RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 PI4KBQ9UBF8 816 aa14.57□□□□□ -0.08
CCHCR1-215ENST00000488920 HTTP42858 3142 aa14.57□□□□□ -0.08
CCHCR1-215ENST00000488920 MAGEB6Q8N7X4 407 aa14.56□□□□□ -0.08
CCHCR1-215ENST00000488920 MIGA1Q8NAN2 632 aa14.56□□□□□ -0.08
CCHCR1-215ENST00000488920 DHX36Q9H2U1 1008 aaKnown RBP14.56□□□□□ -0.08
CCHCR1-215ENST00000488920 SAP30BPQ9UHR5 308 aaKnown RBP14.56□□□□□ -0.08
CCHCR1-215ENST00000488920 PALD1Q9ULE6 856 aa14.56□□□□□ -0.08
CCHCR1-215ENST00000488920 PTCH2Q9Y6C5 1203 aa14.56□□□□□ -0.08
CCHCR1-215ENST00000488920 IGSF3O75054 1194 aa14.55□□□□□ -0.08
CCHCR1-215ENST00000488920 CTGFP29279 349 aa14.55□□□□□ -0.08
CCHCR1-215ENST00000488920 CAP2P40123 477 aa14.55□□□□□ -0.08
CCHCR1-215ENST00000488920 PSMC4P43686 418 aa14.55□□□□□ -0.08
CCHCR1-215ENST00000488920 CLASRPQ8N2M8 674 aaKnown RBP14.55□□□□□ -0.08
CCHCR1-215ENST00000488920 ARMC5Q96C12 935 aa14.55□□□□□ -0.08
CCHCR1-215ENST00000488920 KIF1BPQ96EK5 621 aa14.55□□□□□ -0.08
CCHCR1-215ENST00000488920 PARK7Q99497 189 aaKnown RBP14.55□□□□□ -0.08
CCHCR1-215ENST00000488920 CHMP4BQ9H444 224 aaKnown RBP14.55□□□□□ -0.08
CCHCR1-215ENST00000488920 HERC5Q9UII4 1024 aaKnown RBP14.55□□□□□ -0.08
CCHCR1-215ENST00000488920 FLT1P17948 1338 aa14.55□□□□□ -0.08
CCHCR1-215ENST00000488920 ADGRA2Q96PE1 1338 aa14.55□□□□□ -0.08
CCHCR1-215ENST00000488920 POTEFA5A3E0 1075 aa14.54□□□□□ -0.08
CCHCR1-215ENST00000488920 FMNL1O95466 1100 aaPredicted RBP14.54□□□□□ -0.08
CCHCR1-215ENST00000488920 IFIT2P09913 472 aaKnown RBP14.54□□□□□ -0.08
CCHCR1-215ENST00000488920 MAP3K12Q12852 859 aa14.54□□□□□ -0.08
CCHCR1-215ENST00000488920 SPP2Q13103 211 aa14.54□□□□□ -0.08
CCHCR1-215ENST00000488920 PDE3AQ14432 1141 aa14.54□□□□□ -0.08
CCHCR1-215ENST00000488920 SLC4A8Q2Y0W8 1093 aa14.54□□□□□ -0.08
CCHCR1-215ENST00000488920 SLC9C1Q4G0N8 1177 aa14.54□□□□□ -0.08
CCHCR1-215ENST00000488920 FOXP4Q8IVH2 680 aaPredicted RBP14.54□□□□□ -0.08
CCHCR1-215ENST00000488920 TRIM47Q96LD4 638 aa14.54□□□□□ -0.08
CCHCR1-215ENST00000488920 COL2A1P02458 1487 aaPredicted RBP14.54□□□□□ -0.08
CCHCR1-215ENST00000488920 RAB11FIP3O75154 756 aa14.53□□□□□ -0.08
CCHCR1-215ENST00000488920 MYCP01106 439 aaPredicted RBP14.53□□□□□ -0.08
CCHCR1-215ENST00000488920 JAG1P78504 1218 aa14.53□□□□□ -0.08
CCHCR1-215ENST00000488920 NBPF11Q86T75 865 aa14.53□□□□□ -0.08
CCHCR1-215ENST00000488920 CRACR2BQ8N4Y2 399 aaPredicted RBP14.53□□□□□ -0.08
CCHCR1-215ENST00000488920 ZNF280CQ8ND82 737 aa14.53□□□□□ -0.08
CCHCR1-215ENST00000488920 TNRC18O15417 2968 aaPredicted RBP14.52□□□□□ -0.08
CCHCR1-215ENST00000488920 USP17L5A8MUK1 530 aa14.52□□□□□ -0.09
CCHCR1-215ENST00000488920 GNRH1P01148 92 aa14.52□□□□□ -0.09
CCHCR1-215ENST00000488920 BCRP11274 1271 aa14.52□□□□□ -0.09
CCHCR1-215ENST00000488920 USP5P45974 858 aa14.52□□□□□ -0.09
CCHCR1-215ENST00000488920 TREML2Q5T2D2 321 aa14.52□□□□□ -0.09
CCHCR1-215ENST00000488920 METTL16Q86W50 562 aaKnown RBP14.52□□□□□ -0.09
CCHCR1-215ENST00000488920 SH3TC2Q8TF17 1288 aa14.52□□□□□ -0.09
CCHCR1-215ENST00000488920 ZNF333Q96JL9 665 aa14.52□□□□□ -0.09
CCHCR1-215ENST00000488920 DNAJC2Q99543 621 aaKnown RBP14.52□□□□□ -0.09
CCHCR1-215ENST00000488920 TRIM34Q9BYJ4 488 aa14.52□□□□□ -0.09
CCHCR1-215ENST00000488920 DNAJC18Q9H819 358 aa14.52□□□□□ -0.09
CCHCR1-215ENST00000488920 AGTPBP1Q9UPW5 1226 aa14.52□□□□□ -0.09
CCHCR1-215ENST00000488920 SLC45A1Q9Y2W3 748 aa14.52□□□□□ -0.09
CCHCR1-215ENST00000488920 DOCK2Q92608 1830 aa14.52□□□□□ -0.09
CCHCR1-215ENST00000488920 CENPFP49454 3210 aa14.51□□□□□ -0.09
CCHCR1-215ENST00000488920 GOLIM4O00461 696 aa14.51□□□□□ -0.09
CCHCR1-215ENST00000488920 EN2P19622 333 aaPredicted RBP14.51□□□□□ -0.09
CCHCR1-215ENST00000488920 OSBPP22059 807 aa14.51□□□□□ -0.09
CCHCR1-215ENST00000488920 HOXD10P28358 340 aa14.51□□□□□ -0.09
CCHCR1-215ENST00000488920 HMGCS2P54868 508 aa14.51□□□□□ -0.09
CCHCR1-215ENST00000488920 TTF1Q15361 905 aaPredicted RBP14.51□□□□□ -0.09
CCHCR1-215ENST00000488920 SHROOM1Q2M3G4 852 aaPredicted RBP14.51□□□□□ -0.09
CCHCR1-215ENST00000488920 SLC9C2Q5TAH2 1124 aa14.51□□□□□ -0.09
CCHCR1-215ENST00000488920 SMCR8Q8TEV9 937 aaPredicted RBP14.51□□□□□ -0.09
CCHCR1-215ENST00000488920 TMEM106CQ9BVX2 250 aa14.51□□□□□ -0.09
CCHCR1-215ENST00000488920 SRRDQ9UH36 339 aa14.51□□□□□ -0.09
CCHCR1-215ENST00000488920 GDF11O95390 407 aa14.5□□□□□ -0.09
CCHCR1-215ENST00000488920 HLA-DOAP06340 250 aa14.5□□□□□ -0.09
CCHCR1-215ENST00000488920 PDE6AP16499 860 aa14.5□□□□□ -0.09
CCHCR1-215ENST00000488920 PRMT2P55345 433 aa14.5□□□□□ -0.09
CCHCR1-215ENST00000488920 CERS3Q8IU89 383 aa14.5□□□□□ -0.09
CCHCR1-215ENST00000488920 PROCA1Q8NCQ7 364 aaPredicted RBP14.5□□□□□ -0.09
CCHCR1-215ENST00000488920 EDC3Q96F86 508 aaKnown RBP14.5□□□□□ -0.09
CCHCR1-215ENST00000488920 TBC1D2Q9BYX2 928 aa14.5□□□□□ -0.09
CCHCR1-215ENST00000488920 MAGEB6P1A0A0J9YX57 407 aa14.49□□□□□ -0.09
CCHCR1-215ENST00000488920 SMARCA5O60264 1052 aaPredicted RBP14.49□□□□□ -0.09
CCHCR1-215ENST00000488920 ASNSP08243 561 aa14.49□□□□□ -0.09
CCHCR1-215ENST00000488920 FCGRTP55899 365 aa14.49□□□□□ -0.09
CCHCR1-215ENST00000488920 TMED8Q6PL24 325 aaPredicted RBP14.49□□□□□ -0.09
CCHCR1-215ENST00000488920 ANKRD13CQ8N6S4 541 aa14.49□□□□□ -0.09
CCHCR1-215ENST00000488920 RAET1EQ8TD07 263 aa14.49□□□□□ -0.09
CCHCR1-215ENST00000488920 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.49□□□□□ -0.09
CCHCR1-215ENST00000488920 RIOK1Q9BRS2 568 aaKnown RBP14.49□□□□□ -0.09
CCHCR1-215ENST00000488920 WDR18Q9BV38 432 aa14.49□□□□□ -0.09
CCHCR1-215ENST00000488920 BOLA2Q9H3K6 86 aa14.49□□□□□ -0.09
CCHCR1-215ENST00000488920 AS3MTQ9HBK9 375 aa14.49□□□□□ -0.09
CCHCR1-215ENST00000488920 MYPNQ86TC9 1320 aa14.48□□□□□ -0.09
CCHCR1-215ENST00000488920 ZNF532Q9HCE3 1301 aa14.48□□□□□ -0.09
CCHCR1-215ENST00000488920 PRKCZQ05513 592 aa14.48□□□□□ -0.09
CCHCR1-215ENST00000488920 MTMR2Q13614 643 aa14.48□□□□□ -0.09
CCHCR1-215ENST00000488920 PNMA3Q9UL41 463 aa14.48□□□□□ -0.09
CCHCR1-215ENST00000488920 GABRQQ9UN88 632 aa14.48□□□□□ -0.09
CCHCR1-215ENST00000488920 TCRBV5S4A2TA0A5A2 114 aa14.47□□□□□ -0.09
CCHCR1-215ENST00000488920 ATP5JP18859 108 aa14.47□□□□□ -0.09
CCHCR1-215ENST00000488920 BACE1P56817 501 aa14.47□□□□□ -0.09
CCHCR1-215ENST00000488920 SLFNL1Q499Z3 407 aa14.47□□□□□ -0.09
CCHCR1-215ENST00000488920 SH3D19Q5HYK7 790 aa14.47□□□□□ -0.09
CCHCR1-215ENST00000488920 TTC6Q86TZ1 520 aa14.47□□□□□ -0.09
CCHCR1-215ENST00000488920 LRRCC1Q9C099 1032 aa14.47□□□□□ -0.09
CCHCR1-215ENST00000488920 ASCC2Q9H1I8 757 aaPredicted RBP14.47□□□□□ -0.09
CCHCR1-215ENST00000488920 PAG1Q9NWQ8 432 aa14.47□□□□□ -0.09
CCHCR1-215ENST00000488920 TMOD4Q9NZQ9 345 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms