown RBP11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 CEBPZQ03701 1054 aaKnown RBP11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 FAM160A1Q05DH4 1040 aa11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 CHRNDQ07001 517 aa11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 STK38Q15208 465 aa11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 ANO6Q4KMQ2 910 aa11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 CYB5R4Q7L1T6 521 aa11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 CKAP2LQ8IYA6 745 aa11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 FSIP1Q8NA03 581 aa11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 FBXO18Q8NFZ0 1043 aa11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 MRPS27Q92552 414 aaKnown RBP11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 KRT23Q9C075 422 aa11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 GNL3LQ9NVN8 582 aaKnown RBP11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 RTEL1Q9NZ71 1219 aa11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 NID2Q14112 1375 aa11.13□□□□□ -0.63
RAB3GAP1-205ENST00000489858 NEDD4P46934 1319 aa11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 STK36Q9NRP7 1315 aa11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 GOLGA8AA7E2F4 631 aa11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 B4E1Z4 1266 aa11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 ZBTB43O43298 467 aa11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 ME1P48163 572 aa11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 STX1AQ16623 288 aa11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 TMEM67Q5HYA8 995 aa11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 NFXL1Q6ZNB6 911 aa11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 SGMS1Q86VZ5 419 aa11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 ANKRD18AQ8IVF6 992 aa11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 IFNL3Q8IZI9 196 aa11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 TDRD7Q8NHU6 1098 aaKnown RBP11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 KCNG4Q8TDN1 519 aa11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 ARMT1Q9H993 441 aa11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 EPB41L4AQ9HCS5 686 aaPredicted RBP11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 BTAF1O14981 1849 aa11.12□□□□□ -0.63
RAB3GAP1-205ENST00000489858 THSD7AQ9UPZ6 1657 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 A0A1W2PQ27 194 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 A0A1W2PQ64 194 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 A0A1W2PQD8 194 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 NRG2O14511 850 aaPredicted RBP11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 LCE2BO14633 110 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 TOM1O60784 492 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 TDO2P48775 406 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 PLCB2Q00722 1185 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 UBE4AQ14139 1066 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 SART3Q15020 963 aaKnown RBP11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 SF3B3Q15393 1217 aaKnown RBP11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 SF3A1Q15459 793 aaKnown RBP11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 VPS72Q15906 364 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 TRAF7Q6Q0C0 670 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 APOA5Q6Q788 366 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 SYNE3Q6ZMZ3 975 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 LINC00116Q8NCU8 138 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 MTA3Q9BTC8 594 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 NYXQ9GZU5 481 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 RNF41Q9H4P4 317 aaPredicted RBP11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 CBX8Q9HC52 389 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 POLR3EQ9NVU0 708 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 MYH13Q9UKX3 1938 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 COL4A1P02462 1669 aa11.11□□□□□ -0.63
RAB3GAP1-205ENST00000489858 ZNF804BA4D1E1 1349 aa11.1□□□□□ -0.63
RAB3GAP1-205ENST00000489858 CCDC69A6NI79 296 aa11.1□□□□□ -0.63
RAB3GAP1-205ENST00000489858 LIFRP42702 1097 aa11.1□□□□□ -0.63
RAB3GAP1-205ENST00000489858 TERF1P54274 439 aa11.1□□□□□ -0.63
RAB3GAP1-205ENST00000489858 KIF23Q02241 960 aaPredicted RBP11.1□□□□□ -0.63
RAB3GAP1-205ENST00000489858 TRIM29Q14134 588 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms