RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 DOCK1Q14185 1865 aa18.52■□□□□ 0.56
SDHAF3-204ENST00000489852 BMP1P13497 986 aa18.52■□□□□ 0.56
SDHAF3-204ENST00000489852 CAVIN4Q5BKX8 364 aa18.52■□□□□ 0.56
SDHAF3-204ENST00000489852 PDLIM7Q9NR12 457 aa18.52■□□□□ 0.56
SDHAF3-204ENST00000489852 DDX20Q9UHI6 824 aaKnown RBP18.52■□□□□ 0.56
SDHAF3-204ENST00000489852 DAGLAQ9Y4D2 1042 aa18.52■□□□□ 0.56
SDHAF3-204ENST00000489852 DOCK2Q92608 1830 aa18.51■□□□□ 0.55
SDHAF3-204ENST00000489852 TRIM43BA6NCK2 446 aa18.51■□□□□ 0.55
SDHAF3-204ENST00000489852 SH3RF1Q7Z6J0 888 aa18.51■□□□□ 0.55
SDHAF3-204ENST00000489852 USP6NLQ92738 828 aa18.51■□□□□ 0.55
SDHAF3-204ENST00000489852 TRIM43Q96BQ3 446 aaPredicted RBP18.51■□□□□ 0.55
SDHAF3-204ENST00000489852 RUNDC1Q96C34 613 aa18.51■□□□□ 0.55
SDHAF3-204ENST00000489852 P2RX7Q99572 595 aaKnown RBP18.51■□□□□ 0.55
SDHAF3-204ENST00000489852 STK31Q9BXU1 1019 aa18.51■□□□□ 0.55
SDHAF3-204ENST00000489852 PRDM12Q9H4Q4 367 aa18.51■□□□□ 0.55
SDHAF3-204ENST00000489852 USP40Q9NVE5 1235 aa18.51■□□□□ 0.55
SDHAF3-204ENST00000489852 IFT57Q9NWB7 429 aa18.51■□□□□ 0.55
SDHAF3-204ENST00000489852 XIRP2A4UGR9 3374 aa18.5■□□□□ 0.55
SDHAF3-204ENST00000489852 MSCO60682 206 aa18.5■□□□□ 0.55
SDHAF3-204ENST00000489852 MRE11P49959 708 aa18.5■□□□□ 0.55
SDHAF3-204ENST00000489852 EPHB4P54760 987 aa18.5■□□□□ 0.55
SDHAF3-204ENST00000489852 GNAI1P63096 354 aa18.5■□□□□ 0.55
SDHAF3-204ENST00000489852 MAP3K10Q02779 954 aa18.5■□□□□ 0.55
SDHAF3-204ENST00000489852 SPP2Q13103 211 aa18.5■□□□□ 0.55
SDHAF3-204ENST00000489852 TRIM60Q495X7 471 aa18.5■□□□□ 0.55
SDHAF3-204ENST00000489852 G2E3Q7L622 706 aa18.5■□□□□ 0.55
SDHAF3-204ENST00000489852 LINS1Q8NG48 757 aa18.5■□□□□ 0.55
SDHAF3-204ENST00000489852 APBA2Q99767 749 aa18.5■□□□□ 0.55
SDHAF3-204ENST00000489852 TSPYL2Q9H2G4 693 aaPredicted RBP18.5■□□□□ 0.55
SDHAF3-204ENST00000489852 MUC6Q6W4X9 2439 aa18.5■□□□□ 0.55
SDHAF3-204ENST00000489852 RLFQ13129 1914 aa18.49■□□□□ 0.55
SDHAF3-204ENST00000489852 IGFBP4P22692 258 aa18.49■□□□□ 0.55
SDHAF3-204ENST00000489852 CNGA1P29973 690 aa18.49■□□□□ 0.55
SDHAF3-204ENST00000489852 MAPK4P31152 587 aa18.49■□□□□ 0.55
SDHAF3-204ENST00000489852 HMGCS2P54868 508 aa18.49■□□□□ 0.55
SDHAF3-204ENST00000489852 ZSCAN29Q8IWY8 852 aaPredicted RBP18.49■□□□□ 0.55
SDHAF3-204ENST00000489852 CCAR1Q8IX12 1150 aaKnown RBP18.49■□□□□ 0.55
SDHAF3-204ENST00000489852 GPRC5AQ8NFJ5 357 aa18.49■□□□□ 0.55
SDHAF3-204ENST00000489852 CXXC1Q9P0U4 656 aaPredicted RBP18.49■□□□□ 0.55
SDHAF3-204ENST00000489852 LOC285556D6RIA3 1793 aa18.49■□□□□ 0.55
SDHAF3-204ENST00000489852 PEX10O60683 326 aa18.48■□□□□ 0.55
SDHAF3-204ENST00000489852 SLURP2P0DP57 97 aa18.48■□□□□ 0.55
SDHAF3-204ENST00000489852 DIXDC1Q155Q3 683 aa18.48■□□□□ 0.55
SDHAF3-204ENST00000489852 MORN1Q5T089 497 aa18.48■□□□□ 0.55
SDHAF3-204ENST00000489852 GJC2Q5T442 439 aaPredicted RBP18.48■□□□□ 0.55
SDHAF3-204ENST00000489852 MFSD14CQ5VZR4 134 aa18.48■□□□□ 0.55
SDHAF3-204ENST00000489852 GPR37L1O60883 481 aa18.47■□□□□ 0.55
SDHAF3-204ENST00000489852 RGS3P49796 1198 aa18.47■□□□□ 0.55
SDHAF3-204ENST00000489852 IRX3P78415 501 aaPredicted RBP18.47■□□□□ 0.55
SDHAF3-204ENST00000489852 ADGRE1Q14246 886 aa18.47■□□□□ 0.55
SDHAF3-204ENST00000489852 SNX17Q15036 470 aa18.47■□□□□ 0.55
SDHAF3-204ENST00000489852 EPHA10Q5JZY3 1008 aa18.47■□□□□ 0.55
SDHAF3-204ENST00000489852 GPR142Q7Z601 462 aa18.47■□□□□ 0.55
SDHAF3-204ENST00000489852 ARRDC4Q8NCT1 418 aa18.47■□□□□ 0.55
SDHAF3-204ENST00000489852 ZNF280CQ8ND82 737 aa18.47■□□□□ 0.55
SDHAF3-204ENST00000489852 PUS3Q9BZE2 481 aaKnown RBP18.47■□□□□ 0.55
SDHAF3-204ENST00000489852 KBTBD13C9JR72 458 aa18.46■□□□□ 0.55
SDHAF3-204ENST00000489852 ITGB8P26012 769 aa18.46■□□□□ 0.55
SDHAF3-204ENST00000489852 ZEB1P37275 1124 aaPredicted RBP18.46■□□□□ 0.55
SDHAF3-204ENST00000489852 AAK1Q2M2I8 961 aa18.46■□□□□ 0.55
SDHAF3-204ENST00000489852 TSPYL6Q8N831 410 aa18.46■□□□□ 0.55
SDHAF3-204ENST00000489852 DNAAF4Q8WXU2 420 aa18.46■□□□□ 0.55
SDHAF3-204ENST00000489852 TXNRD2Q9NNW7 524 aa18.46■□□□□ 0.55
SDHAF3-204ENST00000489852 MROH5Q6ZUA9 1318 aa18.46■□□□□ 0.55
SDHAF3-204ENST00000489852 ENTPD3O75355 529 aa18.45■□□□□ 0.54
SDHAF3-204ENST00000489852 TFF2Q03403 129 aa18.45■□□□□ 0.54
SDHAF3-204ENST00000489852 SH3BP5LQ7L8J4 393 aa18.45■□□□□ 0.54
SDHAF3-204ENST00000489852 PLEKHH3Q7Z736 793 aa18.45■□□□□ 0.54
SDHAF3-204ENST00000489852 TACC3Q9Y6A5 838 aa18.45■□□□□ 0.54
SDHAF3-204ENST00000489852 UTYO14607 1347 aa18.45■□□□□ 0.54
SDHAF3-204ENST00000489852 SLC4A2P04920 1241 aa18.44■□□□□ 0.54
SDHAF3-204ENST00000489852 FPGSQ05932 587 aa18.44■□□□□ 0.54
SDHAF3-204ENST00000489852 CCDC129Q6ZRS4 1044 aa18.44■□□□□ 0.54
SDHAF3-204ENST00000489852 WDR66Q8TBY9 1149 aa18.44■□□□□ 0.54
SDHAF3-204ENST00000489852 EDC3Q96F86 508 aaKnown RBP18.44■□□□□ 0.54
SDHAF3-204ENST00000489852 PORCNQ9H237 461 aa18.44■□□□□ 0.54
SDHAF3-204ENST00000489852 CWC22Q9HCG8 908 aaKnown RBP18.44■□□□□ 0.54
SDHAF3-204ENST00000489852 C11orf16Q9NQ32 467 aa18.44■□□□□ 0.54
SDHAF3-204ENST00000489852 MYO9BQ13459 2157 aa18.44■□□□□ 0.54
SDHAF3-204ENST00000489852 FAM86C2PA6NEL3 165 aa18.43■□□□□ 0.54
SDHAF3-204ENST00000489852 DDTLA6NHG4 134 aaPredicted RBP18.43■□□□□ 0.54
SDHAF3-204ENST00000489852 RAG1P15918 1043 aa18.43■□□□□ 0.54
SDHAF3-204ENST00000489852 PBX2P40425 430 aa18.43■□□□□ 0.54
SDHAF3-204ENST00000489852 KCNQ1P51787 676 aa18.43■□□□□ 0.54
SDHAF3-204ENST00000489852 HERVK_113P62684 666 aa18.43■□□□□ 0.54
SDHAF3-204ENST00000489852 TLE2Q04725 743 aa18.43■□□□□ 0.54
SDHAF3-204ENST00000489852 CALD1Q05682 793 aaKnown RBP18.43■□□□□ 0.54
SDHAF3-204ENST00000489852 MAP2K5Q13163 448 aa18.43■□□□□ 0.54
SDHAF3-204ENST00000489852 Q3C1V9 767 aa18.43■□□□□ 0.54
SDHAF3-204ENST00000489852 IDI2Q9BXS1 227 aa18.43■□□□□ 0.54
SDHAF3-204ENST00000489852 PBX4Q9BYU1 374 aa18.43■□□□□ 0.54
SDHAF3-204ENST00000489852 TBC1D2Q9BYX2 928 aa18.43■□□□□ 0.54
SDHAF3-204ENST00000489852 FLRT1Q9NZU1 646 aa18.43■□□□□ 0.54
SDHAF3-204ENST00000489852 MYBBP1AQ9BQG0 1328 aaKnown RBP18.43■□□□□ 0.54
SDHAF3-204ENST00000489852 MYCNP04198 464 aaPredicted RBP18.42■□□□□ 0.54
SDHAF3-204ENST00000489852 ERVK-9P63128 1117 aa18.42■□□□□ 0.54
SDHAF3-204ENST00000489852 ERVK-24P63145 666 aa18.42■□□□□ 0.54
SDHAF3-204ENST00000489852 FKBP5Q13451 457 aaPredicted RBP18.42■□□□□ 0.54
SDHAF3-204ENST00000489852 SH3D19Q5HYK7 790 aa18.42■□□□□ 0.54
SDHAF3-204ENST00000489852 C1orf53Q5VUE5 145 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms