RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 ZNF296Q8WUU4 475 aaPredicted RBP13.51□□□□□ -0.25
ARHGEF39-204ENST00000488918 ERO1AQ96HE7 468 aa13.51□□□□□ -0.25
ARHGEF39-204ENST00000488918 TBC1D2Q9BYX2 928 aa13.51□□□□□ -0.25
ARHGEF39-204ENST00000488918 TRIM75PA6NK02 468 aa13.5□□□□□ -0.25
ARHGEF39-204ENST00000488918 IGF2BP3O00425 579 aaKnown RBP eCLIP13.5□□□□□ -0.25
ARHGEF39-204ENST00000488918 CXCL11O14625 94 aa13.5□□□□□ -0.25
ARHGEF39-204ENST00000488918 GLRX3O76003 335 aaKnown RBP13.5□□□□□ -0.25
ARHGEF39-204ENST00000488918 PTPRAP18433 802 aa13.5□□□□□ -0.25
ARHGEF39-204ENST00000488918 MX1P20591 662 aa13.5□□□□□ -0.25
ARHGEF39-204ENST00000488918 CRHR2Q13324 411 aa13.5□□□□□ -0.25
ARHGEF39-204ENST00000488918 HDAC1Q13547 482 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF39-204ENST00000488918 PKN2Q16513 984 aaKnown RBP13.5□□□□□ -0.25
ARHGEF39-204ENST00000488918 SH3BP5LQ7L8J4 393 aa13.5□□□□□ -0.25
ARHGEF39-204ENST00000488918 ZCCHC17Q9NP64 241 aaKnown RBP13.5□□□□□ -0.25
ARHGEF39-204ENST00000488918 CABP5Q9NP86 173 aa13.5□□□□□ -0.25
ARHGEF39-204ENST00000488918 MCM9Q9NXL9 1143 aa13.5□□□□□ -0.25
ARHGEF39-204ENST00000488918 AKAP11Q9UKA4 1901 aa13.5□□□□□ -0.25
ARHGEF39-204ENST00000488918 COL2A1P02458 1487 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF39-204ENST00000488918 RFX7Q2KHR2 1363 aa13.49□□□□□ -0.25
ARHGEF39-204ENST00000488918 TESPA1A2RU30 521 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF39-204ENST00000488918 CCDC85CA6NKD9 419 aa13.49□□□□□ -0.25
ARHGEF39-204ENST00000488918 FAM196BA6NMK8 535 aa13.49□□□□□ -0.25
ARHGEF39-204ENST00000488918 ZFYP08048 801 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF39-204ENST00000488918 ASNSP08243 561 aa13.49□□□□□ -0.25
ARHGEF39-204ENST00000488918 PABPC4Q13310 644 aaKnown RBP eCLIP13.49□□□□□ -0.25
ARHGEF39-204ENST00000488918 NOM1Q5C9Z4 860 aaKnown RBP13.49□□□□□ -0.25
ARHGEF39-204ENST00000488918 BRI3BPQ8WY22 251 aa13.49□□□□□ -0.25
ARHGEF39-204ENST00000488918 EDC3Q96F86 508 aaKnown RBP13.49□□□□□ -0.25
ARHGEF39-204ENST00000488918 MS4A4AQ96JQ5 239 aa13.49□□□□□ -0.25
ARHGEF39-204ENST00000488918 PARK7Q99497 189 aaKnown RBP13.49□□□□□ -0.25
ARHGEF39-204ENST00000488918 FSD1Q9BTV5 496 aa13.49□□□□□ -0.25
ARHGEF39-204ENST00000488918 CFHR5Q9BXR6 569 aa13.49□□□□□ -0.25
ARHGEF39-204ENST00000488918 MCOLN1Q9GZU1 580 aa13.49□□□□□ -0.25
ARHGEF39-204ENST00000488918 MAST2Q6P0Q8 1798 aa13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 USP17L5A8MUK1 530 aa13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 PHF20L1A8MW92 1017 aa13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 PDHXO00330 501 aa13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 MBD4O95243 580 aa13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 ADD2P35612 726 aa13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 CAP2P40123 477 aa13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 SP3Q02447 781 aa13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 MAP3K10Q02779 954 aa13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 UBE3CQ15386 1083 aa13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 ANKRD23Q86SG2 305 aa13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 EXOC6Q8TAG9 804 aa13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 SMCR8Q8TEV9 937 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 ABHD8Q96I13 439 aa13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 GINM1Q9NU53 330 aa13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 TMOD4Q9NZQ9 345 aa13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 SERPINB13Q9UIV8 391 aa13.48□□□□□ -0.25
ARHGEF39-204ENST00000488918 BTBD19C9JJ37 291 aa13.47□□□□□ -0.25
ARHGEF39-204ENST00000488918 APPP05067 770 aa13.47□□□□□ -0.25
ARHGEF39-204ENST00000488918 TSHZ3Q63HK5 1081 aa13.47□□□□□ -0.25
ARHGEF39-204ENST00000488918 B4GALNT3Q6L9W6 998 aa13.47□□□□□ -0.25
ARHGEF39-204ENST00000488918 KBTBD3Q8NAB2 608 aa13.47□□□□□ -0.25
ARHGEF39-204ENST00000488918 ZNF280CQ8ND82 737 aa13.47□□□□□ -0.25
ARHGEF39-204ENST00000488918 FEZ1Q99689 392 aa13.47□□□□□ -0.25
ARHGEF39-204ENST00000488918 PTPN18Q99952 460 aa13.47□□□□□ -0.25
ARHGEF39-204ENST00000488918 ARMT1Q9H993 441 aa13.47□□□□□ -0.25
ARHGEF39-204ENST00000488918 ATP8A2Q9NTI2 1148 aa13.47□□□□□ -0.25
ARHGEF39-204ENST00000488918 PNMA3Q9UL41 463 aa13.47□□□□□ -0.25
ARHGEF39-204ENST00000488918 KCNH4Q9UQ05 1017 aa13.47□□□□□ -0.25
ARHGEF39-204ENST00000488918 SLC4A4Q9Y6R1 1079 aa13.47□□□□□ -0.25
ARHGEF39-204ENST00000488918 MPHOSPH10O00566 681 aaKnown RBP13.46□□□□□ -0.25
ARHGEF39-204ENST00000488918 RNF113AO15541 343 aaKnown RBP13.46□□□□□ -0.25
ARHGEF39-204ENST00000488918 SPP2Q13103 211 aa13.46□□□□□ -0.25
ARHGEF39-204ENST00000488918 CERKLQ49MI3 558 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF39-204ENST00000488918 FAM43AQ8N2R8 423 aa13.46□□□□□ -0.25
ARHGEF39-204ENST00000488918 LCORLQ8N3X6 602 aa13.46□□□□□ -0.25
ARHGEF39-204ENST00000488918 TRIM17Q9Y577 477 aa13.46□□□□□ -0.25
ARHGEF39-204ENST00000488918 A0A0G2JLL6 359 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF39-204ENST00000488918 TLR2O60603 784 aa13.45□□□□□ -0.26
ARHGEF39-204ENST00000488918 GDF11O95390 407 aa13.45□□□□□ -0.26
ARHGEF39-204ENST00000488918 GNAT2P19087 354 aa13.45□□□□□ -0.26
ARHGEF39-204ENST00000488918 OSBPP22059 807 aa13.45□□□□□ -0.26
ARHGEF39-204ENST00000488918 RAB3GAP1Q15042 981 aa13.45□□□□□ -0.26
ARHGEF39-204ENST00000488918 PRRT2Q7Z6L0 340 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF39-204ENST00000488918 SDR42E1Q8WUS8 393 aa13.45□□□□□ -0.26
ARHGEF39-204ENST00000488918 RIOK1Q9BRS2 568 aaKnown RBP13.45□□□□□ -0.26
ARHGEF39-204ENST00000488918 NACAP1Q9BZK3 213 aa13.45□□□□□ -0.26
ARHGEF39-204ENST00000488918 EHD4Q9H223 541 aa13.45□□□□□ -0.26
ARHGEF39-204ENST00000488918 EFCC1Q9HA90 598 aa13.45□□□□□ -0.26
ARHGEF39-204ENST00000488918 AFG3L2Q9Y4W6 797 aa13.45□□□□□ -0.26
ARHGEF39-204ENST00000488918 DOCK2Q92608 1830 aa13.45□□□□□ -0.26
ARHGEF39-204ENST00000488918 TCRBV5S4A2TA0A5A2 114 aa13.44□□□□□ -0.26
ARHGEF39-204ENST00000488918 TRIM6-TRIM34B2RNG4 842 aa13.44□□□□□ -0.26
ARHGEF39-204ENST00000488918 HOXD10P28358 340 aa13.44□□□□□ -0.26
ARHGEF39-204ENST00000488918 ABCB5Q2M3G0 1257 aa13.44□□□□□ -0.26
ARHGEF39-204ENST00000488918 PROCA1Q8NCQ7 364 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF39-204ENST00000488918 CD99L2Q8TCZ2 262 aa13.44□□□□□ -0.26
ARHGEF39-204ENST00000488918 APPBP2Q92624 585 aa13.44□□□□□ -0.26
ARHGEF39-204ENST00000488918 LNPKQ9C0E8 428 aa13.44□□□□□ -0.26
ARHGEF39-204ENST00000488918 ZNF287Q9HBT7 754 aa13.44□□□□□ -0.26
ARHGEF39-204ENST00000488918 DCP1AQ9NPI6 582 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF39-204ENST00000488918 SWAP70Q9UH65 585 aa13.44□□□□□ -0.26
ARHGEF39-204ENST00000488918 TAOK2Q9UL54 1235 aa13.44□□□□□ -0.26
ARHGEF39-204ENST00000488918 C19orf81C9J6K1 198 aa13.43□□□□□ -0.26
ARHGEF39-204ENST00000488918 USP17L10C9JJH3 530 aa13.43□□□□□ -0.26
ARHGEF39-204ENST00000488918 TDO2P48775 406 aa13.43□□□□□ -0.26
ARHGEF39-204ENST00000488918 HMGCS2P54868 508 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms