RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-231	ENST00000489261	SUGT1	Q9Y2Z0	365 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	ATP6V0A2	Q9Y487	856 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	DUOX1	Q9NRD9	1551 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	TAF1	P21675	1872 aa		12.62	□□□□□ -0.39
ITSN1-231	ENST00000489261	SYCE3	A1L190	88 aa		12.62	□□□□□ -0.39
ITSN1-231	ENST00000489261		H0YIN7	160 aa		12.62	□□□□□ -0.39
ITSN1-231	ENST00000489261	UFL1	O94874	794 aa		12.62	□□□□□ -0.39
ITSN1-231	ENST00000489261	IFNAR1	P17181	557 aa		12.62	□□□□□ -0.39
ITSN1-231	ENST00000489261	PDE4B	Q07343	736 aa		12.62	□□□□□ -0.39
ITSN1-231	ENST00000489261	CCDC173	Q0VFZ6	552 aa		12.62	□□□□□ -0.39
ITSN1-231	ENST00000489261	RRP12	Q5JTH9	1297 aa	Known RBP	12.62	□□□□□ -0.39
ITSN1-231	ENST00000489261	CTR9	Q6PD62	1173 aa		12.62	□□□□□ -0.39
ITSN1-231	ENST00000489261	ARHGAP27	Q6ZUM4	889 aa		12.62	□□□□□ -0.39
ITSN1-231	ENST00000489261	TXNRD3	Q86VQ6	643 aa		12.62	□□□□□ -0.39
ITSN1-231	ENST00000489261	ZNF384	Q8TF68	577 aa		12.62	□□□□□ -0.39
ITSN1-231	ENST00000489261	SDR42E1	Q8WUS8	393 aa		12.62	□□□□□ -0.39
ITSN1-231	ENST00000489261	FAM163A	Q96GL9	167 aa	Predicted RBP	12.62	□□□□□ -0.39
ITSN1-231	ENST00000489261	DCP1A	Q9NPI6	582 aa	Predicted RBP	12.62	□□□□□ -0.39
ITSN1-231	ENST00000489261	DDX19A	Q9NUU7	478 aa	Known RBP	12.62	□□□□□ -0.39
ITSN1-231	ENST00000489261	PPEF1	O14829	653 aa	Predicted RBP	12.61	□□□□□ -0.39
ITSN1-231	ENST00000489261	FMNL1	O95466	1100 aa	Predicted RBP	12.61	□□□□□ -0.39
ITSN1-231	ENST00000489261	ADD1	P35611	737 aa	Known RBP	12.61	□□□□□ -0.39
ITSN1-231	ENST00000489261	TRIM29	Q14134	588 aa		12.61	□□□□□ -0.39
ITSN1-231	ENST00000489261	NTRK3	Q16288	839 aa		12.61	□□□□□ -0.39
ITSN1-231	ENST00000489261	TRIM22	Q8IYM9	498 aa		12.61	□□□□□ -0.39
ITSN1-231	ENST00000489261	TTLL6	Q8N841	843 aa		12.61	□□□□□ -0.39
ITSN1-231	ENST00000489261	TBC1D16	Q8TBP0	767 aa		12.61	□□□□□ -0.39
ITSN1-231	ENST00000489261	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	12.61	□□□□□ -0.39
ITSN1-231	ENST00000489261	COA1	Q9GZY4	146 aa		12.61	□□□□□ -0.39
ITSN1-231	ENST00000489261	RBM28	Q9NW13	759 aa	Known RBP	12.61	□□□□□ -0.39
ITSN1-231	ENST00000489261	RTEL1	Q9NZ71	1219 aa		12.61	□□□□□ -0.39
ITSN1-231	ENST00000489261	TFIP11	Q9UBB9	837 aa	Known RBP	12.61	□□□□□ -0.39
ITSN1-231	ENST00000489261	FAM205A	Q6ZU69	1335 aa		12.61	□□□□□ -0.39
ITSN1-231	ENST00000489261	USP17L12	C9JPN9	530 aa		12.6	□□□□□ -0.39
ITSN1-231	ENST00000489261	USP17L21	D6R901	530 aa		12.6	□□□□□ -0.39
ITSN1-231	ENST00000489261	YEATS4	O95619	227 aa		12.6	□□□□□ -0.39
ITSN1-231	ENST00000489261	SRGN	P10124	158 aa		12.6	□□□□□ -0.39
ITSN1-231	ENST00000489261	PRDX5	P30044	214 aa		12.6	□□□□□ -0.39
ITSN1-231	ENST00000489261	SEC23A	Q15436	765 aa		12.6	□□□□□ -0.39
ITSN1-231	ENST00000489261	RTN1	Q16799	776 aa		12.6	□□□□□ -0.39
ITSN1-231	ENST00000489261	FANCB	Q8NB91	859 aa		12.6	□□□□□ -0.39
ITSN1-231	ENST00000489261	MASTL	Q96GX5	879 aa		12.6	□□□□□ -0.39
ITSN1-231	ENST00000489261	PPP1R9B	Q96SB3	815 aa		12.6	□□□□□ -0.39
ITSN1-231	ENST00000489261	ALG1	Q9BT22	464 aa		12.6	□□□□□ -0.39
ITSN1-231	ENST00000489261	ZNF287	Q9HBT7	754 aa		12.6	□□□□□ -0.39
ITSN1-231	ENST00000489261	FAM217B	Q9NTX9	383 aa	Predicted RBP	12.6	□□□□□ -0.39
ITSN1-231	ENST00000489261	AATF	Q9NY61	560 aa	Known RBP eCLIP	12.6	□□□□□ -0.39
ITSN1-231	ENST00000489261	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	12.6	□□□□□ -0.39
ITSN1-231	ENST00000489261	TACC3	Q9Y6A5	838 aa		12.6	□□□□□ -0.39
ITSN1-231	ENST00000489261	MAST2	Q6P0Q8	1798 aa		12.59	□□□□□ -0.39
ITSN1-231	ENST00000489261	GPR75-ASB3	A0A0A6YYF3	556 aa		12.59	□□□□□ -0.39
ITSN1-231	ENST00000489261	CTAGE5	O15320	804 aa		12.59	□□□□□ -0.39
ITSN1-231	ENST00000489261	CDC27	P30260	824 aa		12.59	□□□□□ -0.39
ITSN1-231	ENST00000489261	STYK1	Q6J9G0	422 aa		12.59	□□□□□ -0.39
ITSN1-231	ENST00000489261	FAM173B	Q6P4H8	233 aa		12.59	□□□□□ -0.39
ITSN1-231	ENST00000489261	CATIP	Q7Z7H3	387 aa		12.59	□□□□□ -0.39
ITSN1-231	ENST00000489261	MICU3	Q86XE3	530 aa		12.59	□□□□□ -0.39
ITSN1-231	ENST00000489261	ZNF654	Q8IZM8	581 aa		12.59	□□□□□ -0.39
ITSN1-231	ENST00000489261	KCNG4	Q8TDN1	519 aa		12.59	□□□□□ -0.39
ITSN1-231	ENST00000489261	EYA3	Q99504	573 aa		12.59	□□□□□ -0.39
ITSN1-231	ENST00000489261	RBSN	Q9H1K0	784 aa		12.59	□□□□□ -0.39
ITSN1-231	ENST00000489261	INCENP	Q9NQS7	918 aa		12.59	□□□□□ -0.39
ITSN1-231	ENST00000489261	POLR3E	Q9NVU0	708 aa		12.59	□□□□□ -0.39
ITSN1-231	ENST00000489261	MROH7-TTC4	A0A0A0MT08	1334 aa		12.59	□□□□□ -0.39
ITSN1-231	ENST00000489261	TCHH	Q07283	1943 aa		12.58	□□□□□ -0.39
ITSN1-231	ENST00000489261		A0A1W2PQ27	194 aa		12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261		A0A1W2PQ64	194 aa		12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261		A0A1W2PQD8	194 aa		12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261	C6orf229	H3BNL8	230 aa		12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261	DDAH1	O94760	285 aa		12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261	DEXI	O95424	95 aa		12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261	XBP1	P17861	261 aa		12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261	USP5	P45974	858 aa		12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261	SAFB	Q15424	915 aa	Known RBP eCLIP	12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261	IFIT1B	Q5T764	474 aa	Known RBP	12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261	C12orf60	Q5U649	245 aa		12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261	MPND	Q8N594	471 aa		12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261	ANKS1A	Q92625	1134 aa		12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261	MAP3K14	Q99558	947 aa		12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261	NUP62CL	Q9H1M0	184 aa		12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261	POLL	Q9UGP5	575 aa		12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261	MKRN1	Q9UHC7	482 aa	Known RBP	12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261	TNKS	O95271	1327 aa		12.58	□□□□□ -0.4
ITSN1-231	ENST00000489261	MYH13	Q9UKX3	1938 aa		12.57	□□□□□ -0.4
ITSN1-231	ENST00000489261	RANBP6	O60518	1105 aa	Known RBP	12.57	□□□□□ -0.4
ITSN1-231	ENST00000489261	DTNB	O60941	627 aa		12.57	□□□□□ -0.4
ITSN1-231	ENST00000489261	CAVIN2	O95810	425 aa		12.57	□□□□□ -0.4
ITSN1-231	ENST00000489261	CCDC192	P0DO97	292 aa		12.57	□□□□□ -0.4
ITSN1-231	ENST00000489261	AKAP17A	Q02040	695 aa	Known RBP	12.57	□□□□□ -0.4
ITSN1-231	ENST00000489261	KIF23	Q02241	960 aa	Predicted RBP	12.57	□□□□□ -0.4
ITSN1-231	ENST00000489261	RASSF7	Q02833	373 aa		12.57	□□□□□ -0.4
ITSN1-231	ENST00000489261	MAP3K11	Q16584	847 aa		12.57	□□□□□ -0.4
ITSN1-231	ENST00000489261	C9orf131	Q5VYM1	1079 aa		12.57	□□□□□ -0.4
ITSN1-231	ENST00000489261	KRT40	Q6A162	431 aa		12.57	□□□□□ -0.4
ITSN1-231	ENST00000489261	ADAL	Q6DHV7	355 aa		12.57	□□□□□ -0.4
ITSN1-231	ENST00000489261	DGKH	Q86XP1	1220 aa		12.57	□□□□□ -0.4
ITSN1-231	ENST00000489261	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	12.57	□□□□□ -0.4
ITSN1-231	ENST00000489261	JMY	Q8N9B5	988 aa		12.57	□□□□□ -0.4
ITSN1-231	ENST00000489261	BICD2	Q8TD16	824 aa		12.57	□□□□□ -0.4
ITSN1-231	ENST00000489261	CNKSR1	Q969H4	720 aa		12.57	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms