RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 CASTP20810 708 aaKnown RBP18.97■□□□□ 0.63
CLDN11-208ENST00000488989 TNNI2P48788 182 aa18.97■□□□□ 0.63
CLDN11-208ENST00000488989 TCP10Q12799 353 aa18.97■□□□□ 0.63
CLDN11-208ENST00000488989 TNFAIP1Q13829 316 aa18.97■□□□□ 0.63
CLDN11-208ENST00000488989 BLOC1S2Q6QNY1 142 aa18.97■□□□□ 0.63
CLDN11-208ENST00000488989 MFSD6Q6ZSS7 791 aa18.97■□□□□ 0.63
CLDN11-208ENST00000488989 C16orf86Q6ZW13 317 aa18.97■□□□□ 0.63
CLDN11-208ENST00000488989 USP50Q70EL3 339 aaPredicted RBP18.97■□□□□ 0.63
CLDN11-208ENST00000488989 RUFY3Q7L099 469 aa18.97■□□□□ 0.63
CLDN11-208ENST00000488989 MB21D2Q8IYB1 491 aaPredicted RBP18.97■□□□□ 0.63
CLDN11-208ENST00000488989 VEZTQ9HBM0 779 aa18.97■□□□□ 0.63
CLDN11-208ENST00000488989 ASTN2O75129 1339 aaPredicted RBP18.97■□□□□ 0.63
CLDN11-208ENST00000488989 NEDD4P46934 1319 aa18.97■□□□□ 0.63
CLDN11-208ENST00000488989 RPS6KB1P23443 525 aa18.96■□□□□ 0.63
CLDN11-208ENST00000488989 EPHX2P34913 555 aa18.96■□□□□ 0.63
CLDN11-208ENST00000488989 EXOSC10Q01780 885 aaKnown RBP18.96■□□□□ 0.63
CLDN11-208ENST00000488989 PDE4BQ07343 736 aa18.96■□□□□ 0.63
CLDN11-208ENST00000488989 TRDNQ13061 729 aa18.96■□□□□ 0.63
CLDN11-208ENST00000488989 COL9A3Q14050 684 aaPredicted RBP18.96■□□□□ 0.63
CLDN11-208ENST00000488989 DHX32Q7L7V1 743 aaKnown RBP18.96■□□□□ 0.63
CLDN11-208ENST00000488989 APOBEC3FQ8IUX4 373 aaKnown RBP18.96■□□□□ 0.63
CLDN11-208ENST00000488989 TTC14Q96N46 770 aa18.96■□□□□ 0.63
CLDN11-208ENST00000488989 KRT23Q9C075 422 aa18.96■□□□□ 0.63
CLDN11-208ENST00000488989 ALDH8A1Q9H2A2 487 aaPredicted RBP18.96■□□□□ 0.63
CLDN11-208ENST00000488989 PI4KBQ9UBF8 816 aa18.96■□□□□ 0.63
CLDN11-208ENST00000488989 CYP46A1Q9Y6A2 500 aa18.96■□□□□ 0.63
CLDN11-208ENST00000488989 WDR19Q8NEZ3 1342 aa18.96■□□□□ 0.63
CLDN11-208ENST00000488989 RALYLQ86SE5 291 aaKnown RBP18.95■□□□□ 0.62
CLDN11-208ENST00000488989 FOXP4Q8IVH2 680 aaPredicted RBP18.95■□□□□ 0.62
CLDN11-208ENST00000488989 UPF3BQ9BZI7 483 aaKnown RBP18.95■□□□□ 0.62
CLDN11-208ENST00000488989 TAF1DQ9H5J8 278 aaPredicted RBP18.95■□□□□ 0.62
CLDN11-208ENST00000488989 INCENPQ9NQS7 918 aa18.95■□□□□ 0.62
CLDN11-208ENST00000488989 SWAP70Q9UH65 585 aa18.95■□□□□ 0.62
CLDN11-208ENST00000488989 GREB1LQ9C091 1923 aaPredicted RBP18.94■□□□□ 0.62
CLDN11-208ENST00000488989 NEK4P51957 841 aa18.94■□□□□ 0.62
CLDN11-208ENST00000488989 ANGEL2Q5VTE6 544 aaKnown RBP18.94■□□□□ 0.62
CLDN11-208ENST00000488989 FBXL16Q8N461 479 aa18.94■□□□□ 0.62
CLDN11-208ENST00000488989 NKX2-3Q8TAU0 364 aa18.94■□□□□ 0.62
CLDN11-208ENST00000488989 ZC3H15Q8WU90 426 aaKnown RBP18.94■□□□□ 0.62
CLDN11-208ENST00000488989 SNX21Q969T3 373 aa18.94■□□□□ 0.62
CLDN11-208ENST00000488989 DYNLL2Q96FJ2 89 aa18.94■□□□□ 0.62
CLDN11-208ENST00000488989 MTA3Q9BTC8 594 aa18.94■□□□□ 0.62
CLDN11-208ENST00000488989 ZNF287Q9HBT7 754 aa18.94■□□□□ 0.62
CLDN11-208ENST00000488989 SERPINB13Q9UIV8 391 aa18.94■□□□□ 0.62
CLDN11-208ENST00000488989 B4E1Z4 1266 aa18.93■□□□□ 0.62
CLDN11-208ENST00000488989 CPA1P15085 419 aa18.93■□□□□ 0.62
CLDN11-208ENST00000488989 MCM5P33992 734 aa18.93■□□□□ 0.62
CLDN11-208ENST00000488989 CDK8P49336 464 aa18.93■□□□□ 0.62
CLDN11-208ENST00000488989 RASA3Q14644 834 aa18.93■□□□□ 0.62
CLDN11-208ENST00000488989 SLC4A8Q2Y0W8 1093 aa18.93■□□□□ 0.62
CLDN11-208ENST00000488989 TEPSINQ96N21 525 aa18.93■□□□□ 0.62
CLDN11-208ENST00000488989 AGXT2Q9BYV1 514 aa18.93■□□□□ 0.62
CLDN11-208ENST00000488989 TMEM39BQ9GZU3 492 aa18.93■□□□□ 0.62
CLDN11-208ENST00000488989 GGA3Q9NZ52 723 aa18.93■□□□□ 0.62
CLDN11-208ENST00000488989 PPP2R3BQ9Y5P8 575 aa18.93■□□□□ 0.62
CLDN11-208ENST00000488989 ST18O60284 1047 aa18.92■□□□□ 0.62
CLDN11-208ENST00000488989 TBC1D12O60347 775 aa18.92■□□□□ 0.62
CLDN11-208ENST00000488989 ANTXR2P58335 489 aa18.92■□□□□ 0.62
CLDN11-208ENST00000488989 MAP3K10Q02779 954 aa18.92■□□□□ 0.62
CLDN11-208ENST00000488989 ZSCAN29Q8IWY8 852 aaPredicted RBP18.92■□□□□ 0.62
CLDN11-208ENST00000488989 SLC44A5Q8NCS7 719 aa18.92■□□□□ 0.62
CLDN11-208ENST00000488989 ESR2Q92731 530 aa18.92■□□□□ 0.62
CLDN11-208ENST00000488989 DNAJC18Q9H819 358 aa18.92■□□□□ 0.62
CLDN11-208ENST00000488989 PDRG1Q9NUG6 133 aa18.92■□□□□ 0.62
CLDN11-208ENST00000488989 ZSWIM5Q9P217 1185 aa18.92■□□□□ 0.62
CLDN11-208ENST00000488989 HERC5Q9UII4 1024 aaKnown RBP18.92■□□□□ 0.62
CLDN11-208ENST00000488989 KDM4AO75164 1064 aa18.91■□□□□ 0.62
CLDN11-208ENST00000488989 RASA1P20936 1047 aa18.91■□□□□ 0.62
CLDN11-208ENST00000488989 SHMT1P34896 483 aa18.91■□□□□ 0.62
CLDN11-208ENST00000488989 ANP32AP39687 249 aaKnown RBP18.91■□□□□ 0.62
CLDN11-208ENST00000488989 CYB5R4Q7L1T6 521 aa18.91■□□□□ 0.62
CLDN11-208ENST00000488989 PNMA8AQ86V59 439 aaPredicted RBP18.91■□□□□ 0.62
CLDN11-208ENST00000488989 STK11IPQ8N1F8 1099 aa18.91■□□□□ 0.62
CLDN11-208ENST00000488989 CSRNP1Q96S65 589 aa18.91■□□□□ 0.62
CLDN11-208ENST00000488989 DEFB129Q9H1M3 183 aa18.91■□□□□ 0.62
CLDN11-208ENST00000488989 PRC1O43663 620 aa18.9■□□□□ 0.62
CLDN11-208ENST00000488989 PRDM1O75626 825 aa18.9■□□□□ 0.62
CLDN11-208ENST00000488989 CD2BP2O95400 341 aaKnown RBP18.9■□□□□ 0.62
CLDN11-208ENST00000488989 MCM2P49736 904 aa18.9■□□□□ 0.62
CLDN11-208ENST00000488989 RRP12Q5JTH9 1297 aaKnown RBP18.9■□□□□ 0.62
CLDN11-208ENST00000488989 TATDN1Q6P1N9 297 aa18.9■□□□□ 0.62
CLDN11-208ENST00000488989 TMEM87BQ96K49 555 aa18.9■□□□□ 0.62
CLDN11-208ENST00000488989 MKNK2Q9HBH9 465 aa18.9■□□□□ 0.62
CLDN11-208ENST00000488989 PLIN4Q96Q06 1357 aa18.9■□□□□ 0.62
CLDN11-208ENST00000488989 VEGFAP15692 232 aaPredicted RBP18.89■□□□□ 0.61
CLDN11-208ENST00000488989 CDAN1Q8IWY9 1227 aa18.89■□□□□ 0.61
CLDN11-208ENST00000488989 ZNF444Q8N0Y2 327 aaPredicted RBP18.89■□□□□ 0.61
CLDN11-208ENST00000488989 TOMM22Q9NS69 142 aa18.89■□□□□ 0.61
CLDN11-208ENST00000488989 RANBP6O60518 1105 aaKnown RBP18.88■□□□□ 0.61
CLDN11-208ENST00000488989 AK2P54819 239 aa18.88■□□□□ 0.61
CLDN11-208ENST00000488989 TOB2Q14106 344 aaPredicted RBP18.88■□□□□ 0.61
CLDN11-208ENST00000488989 ANKRD1Q15327 319 aa18.88■□□□□ 0.61
CLDN11-208ENST00000488989 CRACR2BQ8N4Y2 399 aaPredicted RBP18.88■□□□□ 0.61
CLDN11-208ENST00000488989 NEDD1Q8NHV4 660 aa18.88■□□□□ 0.61
CLDN11-208ENST00000488989 IGDCC4Q8TDY8 1250 aa18.88■□□□□ 0.61
CLDN11-208ENST00000488989 DCPSQ96C86 337 aaKnown RBP18.88■□□□□ 0.61
CLDN11-208ENST00000488989 CCDC17Q96LX7 622 aa18.88■□□□□ 0.61
CLDN11-208ENST00000488989 TCEANC2Q96MN5 208 aa18.88■□□□□ 0.61
CLDN11-208ENST00000488989 TCP11L1Q9NUJ3 509 aa18.88■□□□□ 0.61
CLDN11-208ENST00000488989 ATAD5Q96QE3 1844 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms