RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 SLC4A8Q2Y0W8 1093 aa13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 GPAT2Q6NUI2 795 aa13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 C17orf99Q6UX52 265 aa13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 ANTXR1Q9H6X2 564 aa13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 ZCCHC17Q9NP64 241 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 AFG3L2Q9Y4W6 797 aa13.82□□□□□ -0.2
NIPAL3-207ENST00000488155 CYP7A1P22680 504 aa13.81□□□□□ -0.2
NIPAL3-207ENST00000488155 CTGFP29279 349 aa13.81□□□□□ -0.2
NIPAL3-207ENST00000488155 RRP1BQ14684 758 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-207ENST00000488155 ARHGEF6Q15052 776 aa13.81□□□□□ -0.2
NIPAL3-207ENST00000488155 ERC1Q8IUD2 1116 aa13.81□□□□□ -0.2
NIPAL3-207ENST00000488155 MIGA1Q8NAN2 632 aa13.81□□□□□ -0.2
NIPAL3-207ENST00000488155 RHPN1Q8TCX5 695 aa13.81□□□□□ -0.2
NIPAL3-207ENST00000488155 SAP30BPQ9UHR5 308 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-207ENST00000488155 DDX19BQ9UMR2 479 aa13.81□□□□□ -0.2
NIPAL3-207ENST00000488155 A0A0G2JLL6 359 aaPredicted RBP13.8□□□□□ -0.2
NIPAL3-207ENST00000488155 TBC1D12O60347 775 aa13.8□□□□□ -0.2
NIPAL3-207ENST00000488155 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
NIPAL3-207ENST00000488155 MAP4K4O95819 1239 aaPredicted RBP13.8□□□□□ -0.2
NIPAL3-207ENST00000488155 PSMC4P43686 418 aa13.8□□□□□ -0.2
NIPAL3-207ENST00000488155 SLC9C1Q4G0N8 1177 aa13.8□□□□□ -0.2
NIPAL3-207ENST00000488155 C20orf194Q5TEA3 1177 aa13.8□□□□□ -0.2
NIPAL3-207ENST00000488155 PRRT2Q7Z6L0 340 aaPredicted RBP13.8□□□□□ -0.2
NIPAL3-207ENST00000488155 MAGEB6Q8N7X4 407 aa13.8□□□□□ -0.2
NIPAL3-207ENST00000488155 ZNF512BQ96KM6 892 aaPredicted RBP13.8□□□□□ -0.2
NIPAL3-207ENST00000488155 PALD1Q9ULE6 856 aa13.8□□□□□ -0.2
NIPAL3-207ENST00000488155 NAV1Q8NEY1 1877 aa13.8□□□□□ -0.2
NIPAL3-207ENST00000488155 BRCA2P51587 3418 aa13.79□□□□□ -0.2
NIPAL3-207ENST00000488155 LOC285556D6RIA3 1793 aa13.79□□□□□ -0.2
NIPAL3-207ENST00000488155 FMNL1O95466 1100 aaPredicted RBP13.79□□□□□ -0.2
NIPAL3-207ENST00000488155 PLCG2P16885 1265 aa13.79□□□□□ -0.2
NIPAL3-207ENST00000488155 PPP4CP60510 307 aa13.79□□□□□ -0.2
NIPAL3-207ENST00000488155 SPP2Q13103 211 aa13.79□□□□□ -0.2
NIPAL3-207ENST00000488155 FASTKD5Q7L8L6 764 aaKnown RBP13.79□□□□□ -0.2
NIPAL3-207ENST00000488155 SIRT2Q8IXJ6 389 aa13.79□□□□□ -0.2
NIPAL3-207ENST00000488155 SH3TC2Q8TF17 1288 aa13.79□□□□□ -0.2
NIPAL3-207ENST00000488155 ARMC5Q96C12 935 aa13.79□□□□□ -0.2
NIPAL3-207ENST00000488155 PARK7Q99497 189 aaKnown RBP13.79□□□□□ -0.2
NIPAL3-207ENST00000488155 ZBTB40Q9NUA8 1239 aa13.79□□□□□ -0.2
NIPAL3-207ENST00000488155 ADGRA2Q96PE1 1338 aa13.79□□□□□ -0.2
NIPAL3-207ENST00000488155 MKI67P46013 3256 aaKnown RBP13.78□□□□□ -0.2
NIPAL3-207ENST00000488155 EN2P19622 333 aaPredicted RBP13.78□□□□□ -0.2
NIPAL3-207ENST00000488155 CAP2P40123 477 aa13.78□□□□□ -0.2
NIPAL3-207ENST00000488155 HSP90AB4PQ58FF6 505 aa13.78□□□□□ -0.2
NIPAL3-207ENST00000488155 RPAP2Q8IXW5 612 aaPredicted RBP13.78□□□□□ -0.2
NIPAL3-207ENST00000488155 TRIM47Q96LD4 638 aa13.78□□□□□ -0.2
NIPAL3-207ENST00000488155 TRIM34Q9BYJ4 488 aa13.78□□□□□ -0.2
NIPAL3-207ENST00000488155 PI4KBQ9UBF8 816 aa13.78□□□□□ -0.2
NIPAL3-207ENST00000488155 FLT1P17948 1338 aa13.78□□□□□ -0.2
NIPAL3-207ENST00000488155 COL2A1P02458 1487 aaPredicted RBP13.78□□□□□ -0.2
NIPAL3-207ENST00000488155 HMMRO75330 724 aa13.77□□□□□ -0.21
NIPAL3-207ENST00000488155 GDF11O95390 407 aa13.77□□□□□ -0.21
NIPAL3-207ENST00000488155 IFIT2P09913 472 aaKnown RBP13.77□□□□□ -0.21
NIPAL3-207ENST00000488155 OSBPP22059 807 aa13.77□□□□□ -0.21
NIPAL3-207ENST00000488155 USP5P45974 858 aa13.77□□□□□ -0.21
NIPAL3-207ENST00000488155 HMGCS2P54868 508 aa13.77□□□□□ -0.21
NIPAL3-207ENST00000488155 SHROOM1Q2M3G4 852 aaPredicted RBP13.77□□□□□ -0.21
NIPAL3-207ENST00000488155 TREML2Q5T2D2 321 aa13.77□□□□□ -0.21
NIPAL3-207ENST00000488155 NBPF11Q86T75 865 aa13.77□□□□□ -0.21
NIPAL3-207ENST00000488155 CLASRPQ8N2M8 674 aaKnown RBP13.77□□□□□ -0.21
NIPAL3-207ENST00000488155 CRACR2BQ8N4Y2 399 aaPredicted RBP13.77□□□□□ -0.21
NIPAL3-207ENST00000488155 KIF1BPQ96EK5 621 aa13.77□□□□□ -0.21
NIPAL3-207ENST00000488155 ZNF333Q96JL9 665 aa13.77□□□□□ -0.21
NIPAL3-207ENST00000488155 TMEM106CQ9BVX2 250 aa13.77□□□□□ -0.21
NIPAL3-207ENST00000488155 BCRP11274 1271 aa13.76□□□□□ -0.21
NIPAL3-207ENST00000488155 JAG1P78504 1218 aa13.76□□□□□ -0.21
NIPAL3-207ENST00000488155 MAP3K12Q12852 859 aa13.76□□□□□ -0.21
NIPAL3-207ENST00000488155 ZNF280CQ8ND82 737 aa13.76□□□□□ -0.21
NIPAL3-207ENST00000488155 SMCR8Q8TEV9 937 aaPredicted RBP13.76□□□□□ -0.21
NIPAL3-207ENST00000488155 DNAJC2Q99543 621 aaKnown RBP13.76□□□□□ -0.21
NIPAL3-207ENST00000488155 DHX36Q9H2U1 1008 aaKnown RBP13.76□□□□□ -0.21
NIPAL3-207ENST00000488155 DNAJC18Q9H819 358 aa13.76□□□□□ -0.21
NIPAL3-207ENST00000488155 SRRDQ9UH36 339 aa13.76□□□□□ -0.21
NIPAL3-207ENST00000488155 HERC5Q9UII4 1024 aaKnown RBP13.76□□□□□ -0.21
NIPAL3-207ENST00000488155 MYPNQ86TC9 1320 aa13.75□□□□□ -0.21
NIPAL3-207ENST00000488155 USP17L5A8MUK1 530 aa13.75□□□□□ -0.21
NIPAL3-207ENST00000488155 GOLIM4O00461 696 aa13.75□□□□□ -0.21
NIPAL3-207ENST00000488155 HLA-DOAP06340 250 aa13.75□□□□□ -0.21
NIPAL3-207ENST00000488155 ANKRD13CQ8N6S4 541 aa13.75□□□□□ -0.21
NIPAL3-207ENST00000488155 RAET1EQ8TD07 263 aa13.75□□□□□ -0.21
NIPAL3-207ENST00000488155 EDC3Q96F86 508 aaKnown RBP13.75□□□□□ -0.21
NIPAL3-207ENST00000488155 GABRQQ9UN88 632 aa13.75□□□□□ -0.21
NIPAL3-207ENST00000488155 AGTPBP1Q9UPW5 1226 aa13.75□□□□□ -0.21
NIPAL3-207ENST00000488155 SMARCA5O60264 1052 aaPredicted RBP13.74□□□□□ -0.21
NIPAL3-207ENST00000488155 GNRH1P01148 92 aa13.74□□□□□ -0.21
NIPAL3-207ENST00000488155 HOXD10P28358 340 aa13.74□□□□□ -0.21
NIPAL3-207ENST00000488155 FCGRTP55899 365 aa13.74□□□□□ -0.21
NIPAL3-207ENST00000488155 FOXP4Q8IVH2 680 aaPredicted RBP13.74□□□□□ -0.21
NIPAL3-207ENST00000488155 BOLA2Q9H3K6 86 aa13.74□□□□□ -0.21
NIPAL3-207ENST00000488155 AS3MTQ9HBK9 375 aa13.74□□□□□ -0.21
NIPAL3-207ENST00000488155 CEP290O15078 2479 aa13.74□□□□□ -0.21
NIPAL3-207ENST00000488155 RAB11FIP3O75154 756 aa13.73□□□□□ -0.21
NIPAL3-207ENST00000488155 PDE6AP16499 860 aa13.73□□□□□ -0.21
NIPAL3-207ENST00000488155 PRMT2P55345 433 aa13.73□□□□□ -0.21
NIPAL3-207ENST00000488155 PRKCZQ05513 592 aa13.73□□□□□ -0.21
NIPAL3-207ENST00000488155 MTMR2Q13614 643 aa13.73□□□□□ -0.21
NIPAL3-207ENST00000488155 MTFR1Q15390 333 aa13.73□□□□□ -0.21
NIPAL3-207ENST00000488155 SLFNL1Q499Z3 407 aa13.73□□□□□ -0.21
NIPAL3-207ENST00000488155 SLC9C2Q5TAH2 1124 aa13.73□□□□□ -0.21
NIPAL3-207ENST00000488155 PROCA1Q8NCQ7 364 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms