RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 NOL9Q5SY16 702 aaKnown RBP11.7□□□□□ -0.54
SSBP1-212ENST00000489378 TSPYL6Q8N831 410 aa11.7□□□□□ -0.54
SSBP1-212ENST00000489378 ZDHHC15Q96MV8 337 aa11.7□□□□□ -0.54
SSBP1-212ENST00000489378 IFT57Q9NWB7 429 aa11.7□□□□□ -0.54
SSBP1-212ENST00000489378 IQSEC3Q9UPP2 1182 aaPredicted RBP11.7□□□□□ -0.54
SSBP1-212ENST00000489378 CHMP3Q9Y3E7 222 aa11.7□□□□□ -0.54
SSBP1-212ENST00000489378 AK9Q5TCS8 1911 aa11.7□□□□□ -0.54
SSBP1-212ENST00000489378 HMGCRP04035 888 aa11.69□□□□□ -0.54
SSBP1-212ENST00000489378 CHAF1AQ13111 956 aaPredicted RBP11.69□□□□□ -0.54
SSBP1-212ENST00000489378 ZNF697Q5TEC3 545 aa11.69□□□□□ -0.54
SSBP1-212ENST00000489378 COA7Q96BR5 231 aa11.69□□□□□ -0.54
SSBP1-212ENST00000489378 OGDHLQ9ULD0 1010 aa11.69□□□□□ -0.54
SSBP1-212ENST00000489378 A0A0G2JLL6 359 aaPredicted RBP11.69□□□□□ -0.54
SSBP1-212ENST00000489378 GNAI1P63096 354 aa11.69□□□□□ -0.54
SSBP1-212ENST00000489378 LRRC26Q2I0M4 334 aa11.69□□□□□ -0.54
SSBP1-212ENST00000489378 LDHAL6AQ6ZMR3 332 aa11.69□□□□□ -0.54
SSBP1-212ENST00000489378 GADL1Q6ZQY3 521 aa11.69□□□□□ -0.54
SSBP1-212ENST00000489378 PRRT2Q7Z6L0 340 aaPredicted RBP11.69□□□□□ -0.54
SSBP1-212ENST00000489378 ANKRD13CQ8N6S4 541 aa11.69□□□□□ -0.54
SSBP1-212ENST00000489378 SMCR8Q8TEV9 937 aaPredicted RBP11.69□□□□□ -0.54
SSBP1-212ENST00000489378 HMX1Q9NP08 348 aaPredicted RBP11.69□□□□□ -0.54
SSBP1-212ENST00000489378 CNNM1Q9NRU3 951 aa11.69□□□□□ -0.54
SSBP1-212ENST00000489378 PTPRFP10586 1907 aa11.68□□□□□ -0.54
SSBP1-212ENST00000489378 ARHGAP33O14559 1287 aa11.68□□□□□ -0.54
SSBP1-212ENST00000489378 COL6A1P12109 1028 aa11.68□□□□□ -0.54
SSBP1-212ENST00000489378 PLA2G5P39877 138 aa11.68□□□□□ -0.54
SSBP1-212ENST00000489378 TCP10Q12799 353 aa11.68□□□□□ -0.54
SSBP1-212ENST00000489378 FASTKD5Q7L8L6 764 aaKnown RBP11.68□□□□□ -0.54
SSBP1-212ENST00000489378 FAM151AQ8WW52 585 aa11.68□□□□□ -0.54
SSBP1-212ENST00000489378 MYLIPQ8WY64 445 aa11.68□□□□□ -0.54
SSBP1-212ENST00000489378 SYMPKQ92797 1274 aaKnown RBP11.68□□□□□ -0.54
SSBP1-212ENST00000489378 SEMA6BQ9H3T3 888 aa11.68□□□□□ -0.54
SSBP1-212ENST00000489378 ZHX2Q9Y6X8 837 aa11.68□□□□□ -0.54
SSBP1-212ENST00000489378 NCOR1O75376 2440 aa11.68□□□□□ -0.54
SSBP1-212ENST00000489378 DNAH12Q6ZR08 3092 aa11.67□□□□□ -0.54
SSBP1-212ENST00000489378 UBE4AQ14139 1066 aa11.67□□□□□ -0.54
SSBP1-212ENST00000489378 EPHA10Q5JZY3 1008 aa11.67□□□□□ -0.54
SSBP1-212ENST00000489378 LMBR1LQ6UX01 489 aa11.67□□□□□ -0.54
SSBP1-212ENST00000489378 MRIQ9BWK5 157 aa11.67□□□□□ -0.54
SSBP1-212ENST00000489378 MYH16Q9H6N6 1097 aa11.67□□□□□ -0.54
SSBP1-212ENST00000489378 GJD2Q9UKL4 321 aa11.67□□□□□ -0.54
SSBP1-212ENST00000489378 SLC45A1Q9Y2W3 748 aa11.67□□□□□ -0.54
SSBP1-212ENST00000489378 TNFRSF10AO00220 468 aa11.66□□□□□ -0.54
SSBP1-212ENST00000489378 NFIAQ12857 509 aa11.66□□□□□ -0.54
SSBP1-212ENST00000489378 TAF7LQ5H9L4 462 aa11.66□□□□□ -0.54
SSBP1-212ENST00000489378 FBXO33Q7Z6M2 555 aa11.66□□□□□ -0.54
SSBP1-212ENST00000489378 LINS1Q8NG48 757 aa11.66□□□□□ -0.54
SSBP1-212ENST00000489378 TBC1D22AQ8WUA7 517 aa11.66□□□□□ -0.54
SSBP1-212ENST00000489378 TRIB2Q92519 343 aa11.66□□□□□ -0.54
SSBP1-212ENST00000489378 STK31Q9BXU1 1019 aa11.66□□□□□ -0.54
SSBP1-212ENST00000489378 AFG3L2Q9Y4W6 797 aa11.66□□□□□ -0.54
SSBP1-212ENST00000489378 PLXNB2O15031 1838 aa11.65□□□□□ -0.54
SSBP1-212ENST00000489378 PHF20L1A8MW92 1017 aa11.65□□□□□ -0.54
SSBP1-212ENST00000489378 PTPRAP18433 802 aa11.65□□□□□ -0.54
SSBP1-212ENST00000489378 CCDC57Q2TAC2 916 aa11.65□□□□□ -0.54
SSBP1-212ENST00000489378 SCYL3Q8IZE3 742 aa11.65□□□□□ -0.54
SSBP1-212ENST00000489378 OXER1Q8TDS5 423 aa11.65□□□□□ -0.54
SSBP1-212ENST00000489378 FAM122AQ96E09 287 aa11.65□□□□□ -0.54
SSBP1-212ENST00000489378 CHMP4AQ9BY43 222 aa11.65□□□□□ -0.54
SSBP1-212ENST00000489378 PUS3Q9BZE2 481 aaKnown RBP11.65□□□□□ -0.54
SSBP1-212ENST00000489378 TTYH1Q9H313 450 aaPredicted RBP11.65□□□□□ -0.54
SSBP1-212ENST00000489378 ADAMTS8Q9UP79 889 aa11.65□□□□□ -0.54
SSBP1-212ENST00000489378 PHIPQ8WWQ0 1821 aa11.65□□□□□ -0.55
SSBP1-212ENST00000489378 FAM110CQ1W6H9 321 aa11.64□□□□□ -0.55
SSBP1-212ENST00000489378 TREML2Q5T2D2 321 aa11.64□□□□□ -0.55
SSBP1-212ENST00000489378 MAP3K21Q5TCX8 1036 aa11.64□□□□□ -0.55
SSBP1-212ENST00000489378 DMRTA1Q5VZB9 504 aa11.64□□□□□ -0.55
SSBP1-212ENST00000489378 CDC42EP5Q6NZY7 148 aa11.64□□□□□ -0.55
SSBP1-212ENST00000489378 ADGRD1Q6QNK2 874 aa11.64□□□□□ -0.55
SSBP1-212ENST00000489378 HHIPL2Q6UWX4 724 aa11.64□□□□□ -0.55
SSBP1-212ENST00000489378 VPS37DQ86XT2 251 aa11.64□□□□□ -0.55
SSBP1-212ENST00000489378 ZFPM1Q8IX07 1006 aa11.64□□□□□ -0.55
SSBP1-212ENST00000489378 DNAAF4Q8WXU2 420 aa11.64□□□□□ -0.55
SSBP1-212ENST00000489378 LBHD1Q9BQE6 289 aaPredicted RBP11.64□□□□□ -0.55
SSBP1-212ENST00000489378 PICK1Q9NRD5 415 aa11.64□□□□□ -0.55
SSBP1-212ENST00000489378 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.64□□□□□ -0.55
SSBP1-212ENST00000489378 FAM198AQ9UFP1 575 aa11.64□□□□□ -0.55
SSBP1-212ENST00000489378 ATRNL1Q5VV63 1379 aa11.64□□□□□ -0.55
SSBP1-212ENST00000489378 FRAT2O75474 233 aaPredicted RBP11.63□□□□□ -0.55
SSBP1-212ENST00000489378 SLURP2P0DP57 97 aa11.63□□□□□ -0.55
SSBP1-212ENST00000489378 FOSL2P15408 326 aa11.63□□□□□ -0.55
SSBP1-212ENST00000489378 FLIIQ13045 1269 aa11.63□□□□□ -0.55
SSBP1-212ENST00000489378 WDR43Q15061 677 aaKnown RBP eCLIP11.63□□□□□ -0.55
SSBP1-212ENST00000489378 TJAP1Q5JTD0 557 aa11.63□□□□□ -0.55
SSBP1-212ENST00000489378 CCDC84Q86UT8 332 aaPredicted RBP11.63□□□□□ -0.55
SSBP1-212ENST00000489378 USP38Q8NB14 1042 aa11.63□□□□□ -0.55
SSBP1-212ENST00000489378 AGTPBP1Q9UPW5 1226 aa11.63□□□□□ -0.55
SSBP1-212ENST00000489378 MAST3O60307 1309 aa11.62□□□□□ -0.55
SSBP1-212ENST00000489378 TMEM265A0A087WTH1 108 aa11.62□□□□□ -0.55
SSBP1-212ENST00000489378 TRIM75PA6NK02 468 aa11.62□□□□□ -0.55
SSBP1-212ENST00000489378 PSEN2P49810 448 aa11.62□□□□□ -0.55
SSBP1-212ENST00000489378 SHHQ15465 462 aa11.62□□□□□ -0.55
SSBP1-212ENST00000489378 C9orf50Q5SZB4 431 aa11.62□□□□□ -0.55
SSBP1-212ENST00000489378 TSR2Q969E8 191 aaKnown RBP11.62□□□□□ -0.55
SSBP1-212ENST00000489378 DAGLAQ9Y4D2 1042 aa11.62□□□□□ -0.55
SSBP1-212ENST00000489378 MAST2Q6P0Q8 1798 aa11.62□□□□□ -0.55
SSBP1-212ENST00000489378 BDP1A6H8Y1 2624 aa11.62□□□□□ -0.55
SSBP1-212ENST00000489378 LTBP2Q14767 1821 aa11.61□□□□□ -0.55
SSBP1-212ENST00000489378 DOCK2Q92608 1830 aa11.61□□□□□ -0.55
SSBP1-212ENST00000489378 HRO43593 1189 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms