RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 DUSP27Q5VZP5 1158 aa4.51□□□□□ -1.69
CALD1-221ENST00000489019 NFXL1Q6ZNB6 911 aa4.51□□□□□ -1.69
CALD1-221ENST00000489019 GIPC2Q8TF65 315 aa4.51□□□□□ -1.69
CALD1-221ENST00000489019 ELMO3Q96BJ8 720 aa4.51□□□□□ -1.69
CALD1-221ENST00000489019 NOC4LQ9BVI4 516 aaKnown RBP4.51□□□□□ -1.69
CALD1-221ENST00000489019 SSU72Q9NP77 194 aaKnown RBP4.51□□□□□ -1.69
CALD1-221ENST00000489019 VTI1BQ9UEU0 232 aa4.51□□□□□ -1.69
CALD1-221ENST00000489019 BAZ1AQ9NRL2 1556 aaPredicted RBP4.51□□□□□ -1.69
CALD1-221ENST00000489019 WIZO95785 1651 aa4.51□□□□□ -1.69
CALD1-221ENST00000489019 UNC13AQ9UPW8 1703 aa4.5□□□□□ -1.69
CALD1-221ENST00000489019 GFRA2O00451 464 aa4.5□□□□□ -1.69
CALD1-221ENST00000489019 GP2P55259 537 aaKnown RBP4.5□□□□□ -1.69
CALD1-221ENST00000489019 TRIM26Q12899 539 aaPredicted RBP4.5□□□□□ -1.69
CALD1-221ENST00000489019 WIPI1Q5MNZ9 446 aaPredicted RBP4.5□□□□□ -1.69
CALD1-221ENST00000489019 TMCO4Q5TGY1 634 aa4.5□□□□□ -1.69
CALD1-221ENST00000489019 PHC3Q8NDX5 983 aa4.5□□□□□ -1.69
CALD1-221ENST00000489019 FBRSQ9HAH7 460 aa4.5□□□□□ -1.69
CALD1-221ENST00000489019 MRS2Q9HD23 443 aa4.5□□□□□ -1.69
CALD1-221ENST00000489019 PICK1Q9NRD5 415 aa4.5□□□□□ -1.69
CALD1-221ENST00000489019 CCDC39Q9UFE4 941 aa4.5□□□□□ -1.69
CALD1-221ENST00000489019 RBAK-RBAKDNI3L0D1 243 aa4.49□□□□□ -1.69
CALD1-221ENST00000489019 PRNPP04156 253 aa4.49□□□□□ -1.69
CALD1-221ENST00000489019 MRPL58Q14197 206 aaKnown RBP4.49□□□□□ -1.69
CALD1-221ENST00000489019 SLBPQ14493 270 aaKnown RBP eCLIP4.49□□□□□ -1.69
CALD1-221ENST00000489019 NKG7Q16617 165 aa4.49□□□□□ -1.69
CALD1-221ENST00000489019 CYP27C1Q4G0S4 372 aa4.49□□□□□ -1.69
CALD1-221ENST00000489019 HDXQ7Z353 690 aa4.49□□□□□ -1.69
CALD1-221ENST00000489019 TOP6BLQ8N6T0 577 aa4.49□□□□□ -1.69
CALD1-221ENST00000489019 FAM181AQ8N9Y4 354 aa4.49□□□□□ -1.69
CALD1-221ENST00000489019 MIR1-1HGQ9H1L0 117 aa4.49□□□□□ -1.69
CALD1-221ENST00000489019 SNCAIPQ9Y6H5 919 aa4.49□□□□□ -1.69
CALD1-221ENST00000489019 OAS3Q9Y6K5 1087 aaKnown RBP4.49□□□□□ -1.69
CALD1-221ENST00000489019 WNT11O96014 354 aa4.48□□□□□ -1.69
CALD1-221ENST00000489019 RLBP1P12271 317 aa4.48□□□□□ -1.69
CALD1-221ENST00000489019 MFAP1P55081 439 aaKnown RBP4.48□□□□□ -1.69
CALD1-221ENST00000489019 ARMCX6Q7L4S7 300 aa4.48□□□□□ -1.69
CALD1-221ENST00000489019 FAM214BQ7L5A3 538 aa4.48□□□□□ -1.69
CALD1-221ENST00000489019 WFDC3Q8IUB2 231 aa4.48□□□□□ -1.69
CALD1-221ENST00000489019 PLD6Q8N2A8 252 aaKnown RBP4.48□□□□□ -1.69
CALD1-221ENST00000489019 ZNF507Q8TCN5 953 aa4.48□□□□□ -1.69
CALD1-221ENST00000489019 JARID2Q92833 1246 aaPredicted RBP4.48□□□□□ -1.69
CALD1-221ENST00000489019 RHOVQ96L33 236 aa4.48□□□□□ -1.69
CALD1-221ENST00000489019 HEXIM2Q96MH2 286 aaKnown RBP4.48□□□□□ -1.69
CALD1-221ENST00000489019 WNT10AQ9GZT5 417 aa4.48□□□□□ -1.69
CALD1-221ENST00000489019 PF4P02776 101 aa4.47□□□□□ -1.69
CALD1-221ENST00000489019 ZNF16P17020 682 aaPredicted RBP4.47□□□□□ -1.69
CALD1-221ENST00000489019 LMNB1P20700 586 aa4.47□□□□□ -1.69
CALD1-221ENST00000489019 GRK4P32298 578 aa4.47□□□□□ -1.69
CALD1-221ENST00000489019 OXCT1P55809 520 aa4.47□□□□□ -1.69
CALD1-221ENST00000489019 CAMK2GQ13555 558 aaPredicted RBP4.47□□□□□ -1.69
CALD1-221ENST00000489019 ZNF326Q5BKZ1 582 aaKnown RBP4.47□□□□□ -1.69
CALD1-221ENST00000489019 LDLRAD1Q5T700 205 aa4.47□□□□□ -1.69
CALD1-221ENST00000489019 BNC2Q6ZN30 1099 aaPredicted RBP4.47□□□□□ -1.69
CALD1-221ENST00000489019 CDC37L1Q7L3B6 337 aa4.47□□□□□ -1.69
CALD1-221ENST00000489019 PRDM10Q9NQV6 1147 aa4.47□□□□□ -1.69
CALD1-221ENST00000489019 BSDC1Q9NW68 430 aaPredicted RBP4.47□□□□□ -1.69
CALD1-221ENST00000489019 CNTNAP4Q9C0A0 1308 aa4.46□□□□□ -1.69
CALD1-221ENST00000489019 SMARCA4P51532 1647 aa4.46□□□□□ -1.69
CALD1-221ENST00000489019 FAM221AA4D161 298 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 LRIG2O94898 1065 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 SLITRK5O94991 958 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 EOMESO95936 686 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 F13A1P00488 732 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 CAP2P40123 477 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 ETF1P62495 437 aaKnown RBP4.46□□□□□ -1.7
CALD1-221ENST00000489019 RPL6Q02878 288 aaKnown RBP4.46□□□□□ -1.7
CALD1-221ENST00000489019 LMNB2Q03252 620 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 TSNAXIP1Q2TAA8 658 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 ZNF574Q6ZN55 896 aaPredicted RBP4.46□□□□□ -1.7
CALD1-221ENST00000489019 ERMP1Q7Z2K6 904 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 VSIG10LQ86VR7 867 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 KCT2Q8NC54 265 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 RIN3Q8TB24 985 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 TMEM74Q96NL1 305 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 RSRP1Q9BUV0 290 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 COPRSQ9NQ92 184 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 ANGEL1Q9UNK9 670 aaKnown RBP4.46□□□□□ -1.7
CALD1-221ENST00000489019 PLAGL2Q9UPG8 496 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 CORINQ9Y5Q5 1042 aa4.46□□□□□ -1.7
CALD1-221ENST00000489019 LOC105371045A0A1W2PR82 267 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 MINDY4BA8MYZ0 360 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 CILPO75339 1184 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 CEACAM5P06731 702 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 GARTP22102 1010 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 GBP2P32456 591 aaPredicted RBP4.45□□□□□ -1.7
CALD1-221ENST00000489019 CD96P40200 585 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 FAM160A1Q05DH4 1040 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 BNIP3Q12983 259 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 PRAMEF13Q5VWM6 474 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 SPRED2Q7Z698 418 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 CCDC84Q86UT8 332 aaPredicted RBP4.45□□□□□ -1.7
CALD1-221ENST00000489019 HID1Q8IV36 788 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 ABI1Q8IZP0 508 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 FAM9AQ8IZU1 332 aaPredicted RBP4.45□□□□□ -1.7
CALD1-221ENST00000489019 NETO1Q8TDF5 533 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 BCL7CQ8WUZ0 217 aaPredicted RBP4.45□□□□□ -1.7
CALD1-221ENST00000489019 GATAD2BQ8WXI9 593 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 DPH2Q9BQC3 489 aaPredicted RBP4.45□□□□□ -1.7
CALD1-221ENST00000489019 FOXQ1Q9C009 403 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 MKNK2Q9HBH9 465 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms