RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, human

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF38-208	ENST00000488058	KCNH4	Q9UQ05	1017 aa		28.78	■■■□□ 2.2
RNF38-208	ENST00000488058	ZHX2	Q9Y6X8	837 aa		28.78	■■■□□ 2.2
RNF38-208	ENST00000488058	SIPA1L1	O43166	1804 aa		28.78	■■■□□ 2.2
RNF38-208	ENST00000488058	PTPRA	P18433	802 aa		28.77	■■■□□ 2.2
RNF38-208	ENST00000488058	CERS3	Q8IU89	383 aa		28.77	■■■□□ 2.2
RNF38-208	ENST00000488058	TRIM34	Q9BYJ4	488 aa		28.77	■■■□□ 2.2
RNF38-208	ENST00000488058	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	28.77	■■■□□ 2.2
RNF38-208	ENST00000488058	ATAD5	Q96QE3	1844 aa		28.77	■■■□□ 2.2
RNF38-208	ENST00000488058	MYH1	P12882	1939 aa		28.77	■■■□□ 2.2
RNF38-208	ENST00000488058	MAGEB6P1	A0A0J9YX57	407 aa		28.76	■■■□□ 2.19
RNF38-208	ENST00000488058	TMED8	Q6PL24	325 aa	Predicted RBP	28.76	■■■□□ 2.19
RNF38-208	ENST00000488058	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	28.76	■■■□□ 2.19
RNF38-208	ENST00000488058	HAUS7	Q99871	368 aa		28.76	■■■□□ 2.19
RNF38-208	ENST00000488058	HERC5	Q9UII4	1024 aa	Known RBP	28.76	■■■□□ 2.19
RNF38-208	ENST00000488058	ZNF532	Q9HCE3	1301 aa		28.75	■■■□□ 2.19
RNF38-208	ENST00000488058	CCDC84	Q86UT8	332 aa	Predicted RBP	28.75	■■■□□ 2.19
RNF38-208	ENST00000488058	HLA-DOA	P06340	250 aa		28.74	■■■□□ 2.19
RNF38-208	ENST00000488058	ECHDC1	Q9NTX5	307 aa		28.74	■■■□□ 2.19
RNF38-208	ENST00000488058	CXCL11	O14625	94 aa		28.73	■■■□□ 2.19
RNF38-208	ENST00000488058	CD99L2	Q8TCZ2	262 aa		28.73	■■■□□ 2.19
RNF38-208	ENST00000488058	ERO1A	Q96HE7	468 aa		28.73	■■■□□ 2.19
RNF38-208	ENST00000488058	GPATCH3	Q96I76	525 aa		28.73	■■■□□ 2.19
RNF38-208	ENST00000488058	PHIP	Q8WWQ0	1821 aa		28.73	■■■□□ 2.19
RNF38-208	ENST00000488058	SP3	Q02447	781 aa		28.72	■■■□□ 2.19
RNF38-208	ENST00000488058	ANKRD23	Q86SG2	305 aa		28.72	■■■□□ 2.19
RNF38-208	ENST00000488058	RIOK1	Q9BRS2	568 aa	Known RBP	28.72	■■■□□ 2.19
RNF38-208	ENST00000488058	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	28.72	■■■□□ 2.19
RNF38-208	ENST00000488058	ZCCHC17	Q9NP64	241 aa	Known RBP	28.72	■■■□□ 2.19
RNF38-208	ENST00000488058	AFG3L2	Q9Y4W6	797 aa		28.72	■■■□□ 2.19
RNF38-208	ENST00000488058	MYH7	P12883	1935 aa		28.71	■■■□□ 2.19
RNF38-208	ENST00000488058	TRIM75P	A6NK02	468 aa		28.71	■■■□□ 2.19
RNF38-208	ENST00000488058	PDHX	O00330	501 aa		28.71	■■■□□ 2.19
RNF38-208	ENST00000488058	CAP2	P40123	477 aa		28.71	■■■□□ 2.19
RNF38-208	ENST00000488058	RRP1B	Q14684	758 aa	Known RBP	28.71	■■■□□ 2.19
RNF38-208	ENST00000488058	TSHZ3	Q63HK5	1081 aa		28.71	■■■□□ 2.19
RNF38-208	ENST00000488058	GADL1	Q6ZQY3	521 aa		28.71	■■■□□ 2.19
RNF38-208	ENST00000488058	FOXP4	Q8IVH2	680 aa	Predicted RBP	28.71	■■■□□ 2.19
RNF38-208	ENST00000488058	TRIM17	Q9Y577	477 aa		28.71	■■■□□ 2.19
RNF38-208	ENST00000488058	NAV1	Q8NEY1	1877 aa		28.71	■■■□□ 2.19
RNF38-208	ENST00000488058	TCRBV5S4A2T	A0A5A2	114 aa		28.7	■■■□□ 2.18
RNF38-208	ENST00000488058	PKN2	Q16513	984 aa	Known RBP	28.7	■■■□□ 2.18
RNF38-208	ENST00000488058	SLFNL1	Q499Z3	407 aa		28.7	■■■□□ 2.18
RNF38-208	ENST00000488058	CRNKL1	Q9BZJ0	848 aa	Known RBP	28.7	■■■□□ 2.18
RNF38-208	ENST00000488058	PTPRF	P10586	1907 aa		28.69	■■■□□ 2.18
RNF38-208	ENST00000488058	ADD2	P35612	726 aa		28.69	■■■□□ 2.18
RNF38-208	ENST00000488058	MOGS	Q13724	837 aa		28.69	■■■□□ 2.18
RNF38-208	ENST00000488058	DNAJC18	Q9H819	358 aa		28.69	■■■□□ 2.18
RNF38-208	ENST00000488058		A0A0G2JLL6	359 aa	Predicted RBP	28.68	■■■□□ 2.18
RNF38-208	ENST00000488058	TLR2	O60603	784 aa		28.68	■■■□□ 2.18
RNF38-208	ENST00000488058	FASTKD5	Q7L8L6	764 aa	Known RBP	28.68	■■■□□ 2.18
RNF38-208	ENST00000488058	PRRT2	Q7Z6L0	340 aa	Predicted RBP	28.68	■■■□□ 2.18
RNF38-208	ENST00000488058	LCORL	Q8N3X6	602 aa		28.68	■■■□□ 2.18
RNF38-208	ENST00000488058	GDF11	O95390	407 aa		28.67	■■■□□ 2.18
RNF38-208	ENST00000488058	ARMT1	Q9H993	441 aa		28.67	■■■□□ 2.18
RNF38-208	ENST00000488058	ZBTB47	Q9UFB7	747 aa	Predicted RBP	28.67	■■■□□ 2.18
RNF38-208	ENST00000488058	HPS5	Q9UPZ3	1129 aa		28.67	■■■□□ 2.18
RNF38-208	ENST00000488058	FBXO46	Q6PJ61	603 aa	Predicted RBP	28.66	■■■□□ 2.18
RNF38-208	ENST00000488058	OTOP1	Q7RTM1	612 aa		28.66	■■■□□ 2.18
RNF38-208	ENST00000488058	TTC6	Q86TZ1	520 aa		28.66	■■■□□ 2.18
RNF38-208	ENST00000488058	USP17L5	A8MUK1	530 aa		28.65	■■■□□ 2.18
RNF38-208	ENST00000488058	MBD4	O95243	580 aa		28.65	■■■□□ 2.18
RNF38-208	ENST00000488058	CHGB	P05060	677 aa		28.65	■■■□□ 2.18
RNF38-208	ENST00000488058	POLR3D	P05423	398 aa	Predicted RBP	28.65	■■■□□ 2.18
RNF38-208	ENST00000488058	SPP2	Q13103	211 aa		28.65	■■■□□ 2.18
RNF38-208	ENST00000488058	ZSCAN25	Q6NSZ9	544 aa		28.65	■■■□□ 2.18
RNF38-208	ENST00000488058	GPAT2	Q6NUI2	795 aa		28.65	■■■□□ 2.18
RNF38-208	ENST00000488058	SDR42E1	Q8WUS8	393 aa		28.65	■■■□□ 2.18
RNF38-208	ENST00000488058	EFCC1	Q9HA90	598 aa		28.65	■■■□□ 2.18
RNF38-208	ENST00000488058	CPA4	Q9UI42	421 aa		28.65	■■■□□ 2.18
RNF38-208	ENST00000488058	DDX60L	Q5H9U9	1706 aa	Known RBP	28.65	■■■□□ 2.18
RNF38-208	ENST00000488058	ECM2	O94769	699 aa	Predicted RBP	28.64	■■■□□ 2.18
RNF38-208	ENST00000488058	METTL16	Q86W50	562 aa	Known RBP	28.64	■■■□□ 2.18
RNF38-208	ENST00000488058	ZNF280C	Q8ND82	737 aa		28.64	■■■□□ 2.18
RNF38-208	ENST00000488058	PARK7	Q99497	189 aa	Known RBP	28.64	■■■□□ 2.18
RNF38-208	ENST00000488058	AS3MT	Q9HBK9	375 aa		28.64	■■■□□ 2.18
RNF38-208	ENST00000488058	MCM9	Q9NXL9	1143 aa		28.64	■■■□□ 2.18
RNF38-208	ENST00000488058	SERPINB13	Q9UIV8	391 aa		28.64	■■■□□ 2.18
RNF38-208	ENST00000488058	ASNS	P08243	561 aa		28.63	■■■□□ 2.17
RNF38-208	ENST00000488058	SHROOM1	Q2M3G4	852 aa	Predicted RBP	28.63	■■■□□ 2.17
RNF38-208	ENST00000488058	ANKRD45	Q5TZF3	282 aa		28.63	■■■□□ 2.17
RNF38-208	ENST00000488058	TBC1D2	Q9BYX2	928 aa		28.63	■■■□□ 2.17
RNF38-208	ENST00000488058	CYP2C8	P10632	490 aa		28.62	■■■□□ 2.17
RNF38-208	ENST00000488058	JAG1	P78504	1218 aa		28.62	■■■□□ 2.17
RNF38-208	ENST00000488058	UBE3C	Q15386	1083 aa		28.62	■■■□□ 2.17
RNF38-208	ENST00000488058	OTUD7A	Q8TE49	926 aa	Predicted RBP	28.62	■■■□□ 2.17
RNF38-208	ENST00000488058	ZSWIM8	A7E2V4	1837 aa		28.62	■■■□□ 2.17
RNF38-208	ENST00000488058	PLCD1	P51178	756 aa		28.61	■■■□□ 2.17
RNF38-208	ENST00000488058	CAP1	Q01518	475 aa		28.61	■■■□□ 2.17
RNF38-208	ENST00000488058	KIF22	Q14807	665 aa		28.61	■■■□□ 2.17
RNF38-208	ENST00000488058	EHD4	Q9H223	541 aa		28.61	■■■□□ 2.17
RNF38-208	ENST00000488058	ZBTB21	Q9ULJ3	1066 aa		28.61	■■■□□ 2.17
RNF38-208	ENST00000488058	SUPT16H	Q9Y5B9	1047 aa	Known RBP	28.61	■■■□□ 2.17
RNF38-208	ENST00000488058	PRKAB2	O43741	272 aa		28.6	■■■□□ 2.17
RNF38-208	ENST00000488058	HMGCS2	P54868	508 aa		28.6	■■■□□ 2.17
RNF38-208	ENST00000488058	HDAC1	Q13547	482 aa	Predicted RBP	28.6	■■■□□ 2.17
RNF38-208	ENST00000488058	ARHGEF6	Q15052	776 aa		28.6	■■■□□ 2.17
RNF38-208	ENST00000488058	C17orf99	Q6UX52	265 aa		28.6	■■■□□ 2.17
RNF38-208	ENST00000488058	EXOC6	Q8TAG9	804 aa		28.6	■■■□□ 2.17
RNF38-208	ENST00000488058	GCC1	Q96CN9	775 aa		28.6	■■■□□ 2.17
RNF38-208	ENST00000488058	DCP1A	Q9NPI6	582 aa	Predicted RBP	28.6	■■■□□ 2.17

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