RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 ZNF428Q96B54 188 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 HSH2DQ96JZ2 352 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 TEX13AQ9BXU3 409 aaPredicted RBP7.76□□□□□ -1.17
CDHR3-213ENST00000488386 PRKRIP1Q9H875 184 aaPredicted RBP7.76□□□□□ -1.17
CDHR3-213ENST00000488386 ADAMTS8Q9UP79 889 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 CHMP3Q9Y3E7 222 aa7.76□□□□□ -1.17
CDHR3-213ENST00000488386 LAS1LQ9Y4W2 734 aaKnown RBP7.76□□□□□ -1.17
CDHR3-213ENST00000488386 CCDC88AQ3V6T2 1871 aa7.75□□□□□ -1.17
CDHR3-213ENST00000488386 H7C1W4 665 aa7.75□□□□□ -1.17
CDHR3-213ENST00000488386 NPHP1O15259 732 aa7.75□□□□□ -1.17
CDHR3-213ENST00000488386 EIF2S2P20042 333 aaKnown RBP7.75□□□□□ -1.17
CDHR3-213ENST00000488386 TMPOP42166 694 aaKnown RBP7.75□□□□□ -1.17
CDHR3-213ENST00000488386 PRELPP51888 382 aa7.75□□□□□ -1.17
CDHR3-213ENST00000488386 C1QTNF8P60827 252 aa7.75□□□□□ -1.17
CDHR3-213ENST00000488386 C1orf53Q5VUE5 145 aa7.75□□□□□ -1.17
CDHR3-213ENST00000488386 C9orf131Q5VYM1 1079 aa7.75□□□□□ -1.17
CDHR3-213ENST00000488386 PHLDB3Q6NSJ2 640 aa7.75□□□□□ -1.17
CDHR3-213ENST00000488386 TTLL7Q6ZT98 887 aa7.75□□□□□ -1.17
CDHR3-213ENST00000488386 NPM2Q86SE8 214 aaKnown RBP7.75□□□□□ -1.17
CDHR3-213ENST00000488386 PGBD3Q8N328 593 aa7.75□□□□□ -1.17
CDHR3-213ENST00000488386 ZNF280CQ8ND82 737 aa7.75□□□□□ -1.17
CDHR3-213ENST00000488386 ZNF622Q969S3 477 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDHR3-213ENST00000488386 TSPYL4Q9UJ04 414 aa7.75□□□□□ -1.17
CDHR3-213ENST00000488386 USTQ9Y2C2 406 aa7.75□□□□□ -1.17
CDHR3-213ENST00000488386 SBF1O95248 1867 aa7.75□□□□□ -1.17
CDHR3-213ENST00000488386 TNRC6CQ9HCJ0 1690 aaKnown RBP7.74□□□□□ -1.17
CDHR3-213ENST00000488386 NUP98P52948 1817 aa7.74□□□□□ -1.17
CDHR3-213ENST00000488386 WDR43Q15061 677 aaKnown RBP eCLIP7.74□□□□□ -1.17
CDHR3-213ENST00000488386 PROSER3Q2NL68 480 aa7.74□□□□□ -1.17
CDHR3-213ENST00000488386 LRRC69Q6ZNQ3 347 aa7.74□□□□□ -1.17
CDHR3-213ENST00000488386 SLC51AQ86UW1 340 aa7.74□□□□□ -1.17
CDHR3-213ENST00000488386 CNBD1Q8NA66 436 aa7.74□□□□□ -1.17
CDHR3-213ENST00000488386 SETDB2Q96T68 719 aa7.74□□□□□ -1.17
CDHR3-213ENST00000488386 SLX4Q8IY92 1834 aa7.73□□□□□ -1.17
CDHR3-213ENST00000488386 H0YIN7 160 aa7.73□□□□□ -1.17
CDHR3-213ENST00000488386 GPTP24298 496 aa7.73□□□□□ -1.17
CDHR3-213ENST00000488386 EFHC2Q5JST6 749 aa7.73□□□□□ -1.17
CDHR3-213ENST00000488386 OLFM4Q6UX06 510 aa7.73□□□□□ -1.17
CDHR3-213ENST00000488386 PNISRQ8TF01 805 aaKnown RBP7.73□□□□□ -1.17
CDHR3-213ENST00000488386 GMCL1Q96IK5 515 aa7.73□□□□□ -1.17
CDHR3-213ENST00000488386 COL25A1Q9BXS0 654 aaPredicted RBP7.73□□□□□ -1.17
CDHR3-213ENST00000488386 ZCCHC2Q9C0B9 1178 aaKnown RBP7.73□□□□□ -1.17
CDHR3-213ENST00000488386 SAP130Q9H0E3 1048 aa7.73□□□□□ -1.17
CDHR3-213ENST00000488386 PNNQ9H307 717 aaKnown RBP7.73□□□□□ -1.17
CDHR3-213ENST00000488386 NMRK2Q9NPI5 230 aa7.73□□□□□ -1.17
CDHR3-213ENST00000488386 NDFIP2Q9NV92 336 aa7.73□□□□□ -1.17
CDHR3-213ENST00000488386 RNF181Q9P0P0 153 aa7.73□□□□□ -1.17
CDHR3-213ENST00000488386 SEPT3Q9UH03 358 aa7.73□□□□□ -1.17
CDHR3-213ENST00000488386 LRFN2Q9ULH4 789 aa7.73□□□□□ -1.17
CDHR3-213ENST00000488386 NIP7Q9Y221 180 aaKnown RBP eCLIP7.73□□□□□ -1.17
CDHR3-213ENST00000488386 DCDC2BA2VCK2 349 aa7.72□□□□□ -1.17
CDHR3-213ENST00000488386 BNIP3LO60238 219 aa7.72□□□□□ -1.17
CDHR3-213ENST00000488386 LBRQ14739 615 aaKnown RBP7.72□□□□□ -1.17
CDHR3-213ENST00000488386 RTN1Q16799 776 aa7.72□□□□□ -1.17
CDHR3-213ENST00000488386 NLRP8Q86W28 1048 aa7.72□□□□□ -1.17
CDHR3-213ENST00000488386 NBPF5PQ86XG9 351 aaPredicted RBP7.72□□□□□ -1.17
CDHR3-213ENST00000488386 TTLL6Q8N841 843 aa7.72□□□□□ -1.17
CDHR3-213ENST00000488386 VTI1AQ96AJ9 217 aa7.72□□□□□ -1.17
CDHR3-213ENST00000488386 RUNDC1Q96C34 613 aa7.72□□□□□ -1.17
CDHR3-213ENST00000488386 ABHD17AQ96GS6 310 aa7.72□□□□□ -1.17
CDHR3-213ENST00000488386 SUSD3Q96L08 255 aa7.72□□□□□ -1.17
CDHR3-213ENST00000488386 KLK14Q9P0G3 267 aa7.72□□□□□ -1.17
CDHR3-213ENST00000488386 TIAM2Q8IVF5 1701 aa7.72□□□□□ -1.17
CDHR3-213ENST00000488386 ABCC12Q96J65 1359 aa7.71□□□□□ -1.17
CDHR3-213ENST00000488386 NFKBIEO00221 500 aa7.71□□□□□ -1.18
CDHR3-213ENST00000488386 APAF1O14727 1248 aa7.71□□□□□ -1.18
CDHR3-213ENST00000488386 ST5P78524 1137 aa7.71□□□□□ -1.18
CDHR3-213ENST00000488386 AIMP1Q12904 312 aaKnown RBP7.71□□□□□ -1.18
CDHR3-213ENST00000488386 DGKZQ13574 1117 aa7.71□□□□□ -1.18
CDHR3-213ENST00000488386 NAA30Q147X3 362 aaPredicted RBP7.71□□□□□ -1.18
CDHR3-213ENST00000488386 FAM26DQ5JW98 314 aa7.71□□□□□ -1.18
CDHR3-213ENST00000488386 COX20Q5RI15 118 aa7.71□□□□□ -1.18
CDHR3-213ENST00000488386 MYO19Q96H55 970 aa7.71□□□□□ -1.18
CDHR3-213ENST00000488386 BRIP1Q9BX63 1249 aa7.71□□□□□ -1.18
CDHR3-213ENST00000488386 UBN2Q6ZU65 1347 aa7.71□□□□□ -1.18
CDHR3-213ENST00000488386 PDE6BP35913 854 aa7.7□□□□□ -1.18
CDHR3-213ENST00000488386 SUSD4Q5VX71 490 aa7.7□□□□□ -1.18
CDHR3-213ENST00000488386 KIF6Q6ZMV9 814 aa7.7□□□□□ -1.18
CDHR3-213ENST00000488386 LRP10Q7Z4F1 713 aa7.7□□□□□ -1.18
CDHR3-213ENST00000488386 CNTNAP3BQ96NU0 1288 aa7.7□□□□□ -1.18
CDHR3-213ENST00000488386 CNTNAP3Q9BZ76 1288 aa7.7□□□□□ -1.18
CDHR3-213ENST00000488386 ZNF652Q9Y2D9 606 aa7.7□□□□□ -1.18
CDHR3-213ENST00000488386 GPC6Q9Y625 555 aaPredicted RBP7.7□□□□□ -1.18
CDHR3-213ENST00000488386 MAP3K15Q6ZN16 1313 aa7.7□□□□□ -1.18
CDHR3-213ENST00000488386 FER1L6Q2WGJ9 1857 aa7.7□□□□□ -1.18
CDHR3-213ENST00000488386 ARFGEF2Q9Y6D5 1785 aa7.69□□□□□ -1.18
CDHR3-213ENST00000488386 ELL2O00472 640 aaPredicted RBP7.69□□□□□ -1.18
CDHR3-213ENST00000488386 TNFRSF10BO14763 440 aa7.69□□□□□ -1.18
CDHR3-213ENST00000488386 TCERG1O14776 1098 aaKnown RBP7.69□□□□□ -1.18
CDHR3-213ENST00000488386 ATXN7O15265 892 aaPredicted RBP7.69□□□□□ -1.18
CDHR3-213ENST00000488386 SRGNP10124 158 aa7.69□□□□□ -1.18
CDHR3-213ENST00000488386 LMOD3Q0VAK6 560 aa7.69□□□□□ -1.18
CDHR3-213ENST00000488386 GRIN2CQ14957 1233 aa7.69□□□□□ -1.18
CDHR3-213ENST00000488386 SAMD5Q5TGI4 173 aa7.69□□□□□ -1.18
CDHR3-213ENST00000488386 PRPF40BQ6NWY9 871 aaKnown RBP7.69□□□□□ -1.18
CDHR3-213ENST00000488386 CLEC4GQ6UXB4 293 aa7.69□□□□□ -1.18
CDHR3-213ENST00000488386 XAGE3Q8WTP9 111 aa7.69□□□□□ -1.18
CDHR3-213ENST00000488386 COL26A1Q96A83 441 aa7.69□□□□□ -1.18
CDHR3-213ENST00000488386 MASTLQ96GX5 879 aa7.69□□□□□ -1.18
CDHR3-213ENST00000488386 RRAGCQ9HB90 399 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms