RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 ZSCAN22P10073 491 aaPredicted RBP7.18□□□□□ -1.26
SIK3-212ENST00000488337 ATP4AP20648 1035 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 FLT3P36888 993 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 PSMC4P43686 418 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 CDR1P51861 262 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 CCNG1P51959 295 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 HDAC4P56524 1084 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 XRCC4Q13426 336 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 KIF4BQ2VIQ3 1234 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 Q4G0T1 1027 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 EMC10Q5UCC4 262 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 TMEM110Q86TL2 294 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 DRC7Q8IY82 874 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 IGSF22Q8N9C0 903 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 CCDC150Q8NCX0 1101 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 SPAG5Q96R06 1193 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 USP16Q9Y5T5 823 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 CEP152O94986 1710 aa7.18□□□□□ -1.26
SIK3-212ENST00000488337 IFIT2P09913 472 aaKnown RBP7.17□□□□□ -1.26
SIK3-212ENST00000488337 SKOR1P84550 965 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 SLC4A8Q2Y0W8 1093 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 SIRT2Q8IXJ6 389 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 C8orf58Q8NAV2 365 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 ERMNQ8TAM6 284 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 SYTL4Q96C24 671 aaPredicted RBP7.17□□□□□ -1.26
SIK3-212ENST00000488337 COG3Q96JB2 828 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 SCLT1Q96NL6 688 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 TRIM4Q9C037 500 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 EHD4Q9H223 541 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 MYO1AQ9UBC5 1043 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.17□□□□□ -1.26
SIK3-212ENST00000488337 TTC21AQ8NDW8 1320 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 ADGRL3Q9HAR2 1447 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 EIF3FO00303 357 aaPredicted RBP7.17□□□□□ -1.26
SIK3-212ENST00000488337 NPTXRO95502 500 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 HOXD10P28358 340 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 USP11P51784 963 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 IDI1Q13907 227 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 DCTN1Q14203 1278 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 WDR93Q6P2C0 686 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 B4GALNT4Q76KP1 1039 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 L3MBTL3Q96JM7 780 aaPredicted RBP7.17□□□□□ -1.26
SIK3-212ENST00000488337 OXCT2Q9BYC2 517 aaPredicted RBP7.17□□□□□ -1.26
SIK3-212ENST00000488337 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.17□□□□□ -1.26
SIK3-212ENST00000488337 ABCA6Q8N139 1617 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 VIL1P09327 827 aaKnown RBP7.17□□□□□ -1.26
SIK3-212ENST00000488337 IDO1P14902 403 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 CEBPAP49715 358 aaPredicted RBP7.17□□□□□ -1.26
SIK3-212ENST00000488337 CUL3Q13618 768 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 CCDC57Q2TAC2 916 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 SMUG1Q53HV7 270 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 GALNT17Q6IS24 598 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 DHX40Q8IX18 779 aaKnown RBP7.17□□□□□ -1.26
SIK3-212ENST00000488337 NUP133Q8WUM0 1156 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 NSMCE1Q8WV22 266 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 NACC2Q96BF6 587 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 OCEL1Q9H607 264 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 MIS18AQ9NYP9 233 aa7.17□□□□□ -1.26
SIK3-212ENST00000488337 MAP3K4Q9Y6R4 1608 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 ABLIM1O14639 778 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 PACS1Q6VY07 963 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 TMC6Q7Z403 805 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 FCHSD1Q86WN1 690 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 ANKRD44Q8N8A2 993 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 YIPF3Q9GZM5 350 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 ZNF219Q9P2Y4 722 aaPredicted RBP7.16□□□□□ -1.26
SIK3-212ENST00000488337 POTEB2H3BUK9 544 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 ATP9BO43861 1147 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 ADCY1Q08828 1119 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 ME3Q16798 604 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 APBB1IPQ7Z5R6 666 aaPredicted RBP7.16□□□□□ -1.26
SIK3-212ENST00000488337 SLF2Q8IX21 1173 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 EMILIN1Q9Y6C2 1016 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 ADCY9O60503 1353 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 KRT38O76015 456 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 ALADP13716 330 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 IFFO1Q0D2I5 559 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 PPFIA1Q13136 1202 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 RIPK1Q13546 671 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 PCDH18Q9HCL0 1135 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 HPCAL4Q9UM19 191 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 SPHKAPQ2M3C7 1700 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 BCL9O00512 1426 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 SSH2Q76I76 1423 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 FAM83GA6ND36 823 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 DCAF8L1A6NGE4 600 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 TPPPO94811 219 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 F13A1P00488 732 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 YY1P25490 414 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 PDE6BP35913 854 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 PLOD1Q02809 727 aaPredicted RBP7.16□□□□□ -1.26
SIK3-212ENST00000488337 GORABQ5T7V8 394 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 TMEM139Q8IV31 216 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 BCAS4Q8TDM0 211 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 OTUD7AQ8TE49 926 aaPredicted RBP7.16□□□□□ -1.26
SIK3-212ENST00000488337 CLSTN2Q9H4D0 955 aa7.16□□□□□ -1.26
SIK3-212ENST00000488337 KIAA1522Q9P206 1035 aaPredicted RBP7.16□□□□□ -1.26
SIK3-212ENST00000488337 KIF5CO60282 957 aa7.15□□□□□ -1.26
SIK3-212ENST00000488337 NAT2P11245 290 aa7.15□□□□□ -1.26
SIK3-212ENST00000488337 GBP2P32456 591 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms