RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 SCYL3Q8IZE3 742 aa11.27□□□□□ -0.61
LCN2-205ENST00000487719 KBTBD3Q8NAB2 608 aa11.27□□□□□ -0.61
LCN2-205ENST00000487719 ZKSCAN4Q969J2 545 aaPredicted RBP11.27□□□□□ -0.61
LCN2-205ENST00000487719 TBC1D2Q9BYX2 928 aa11.27□□□□□ -0.61
LCN2-205ENST00000487719 LNPKQ9C0E8 428 aa11.27□□□□□ -0.61
LCN2-205ENST00000487719 MBD4O95243 580 aa11.26□□□□□ -0.61
LCN2-205ENST00000487719 HSPA8P11142 646 aaKnown RBP11.26□□□□□ -0.61
LCN2-205ENST00000487719 LBX1P52954 281 aa11.26□□□□□ -0.61
LCN2-205ENST00000487719 TSHZ3Q63HK5 1081 aa11.26□□□□□ -0.61
LCN2-205ENST00000487719 CHD1LQ86WJ1 897 aa11.26□□□□□ -0.61
LCN2-205ENST00000487719 EDC3Q96F86 508 aaKnown RBP11.26□□□□□ -0.61
LCN2-205ENST00000487719 ZIC5Q96T25 663 aa11.26□□□□□ -0.61
LCN2-205ENST00000487719 ATP8A2Q9NTI2 1148 aa11.26□□□□□ -0.61
LCN2-205ENST00000487719 RNF186Q9NXI6 227 aa11.26□□□□□ -0.61
LCN2-205ENST00000487719 SAP30BPQ9UHR5 308 aaKnown RBP11.26□□□□□ -0.61
LCN2-205ENST00000487719 ZNF112Q9UJU3 913 aa11.26□□□□□ -0.61
LCN2-205ENST00000487719 SNCAIPQ9Y6H5 919 aa11.26□□□□□ -0.61
LCN2-205ENST00000487719 CCL15-CCL14A0A0B4J2E2 113 aa11.25□□□□□ -0.61
LCN2-205ENST00000487719 RNF113AO15541 343 aaKnown RBP11.25□□□□□ -0.61
LCN2-205ENST00000487719 GNAT2P19087 354 aa11.25□□□□□ -0.61
LCN2-205ENST00000487719 INPP5BP32019 993 aa11.25□□□□□ -0.61
LCN2-205ENST00000487719 NUCB1Q02818 461 aa11.25□□□□□ -0.61
LCN2-205ENST00000487719 CCL15Q16663 113 aa11.25□□□□□ -0.61
LCN2-205ENST00000487719 APPBP2Q92624 585 aa11.25□□□□□ -0.61
LCN2-205ENST00000487719 EVI5LQ96CN4 794 aa11.25□□□□□ -0.61
LCN2-205ENST00000487719 RIOK1Q9BRS2 568 aaKnown RBP11.25□□□□□ -0.61
LCN2-205ENST00000487719 AS3MTQ9HBK9 375 aa11.25□□□□□ -0.61
LCN2-205ENST00000487719 GINM1Q9NU53 330 aa11.25□□□□□ -0.61
LCN2-205ENST00000487719 MCM9Q9NXL9 1143 aa11.25□□□□□ -0.61
LCN2-205ENST00000487719 SERPINB13Q9UIV8 391 aa11.25□□□□□ -0.61
LCN2-205ENST00000487719 TAOK2Q9UL54 1235 aa11.25□□□□□ -0.61
LCN2-205ENST00000487719 PALD1Q9ULE6 856 aa11.25□□□□□ -0.61
LCN2-205ENST00000487719 TCRBV5S4A2TA0A5A2 114 aa11.24□□□□□ -0.61
LCN2-205ENST00000487719 TRIM6-TRIM34B2RNG4 842 aa11.24□□□□□ -0.61
LCN2-205ENST00000487719 ASNSP08243 561 aa11.24□□□□□ -0.61
LCN2-205ENST00000487719 PDE1AP54750 535 aa11.24□□□□□ -0.61
LCN2-205ENST00000487719 MAP3K10Q02779 954 aa11.24□□□□□ -0.61
LCN2-205ENST00000487719 SH3BP5LQ7L8J4 393 aa11.24□□□□□ -0.61
LCN2-205ENST00000487719 TICAM2Q86XR7 235 aa11.24□□□□□ -0.61
LCN2-205ENST00000487719 IFNL1Q8IU54 200 aa11.24□□□□□ -0.61
LCN2-205ENST00000487719 LCORLQ8N3X6 602 aa11.24□□□□□ -0.61
LCN2-205ENST00000487719 PI4K2BQ8TCG2 481 aa11.24□□□□□ -0.61
LCN2-205ENST00000487719 NACAP1Q9BZK3 213 aa11.24□□□□□ -0.61
LCN2-205ENST00000487719 EHD4Q9H223 541 aa11.24□□□□□ -0.61
LCN2-205ENST00000487719 ARMT1Q9H993 441 aa11.24□□□□□ -0.61
LCN2-205ENST00000487719 STAP2Q9UGK3 403 aa11.24□□□□□ -0.61
LCN2-205ENST00000487719 TSKSQ9UJT2 592 aa11.24□□□□□ -0.61
LCN2-205ENST00000487719 SLC4A4Q9Y6R1 1079 aa11.24□□□□□ -0.61
LCN2-205ENST00000487719 MYH4Q9Y623 1939 aa11.23□□□□□ -0.61
LCN2-205ENST00000487719 PHF20L1A8MW92 1017 aa11.23□□□□□ -0.61
LCN2-205ENST00000487719 CXCL11O14625 94 aa11.23□□□□□ -0.61
LCN2-205ENST00000487719 IRF6O14896 467 aa11.23□□□□□ -0.61
LCN2-205ENST00000487719 TAF1CQ15572 869 aaPredicted RBP11.23□□□□□ -0.61
LCN2-205ENST00000487719 SLC4A8Q2Y0W8 1093 aa11.23□□□□□ -0.61
LCN2-205ENST00000487719 FASTKD5Q7L8L6 764 aaKnown RBP11.23□□□□□ -0.61
LCN2-205ENST00000487719 ZFYVE28Q9HCC9 887 aa11.23□□□□□ -0.61
LCN2-205ENST00000487719 ZCCHC17Q9NP64 241 aaKnown RBP11.23□□□□□ -0.61
LCN2-205ENST00000487719 CABP5Q9NP86 173 aa11.23□□□□□ -0.61
LCN2-205ENST00000487719 ZHX2Q9Y6X8 837 aa11.23□□□□□ -0.61
LCN2-205ENST00000487719 LOC285556D6RIA3 1793 aa11.23□□□□□ -0.61
LCN2-205ENST00000487719 MGAMO43451 1857 aa11.23□□□□□ -0.61
LCN2-205ENST00000487719 FAM196BA6NMK8 535 aa11.22□□□□□ -0.61
LCN2-205ENST00000487719 USP17L5A8MUK1 530 aa11.22□□□□□ -0.61
LCN2-205ENST00000487719 IGHDP01880 384 aa11.22□□□□□ -0.61
LCN2-205ENST00000487719 APPP05067 770 aa11.22□□□□□ -0.61
LCN2-205ENST00000487719 PTPRAP18433 802 aa11.22□□□□□ -0.61
LCN2-205ENST00000487719 GJA5P36382 358 aa11.22□□□□□ -0.61
LCN2-205ENST00000487719 CAP2P40123 477 aa11.22□□□□□ -0.61
LCN2-205ENST00000487719 ARHGEF6Q15052 776 aa11.22□□□□□ -0.61
LCN2-205ENST00000487719 TNS4Q8IZW8 715 aa11.22□□□□□ -0.61
LCN2-205ENST00000487719 OTUD7AQ8TE49 926 aaPredicted RBP11.22□□□□□ -0.61
LCN2-205ENST00000487719 SDR42E1Q8WUS8 393 aa11.22□□□□□ -0.61
LCN2-205ENST00000487719 RILPL2Q969X0 211 aa11.22□□□□□ -0.61
LCN2-205ENST00000487719 ZNF287Q9HBT7 754 aa11.22□□□□□ -0.61
LCN2-205ENST00000487719 DCP1AQ9NPI6 582 aaPredicted RBP11.22□□□□□ -0.61
LCN2-205ENST00000487719 ARPP21Q9UBL0 812 aaPredicted RBP11.22□□□□□ -0.61
LCN2-205ENST00000487719 SWAP70Q9UH65 585 aa11.22□□□□□ -0.61
LCN2-205ENST00000487719 SALL3Q9BXA9 1300 aa11.21□□□□□ -0.61
LCN2-205ENST00000487719 TESPA1A2RU30 521 aaPredicted RBP11.21□□□□□ -0.61
LCN2-205ENST00000487719 TRIM75PA6NK02 468 aa11.21□□□□□ -0.61
LCN2-205ENST00000487719 HIP1O00291 1037 aa11.21□□□□□ -0.61
LCN2-205ENST00000487719 GPAA1O43292 621 aa11.21□□□□□ -0.61
LCN2-205ENST00000487719 SLC3A2P08195 630 aaKnown RBP11.21□□□□□ -0.61
LCN2-205ENST00000487719 TDO2P48775 406 aa11.21□□□□□ -0.61
LCN2-205ENST00000487719 MFAP1P55081 439 aaKnown RBP11.21□□□□□ -0.61
LCN2-205ENST00000487719 PABPC4Q13310 644 aaKnown RBP eCLIP11.21□□□□□ -0.61
LCN2-205ENST00000487719 CERKLQ49MI3 558 aaPredicted RBP11.21□□□□□ -0.61
LCN2-205ENST00000487719 NOM1Q5C9Z4 860 aaKnown RBP11.21□□□□□ -0.61
LCN2-205ENST00000487719 GIMAP6Q6P9H5 292 aa11.21□□□□□ -0.61
LCN2-205ENST00000487719 CNKSR2Q8WXI2 1034 aa11.21□□□□□ -0.61
LCN2-205ENST00000487719 MS4A4AQ96JQ5 239 aa11.21□□□□□ -0.61
LCN2-205ENST00000487719 CFHR5Q9BXR6 569 aa11.21□□□□□ -0.61
LCN2-205ENST00000487719 KCNH4Q9UQ05 1017 aa11.21□□□□□ -0.61
LCN2-205ENST00000487719 IGF2BP3O00425 579 aaKnown RBP eCLIP11.2□□□□□ -0.62
LCN2-205ENST00000487719 FKTNO75072 461 aa11.2□□□□□ -0.62
LCN2-205ENST00000487719 TBC1D8O95759 1140 aa11.2□□□□□ -0.62
LCN2-205ENST00000487719 KIF22Q14807 665 aa11.2□□□□□ -0.62
LCN2-205ENST00000487719 ABCB5Q2M3G0 1257 aa11.2□□□□□ -0.62
LCN2-205ENST00000487719 GADL1Q6ZQY3 521 aa11.2□□□□□ -0.62
LCN2-205ENST00000487719 METTL16Q86W50 562 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms