RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 PATL2C9JE40 543 aaKnown RBP18.55■□□□□ 0.56
SMIM11A-206ENST00000489469 PRKAB2O43741 272 aa18.55■□□□□ 0.56
SMIM11A-206ENST00000489469 USP2O75604 605 aaPredicted RBP18.55■□□□□ 0.56
SMIM11A-206ENST00000489469 POLR3DP05423 398 aaPredicted RBP18.55■□□□□ 0.56
SMIM11A-206ENST00000489469 PRKG1Q13976 671 aa18.55■□□□□ 0.56
SMIM11A-206ENST00000489469 SKAP1Q86WV1 359 aa18.55■□□□□ 0.56
SMIM11A-206ENST00000489469 ANKRD13AQ8IZ07 590 aa18.55■□□□□ 0.56
SMIM11A-206ENST00000489469 FAM227BQ96M60 508 aa18.55■□□□□ 0.56
SMIM11A-206ENST00000489469 TRIM34Q9BYJ4 488 aa18.55■□□□□ 0.56
SMIM11A-206ENST00000489469 EHD4Q9H223 541 aa18.55■□□□□ 0.56
SMIM11A-206ENST00000489469 PALD1Q9ULE6 856 aa18.55■□□□□ 0.56
SMIM11A-206ENST00000489469 CCDC171Q6TFL3 1326 aa18.54■□□□□ 0.56
SMIM11A-206ENST00000489469 GSG1L2A8MUP6 293 aa18.54■□□□□ 0.56
SMIM11A-206ENST00000489469 APPP05067 770 aa18.54■□□□□ 0.56
SMIM11A-206ENST00000489469 DEFB115Q30KQ5 88 aa18.54■□□□□ 0.56
SMIM11A-206ENST00000489469 LDLRAD1Q5T700 205 aa18.54■□□□□ 0.56
SMIM11A-206ENST00000489469 CWC27Q6UX04 472 aaKnown RBP18.54■□□□□ 0.56
SMIM11A-206ENST00000489469 KLRG1Q96E93 195 aa18.54■□□□□ 0.56
SMIM11A-206ENST00000489469 ARPP21Q9UBL0 812 aaPredicted RBP18.54■□□□□ 0.56
SMIM11A-206ENST00000489469 SAP30BPQ9UHR5 308 aaKnown RBP18.54■□□□□ 0.56
SMIM11A-206ENST00000489469 ATAD5Q96QE3 1844 aa18.53■□□□□ 0.56
SMIM11A-206ENST00000489469 CHMLP26374 656 aa18.53■□□□□ 0.56
SMIM11A-206ENST00000489469 MAP3K9P80192 1104 aa18.53■□□□□ 0.56
SMIM11A-206ENST00000489469 DOCK1Q14185 1865 aa18.53■□□□□ 0.56
SMIM11A-206ENST00000489469 RGMBQ6NW40 437 aa18.53■□□□□ 0.56
SMIM11A-206ENST00000489469 MIGA2Q7L4E1 593 aa18.53■□□□□ 0.56
SMIM11A-206ENST00000489469 METTL16Q86W50 562 aaKnown RBP18.53■□□□□ 0.56
SMIM11A-206ENST00000489469 CRACR2BQ8N4Y2 399 aaPredicted RBP18.53■□□□□ 0.56
SMIM11A-206ENST00000489469 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.53■□□□□ 0.56
SMIM11A-206ENST00000489469 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.53■□□□□ 0.56
SMIM11A-206ENST00000489469 CSADQ9Y600 493 aa18.53■□□□□ 0.56
SMIM11A-206ENST00000489469 UBE2Q2LH0YL09 131 aa18.52■□□□□ 0.56
SMIM11A-206ENST00000489469 ECE1P42892 770 aa18.52■□□□□ 0.56
SMIM11A-206ENST00000489469 TDO2P48775 406 aa18.52■□□□□ 0.56
SMIM11A-206ENST00000489469 SBK1Q52WX2 424 aa18.52■□□□□ 0.56
SMIM11A-206ENST00000489469 CASC1Q6TDU7 716 aa18.52■□□□□ 0.56
SMIM11A-206ENST00000489469 CCDC129Q6ZRS4 1044 aa18.52■□□□□ 0.56
SMIM11A-206ENST00000489469 MOB2Q70IA6 237 aa18.52■□□□□ 0.56
SMIM11A-206ENST00000489469 IFNL3Q8IZI9 196 aa18.52■□□□□ 0.56
SMIM11A-206ENST00000489469 WRNIP1Q96S55 665 aa18.52■□□□□ 0.56
SMIM11A-206ENST00000489469 SERPINB13Q9UIV8 391 aa18.52■□□□□ 0.56
SMIM11A-206ENST00000489469 ZNF112Q9UJU3 913 aa18.52■□□□□ 0.56
SMIM11A-206ENST00000489469 CCDC102AQ96A19 550 aa18.51■□□□□ 0.55
SMIM11A-206ENST00000489469 NAPBQ9H115 298 aa18.51■□□□□ 0.55
SMIM11A-206ENST00000489469 ZMYM6O95789 1325 aa18.5■□□□□ 0.55
SMIM11A-206ENST00000489469 USP17L12C9JPN9 530 aa18.5■□□□□ 0.55
SMIM11A-206ENST00000489469 USP17L21D6R901 530 aa18.5■□□□□ 0.55
SMIM11A-206ENST00000489469 ZNF157P51786 506 aaPredicted RBP18.5■□□□□ 0.55
SMIM11A-206ENST00000489469 ALX1Q15699 326 aa18.5■□□□□ 0.55
SMIM11A-206ENST00000489469 C12orf60Q5U649 245 aa18.5■□□□□ 0.55
SMIM11A-206ENST00000489469 PAXIP1Q6ZW49 1069 aaPredicted RBP18.5■□□□□ 0.55
SMIM11A-206ENST00000489469 ZNF589Q86UQ0 364 aaPredicted RBP18.5■□□□□ 0.55
SMIM11A-206ENST00000489469 EPB41L4AQ9HCS5 686 aaPredicted RBP18.5■□□□□ 0.55
SMIM11A-206ENST00000489469 SWAP70Q9UH65 585 aa18.5■□□□□ 0.55
SMIM11A-206ENST00000489469 FZD1Q9UP38 647 aa18.5■□□□□ 0.55
SMIM11A-206ENST00000489469 CTNND1O60716 968 aaKnown RBP18.49■□□□□ 0.55
SMIM11A-206ENST00000489469 CDC45O75419 566 aa18.49■□□□□ 0.55
SMIM11A-206ENST00000489469 HSPD1P10809 573 aaKnown RBP18.49■□□□□ 0.55
SMIM11A-206ENST00000489469 PLCD1P51178 756 aa18.49■□□□□ 0.55
SMIM11A-206ENST00000489469 HTRA3P83110 453 aa18.49■□□□□ 0.55
SMIM11A-206ENST00000489469 NOL9Q5SY16 702 aaKnown RBP18.49■□□□□ 0.55
SMIM11A-206ENST00000489469 CTR9Q6PD62 1173 aa18.49■□□□□ 0.55
SMIM11A-206ENST00000489469 SLC10A4Q96EP9 437 aa18.49■□□□□ 0.55
SMIM11A-206ENST00000489469 GINM1Q9NU53 330 aa18.49■□□□□ 0.55
SMIM11A-206ENST00000489469 PHF20L1A8MW92 1017 aa18.48■□□□□ 0.55
SMIM11A-206ENST00000489469 VGLL4Q14135 290 aa18.48■□□□□ 0.55
SMIM11A-206ENST00000489469 SLC4A8Q2Y0W8 1093 aa18.48■□□□□ 0.55
SMIM11A-206ENST00000489469 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.48■□□□□ 0.55
SMIM11A-206ENST00000489469 DSCC1Q9BVC3 393 aa18.48■□□□□ 0.55
SMIM11A-206ENST00000489469 LAMA4Q16363 1823 aa18.48■□□□□ 0.55
SMIM11A-206ENST00000489469 ROBO3Q96MS0 1386 aa18.47■□□□□ 0.55
SMIM11A-206ENST00000489469 SGSM2O43147 1006 aa18.47■□□□□ 0.55
SMIM11A-206ENST00000489469 SLC3A2P08195 630 aaKnown RBP18.47■□□□□ 0.55
SMIM11A-206ENST00000489469 SLC10A3P09131 477 aa18.47■□□□□ 0.55
SMIM11A-206ENST00000489469 INPP5BP32019 993 aa18.47■□□□□ 0.55
SMIM11A-206ENST00000489469 GABPAQ06546 454 aa18.47■□□□□ 0.55
SMIM11A-206ENST00000489469 TATDN1Q6P1N9 297 aa18.47■□□□□ 0.55
SMIM11A-206ENST00000489469 SCYL3Q8IZE3 742 aa18.47■□□□□ 0.55
SMIM11A-206ENST00000489469 CAPNS2Q96L46 248 aa18.47■□□□□ 0.55
SMIM11A-206ENST00000489469 DNAJC18Q9H819 358 aa18.47■□□□□ 0.55
SMIM11A-206ENST00000489469 ZNF287Q9HBT7 754 aa18.47■□□□□ 0.55
SMIM11A-206ENST00000489469 FAM196BA6NMK8 535 aa18.46■□□□□ 0.55
SMIM11A-206ENST00000489469 MINDY4BA8MYZ0 360 aa18.46■□□□□ 0.55
SMIM11A-206ENST00000489469 ZBTB48P10074 688 aaPredicted RBP18.46■□□□□ 0.55
SMIM11A-206ENST00000489469 CYP2D6P10635 497 aa18.46■□□□□ 0.55
SMIM11A-206ENST00000489469 NOGQ13253 232 aa18.46■□□□□ 0.55
SMIM11A-206ENST00000489469 VPS53Q5VIR6 699 aa18.46■□□□□ 0.55
SMIM11A-206ENST00000489469 CYP4F22Q6NT55 531 aa18.46■□□□□ 0.55
SMIM11A-206ENST00000489469 ERO1BQ86YB8 467 aa18.46■□□□□ 0.55
SMIM11A-206ENST00000489469 RASAL3Q86YV0 1011 aa18.46■□□□□ 0.55
SMIM11A-206ENST00000489469 ZKSCAN4Q969J2 545 aaPredicted RBP18.46■□□□□ 0.55
SMIM11A-206ENST00000489469 CLMNQ96JQ2 1002 aa18.46■□□□□ 0.55
SMIM11A-206ENST00000489469 ELP3Q9H9T3 547 aa18.46■□□□□ 0.55
SMIM11A-206ENST00000489469 PICK1Q9NRD5 415 aa18.46■□□□□ 0.55
SMIM11A-206ENST00000489469 GTF3C3Q9Y5Q9 886 aa18.46■□□□□ 0.55
SMIM11A-206ENST00000489469 SNCAIPQ9Y6H5 919 aa18.46■□□□□ 0.55
SMIM11A-206ENST00000489469 WDR33Q9C0J8 1336 aaKnown RBP18.46■□□□□ 0.55
SMIM11A-206ENST00000489469 THSD7BQ9C0I4 1608 aa18.45■□□□□ 0.54
SMIM11A-206ENST00000489469 PHIPQ8WWQ0 1821 aa18.45■□□□□ 0.54
SMIM11A-206ENST00000489469 SPDYE5A6NIY4 337 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms