RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 DDX60LQ5H9U9 1706 aaKnown RBP21.57■■□□□ 1.04
ITGB1-215ENST00000488494 PDE6AP16499 860 aa21.56■■□□□ 1.04
ITGB1-215ENST00000488494 SP3Q02447 781 aa21.56■■□□□ 1.04
ITGB1-215ENST00000488494 MOGSQ13724 837 aa21.56■■□□□ 1.04
ITGB1-215ENST00000488494 TMED8Q6PL24 325 aaPredicted RBP21.56■■□□□ 1.04
ITGB1-215ENST00000488494 ANKRD23Q86SG2 305 aa21.56■■□□□ 1.04
ITGB1-215ENST00000488494 CCDC84Q86UT8 332 aaPredicted RBP21.56■■□□□ 1.04
ITGB1-215ENST00000488494 CERS3Q8IU89 383 aa21.56■■□□□ 1.04
ITGB1-215ENST00000488494 HERC5Q9UII4 1024 aaKnown RBP21.56■■□□□ 1.04
ITGB1-215ENST00000488494 HPS5Q9UPZ3 1129 aa21.56■■□□□ 1.04
ITGB1-215ENST00000488494 TRIM17Q9Y577 477 aa21.56■■□□□ 1.04
ITGB1-215ENST00000488494 PDHXO00330 501 aa21.55■■□□□ 1.04
ITGB1-215ENST00000488494 SLC4A8Q2Y0W8 1093 aa21.55■■□□□ 1.04
ITGB1-215ENST00000488494 FBXO46Q6PJ61 603 aaPredicted RBP21.55■■□□□ 1.04
ITGB1-215ENST00000488494 BOLA2Q9H3K6 86 aa21.55■■□□□ 1.04
ITGB1-215ENST00000488494 PAG1Q9NWQ8 432 aa21.55■■□□□ 1.04
ITGB1-215ENST00000488494 PI4KBQ9UBF8 816 aa21.55■■□□□ 1.04
ITGB1-215ENST00000488494 PALD1Q9ULE6 856 aa21.55■■□□□ 1.04
ITGB1-215ENST00000488494 NAV1Q8NEY1 1877 aa21.54■■□□□ 1.04
ITGB1-215ENST00000488494 A0A0G2JLL6 359 aaPredicted RBP21.54■■□□□ 1.04
ITGB1-215ENST00000488494 TRIM75PA6NK02 468 aa21.54■■□□□ 1.04
ITGB1-215ENST00000488494 CXCL11O14625 94 aa21.54■■□□□ 1.04
ITGB1-215ENST00000488494 ATP5JP18859 108 aa21.54■■□□□ 1.04
ITGB1-215ENST00000488494 USP5P45974 858 aa21.54■■□□□ 1.04
ITGB1-215ENST00000488494 SLC9C2Q5TAH2 1124 aa21.54■■□□□ 1.04
ITGB1-215ENST00000488494 OTOP1Q7RTM1 612 aa21.54■■□□□ 1.04
ITGB1-215ENST00000488494 PRRT2Q7Z6L0 340 aaPredicted RBP21.54■■□□□ 1.04
ITGB1-215ENST00000488494 DNAJC18Q9H819 358 aa21.54■■□□□ 1.04
ITGB1-215ENST00000488494 AFG3L2Q9Y4W6 797 aa21.54■■□□□ 1.04
ITGB1-215ENST00000488494 PTPRFP10586 1907 aa21.54■■□□□ 1.04
ITGB1-215ENST00000488494 TLR2O60603 784 aa21.53■■□□□ 1.04
ITGB1-215ENST00000488494 RRP1BQ14684 758 aaKnown RBP21.53■■□□□ 1.04
ITGB1-215ENST00000488494 CRACR2BQ8N4Y2 399 aaPredicted RBP21.53■■□□□ 1.04
ITGB1-215ENST00000488494 HAUS7Q99871 368 aa21.53■■□□□ 1.04
ITGB1-215ENST00000488494 RIOK1Q9BRS2 568 aaKnown RBP21.53■■□□□ 1.04
ITGB1-215ENST00000488494 TRIM34Q9BYJ4 488 aa21.53■■□□□ 1.04
ITGB1-215ENST00000488494 DCTPP1Q9H773 170 aa21.53■■□□□ 1.04
ITGB1-215ENST00000488494 PCDHB15Q9Y5E8 787 aa21.53■■□□□ 1.04
ITGB1-215ENST00000488494 ZNF532Q9HCE3 1301 aa21.53■■□□□ 1.04
ITGB1-215ENST00000488494 ZSWIM8A7E2V4 1837 aa21.52■■□□□ 1.04
ITGB1-215ENST00000488494 MAGEB6P1A0A0J9YX57 407 aa21.52■■□□□ 1.04
ITGB1-215ENST00000488494 HLA-DOAP06340 250 aa21.52■■□□□ 1.04
ITGB1-215ENST00000488494 CAP2P40123 477 aa21.52■■□□□ 1.04
ITGB1-215ENST00000488494 CAP1Q01518 475 aa21.52■■□□□ 1.04
ITGB1-215ENST00000488494 GADL1Q6ZQY3 521 aa21.52■■□□□ 1.04
ITGB1-215ENST00000488494 CRBNQ96SW2 442 aa21.52■■□□□ 1.04
ITGB1-215ENST00000488494 LOC285556D6RIA3 1793 aa21.51■■□□□ 1.03
ITGB1-215ENST00000488494 MYH1P12882 1939 aa21.51■■□□□ 1.03
ITGB1-215ENST00000488494 TCRBV5S4A2TA0A5A2 114 aa21.51■■□□□ 1.03
ITGB1-215ENST00000488494 GPAT2Q6NUI2 795 aa21.51■■□□□ 1.03
ITGB1-215ENST00000488494 PARK7Q99497 189 aaKnown RBP21.51■■□□□ 1.03
ITGB1-215ENST00000488494 EFCC1Q9HA90 598 aa21.51■■□□□ 1.03
ITGB1-215ENST00000488494 ADGRA2Q96PE1 1338 aa21.51■■□□□ 1.03
ITGB1-215ENST00000488494 SOX10P56693 466 aa21.5■■□□□ 1.03
ITGB1-215ENST00000488494 FASTKD5Q7L8L6 764 aaKnown RBP21.5■■□□□ 1.03
ITGB1-215ENST00000488494 TSHZ3Q63HK5 1081 aa21.49■■□□□ 1.03
ITGB1-215ENST00000488494 METTL16Q86W50 562 aaKnown RBP21.49■■□□□ 1.03
ITGB1-215ENST00000488494 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.49■■□□□ 1.03
ITGB1-215ENST00000488494 ECHDC1Q9NTX5 307 aa21.49■■□□□ 1.03
ITGB1-215ENST00000488494 CPA4Q9UI42 421 aa21.49■■□□□ 1.03
ITGB1-215ENST00000488494 GDF11O95390 407 aa21.48■■□□□ 1.03
ITGB1-215ENST00000488494 CYP2C8P10632 490 aa21.48■■□□□ 1.03
ITGB1-215ENST00000488494 LACTBP83111 547 aaPredicted RBP21.48■■□□□ 1.03
ITGB1-215ENST00000488494 SHROOM1Q2M3G4 852 aaPredicted RBP21.48■■□□□ 1.03
ITGB1-215ENST00000488494 SLFNL1Q499Z3 407 aa21.48■■□□□ 1.03
ITGB1-215ENST00000488494 FOXP4Q8IVH2 680 aaPredicted RBP21.48■■□□□ 1.03
ITGB1-215ENST00000488494 LCORLQ8N3X6 602 aa21.48■■□□□ 1.03
ITGB1-215ENST00000488494 GPATCH3Q96I76 525 aa21.48■■□□□ 1.03
ITGB1-215ENST00000488494 CRNKL1Q9BZJ0 848 aaKnown RBP21.48■■□□□ 1.03
ITGB1-215ENST00000488494 ARHGAP39Q9C0H5 1083 aa21.48■■□□□ 1.03
ITGB1-215ENST00000488494 MYH7P12883 1935 aa21.48■■□□□ 1.03
ITGB1-215ENST00000488494 USP17L5A8MUK1 530 aa21.47■■□□□ 1.03
ITGB1-215ENST00000488494 ADD2P35612 726 aa21.47■■□□□ 1.03
ITGB1-215ENST00000488494 JAG1P78504 1218 aa21.47■■□□□ 1.03
ITGB1-215ENST00000488494 SPP2Q13103 211 aa21.47■■□□□ 1.03
ITGB1-215ENST00000488494 ZNF280CQ8ND82 737 aa21.47■■□□□ 1.03
ITGB1-215ENST00000488494 TBC1D2Q9BYX2 928 aa21.47■■□□□ 1.03
ITGB1-215ENST00000488494 PTPN22Q9Y2R2 807 aa21.47■■□□□ 1.03
ITGB1-215ENST00000488494 ECM2O94769 699 aaPredicted RBP21.46■■□□□ 1.03
ITGB1-215ENST00000488494 CHGBP05060 677 aa21.46■■□□□ 1.03
ITGB1-215ENST00000488494 ASNSP08243 561 aa21.46■■□□□ 1.03
ITGB1-215ENST00000488494 KIF22Q14807 665 aa21.46■■□□□ 1.03
ITGB1-215ENST00000488494 C17orf99Q6UX52 265 aa21.46■■□□□ 1.03
ITGB1-215ENST00000488494 EHD4Q9H223 541 aa21.46■■□□□ 1.03
ITGB1-215ENST00000488494 ARMT1Q9H993 441 aa21.46■■□□□ 1.03
ITGB1-215ENST00000488494 SERPINB13Q9UIV8 391 aa21.46■■□□□ 1.03
ITGB1-215ENST00000488494 ZBTB21Q9ULJ3 1066 aa21.46■■□□□ 1.03
ITGB1-215ENST00000488494 AGTPBP1Q9UPW5 1226 aa21.46■■□□□ 1.03
ITGB1-215ENST00000488494 CENPFP49454 3210 aa21.46■■□□□ 1.03
ITGB1-215ENST00000488494 MBD4O95243 580 aa21.45■■□□□ 1.02
ITGB1-215ENST00000488494 HMGCS2P54868 508 aa21.45■■□□□ 1.02
ITGB1-215ENST00000488494 ARHGEF6Q15052 776 aa21.45■■□□□ 1.02
ITGB1-215ENST00000488494 TREML2Q5T2D2 321 aa21.45■■□□□ 1.02
ITGB1-215ENST00000488494 AS3MTQ9HBK9 375 aa21.45■■□□□ 1.02
ITGB1-215ENST00000488494 SLC45A1Q9Y2W3 748 aa21.45■■□□□ 1.02
ITGB1-215ENST00000488494 MTMR2Q13614 643 aa21.44■■□□□ 1.02
ITGB1-215ENST00000488494 TTC6Q86TZ1 520 aa21.44■■□□□ 1.02
ITGB1-215ENST00000488494 PROCA1Q8NCQ7 364 aaPredicted RBP21.44■■□□□ 1.02
ITGB1-215ENST00000488494 SDR42E1Q8WUS8 393 aa21.44■■□□□ 1.02
ITGB1-215ENST00000488494 RGS19P49795 217 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms