RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 GNAT3A8MTJ3 354 aa6.66□□□□□ -1.34
HMGB1P36-201ENST00000487709 AFMP43652 599 aa6.66□□□□□ -1.34
HMGB1P36-201ENST00000487709 NKPD1Q17RQ9 610 aa6.66□□□□□ -1.34
HMGB1P36-201ENST00000487709 PPM1JQ5JR12 505 aa6.66□□□□□ -1.34
HMGB1P36-201ENST00000487709 FAM214BQ7L5A3 538 aa6.66□□□□□ -1.34
HMGB1P36-201ENST00000487709 UBE3DQ7Z6J8 389 aa6.66□□□□□ -1.34
HMGB1P36-201ENST00000487709 ANKLE2Q86XL3 938 aa6.66□□□□□ -1.34
HMGB1P36-201ENST00000487709 KIRREL1Q96J84 757 aa6.66□□□□□ -1.34
HMGB1P36-201ENST00000487709 PICK1Q9NRD5 415 aa6.66□□□□□ -1.34
HMGB1P36-201ENST00000487709 GLI1P08151 1106 aa6.65□□□□□ -1.34
HMGB1P36-201ENST00000487709 ZSCAN22P10073 491 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P36-201ENST00000487709 ARNTP27540 789 aa6.65□□□□□ -1.34
HMGB1P36-201ENST00000487709 LILRA6Q6PI73 481 aa6.65□□□□□ -1.34
HMGB1P36-201ENST00000487709 PI16Q6UXB8 463 aa6.65□□□□□ -1.34
HMGB1P36-201ENST00000487709 CARS2Q9HA77 564 aaKnown RBP6.65□□□□□ -1.34
HMGB1P36-201ENST00000487709 CBX8Q9HC52 389 aa6.65□□□□□ -1.34
HMGB1P36-201ENST00000487709 LMCD1Q9NZU5 365 aa6.65□□□□□ -1.34
HMGB1P36-201ENST00000487709 PITPNM2Q9BZ72 1349 aa6.65□□□□□ -1.35
HMGB1P36-201ENST00000487709 IGF2BP3O00425 579 aaKnown RBP eCLIP6.64□□□□□ -1.35
HMGB1P36-201ENST00000487709 MPRIPQ6WCQ1 1025 aa6.64□□□□□ -1.35
HMGB1P36-201ENST00000487709 CYFIP1Q7L576 1253 aa6.64□□□□□ -1.35
HMGB1P36-201ENST00000487709 CSRNP1Q96S65 589 aa6.64□□□□□ -1.35
HMGB1P36-201ENST00000487709 DIRC2Q96SL1 478 aa6.64□□□□□ -1.35
HMGB1P36-201ENST00000487709 AKAP2Q9Y2D5 859 aa6.64□□□□□ -1.35
HMGB1P36-201ENST00000487709 DCDC2CA8MYV0 355 aa6.63□□□□□ -1.35
HMGB1P36-201ENST00000487709 C1QTNF9P0C862 333 aa6.63□□□□□ -1.35
HMGB1P36-201ENST00000487709 CLCN7P51798 805 aa6.63□□□□□ -1.35
HMGB1P36-201ENST00000487709 TMEM67Q5HYA8 995 aa6.63□□□□□ -1.35
HMGB1P36-201ENST00000487709 NFIBO00712 420 aa6.62□□□□□ -1.35
HMGB1P36-201ENST00000487709 IGHA2P01877 340 aa6.62□□□□□ -1.35
HMGB1P36-201ENST00000487709 NME2P22392 152 aa6.62□□□□□ -1.35
HMGB1P36-201ENST00000487709 NTF4P34130 210 aa6.62□□□□□ -1.35
HMGB1P36-201ENST00000487709 EMILIN2Q9BXX0 1053 aa6.62□□□□□ -1.35
HMGB1P36-201ENST00000487709 KRTAP4-5Q9BYR2 181 aa6.62□□□□□ -1.35
HMGB1P36-201ENST00000487709 FOXQ1Q9C009 403 aa6.62□□□□□ -1.35
HMGB1P36-201ENST00000487709 NSUN3Q9H649 340 aaKnown RBP6.62□□□□□ -1.35
HMGB1P36-201ENST00000487709 PRDM5Q9NQX1 630 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P36-201ENST00000487709 NLRP2Q9NX02 1062 aa6.62□□□□□ -1.35
HMGB1P36-201ENST00000487709 PPP4R2Q9NY27 417 aa6.62□□□□□ -1.35
HMGB1P36-201ENST00000487709 NCANO14594 1321 aa6.61□□□□□ -1.35
HMGB1P36-201ENST00000487709 EOMESO95936 686 aa6.61□□□□□ -1.35
HMGB1P36-201ENST00000487709 ZNF252P-AS1Q0IIN9 211 aa6.61□□□□□ -1.35
HMGB1P36-201ENST00000487709 C12orf40Q86WS4 652 aa6.61□□□□□ -1.35
HMGB1P36-201ENST00000487709 CITED4Q96RK1 184 aa6.61□□□□□ -1.35
HMGB1P36-201ENST00000487709 BCO2Q9BYV7 579 aa6.61□□□□□ -1.35
HMGB1P36-201ENST00000487709 ATP13A1Q9HD20 1204 aa6.61□□□□□ -1.35
HMGB1P36-201ENST00000487709 FAM155AB1AL88 458 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P36-201ENST00000487709 PRRG2O14669 202 aa6.6□□□□□ -1.35
HMGB1P36-201ENST00000487709 KRT1P04264 644 aa6.6□□□□□ -1.35
HMGB1P36-201ENST00000487709 CDKAL1Q5VV42 579 aa6.6□□□□□ -1.35
HMGB1P36-201ENST00000487709 CDC37L1Q7L3B6 337 aa6.6□□□□□ -1.35
HMGB1P36-201ENST00000487709 ARMCX6Q7L4S7 300 aa6.6□□□□□ -1.35
HMGB1P36-201ENST00000487709 FBXO15Q8NCQ5 510 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P36-201ENST00000487709 GRIN3AQ8TCU5 1115 aa6.6□□□□□ -1.35
HMGB1P36-201ENST00000487709 HSPA12BQ96MM6 686 aa6.6□□□□□ -1.35
HMGB1P36-201ENST00000487709 KCNK12Q9HB15 430 aa6.6□□□□□ -1.35
HMGB1P36-201ENST00000487709 C19orf73Q9NVV2 129 aa6.6□□□□□ -1.35
HMGB1P36-201ENST00000487709 MAPK8IP1Q9UQF2 711 aa6.6□□□□□ -1.35
HMGB1P36-201ENST00000487709 PRR33A8MZF0 331 aa6.59□□□□□ -1.35
HMGB1P36-201ENST00000487709 B8ZZF3 427 aa6.59□□□□□ -1.35
HMGB1P36-201ENST00000487709 NPIPB6E9PJ23 425 aa6.59□□□□□ -1.35
HMGB1P36-201ENST00000487709 H3BS24 57 aa6.59□□□□□ -1.35
HMGB1P36-201ENST00000487709 XRCC5P13010 732 aaKnown RBP6.59□□□□□ -1.35
HMGB1P36-201ENST00000487709 SIAH1Q8IUQ4 282 aa6.59□□□□□ -1.35
HMGB1P36-201ENST00000487709 GNEQ9Y223 722 aaKnown RBP6.59□□□□□ -1.35
HMGB1P36-201ENST00000487709 CCDC9Q9Y3X0 531 aaKnown RBP6.59□□□□□ -1.35
HMGB1P36-201ENST00000487709 IVNS1ABPQ9Y6Y0 642 aa6.59□□□□□ -1.35
HMGB1P36-201ENST00000487709 ZBTB37Q5TC79 503 aa6.58□□□□□ -1.36
HMGB1P36-201ENST00000487709 LCE5AQ5TCM9 118 aa6.58□□□□□ -1.36
HMGB1P36-201ENST00000487709 NXPE4Q6UWF7 544 aa6.58□□□□□ -1.36
HMGB1P36-201ENST00000487709 DMRTB1Q96MA1 342 aa6.58□□□□□ -1.36
HMGB1P36-201ENST00000487709 SEMA3GQ9NS98 782 aa6.58□□□□□ -1.36
HMGB1P36-201ENST00000487709 PODXL2Q9NZ53 605 aa6.58□□□□□ -1.36
HMGB1P36-201ENST00000487709 TPX2Q9ULW0 747 aaKnown RBP6.58□□□□□ -1.36
HMGB1P36-201ENST00000487709 FANCGO15287 622 aa6.57□□□□□ -1.36
HMGB1P36-201ENST00000487709 GDNFP39905 211 aa6.57□□□□□ -1.36
HMGB1P36-201ENST00000487709 BUD31P41223 144 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P36-201ENST00000487709 TRIM26Q12899 539 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P36-201ENST00000487709 TMCO4Q5TGY1 634 aa6.57□□□□□ -1.36
HMGB1P36-201ENST00000487709 TPTE2Q6XPS3 522 aa6.57□□□□□ -1.36
HMGB1P36-201ENST00000487709 TTLL10Q6ZVT0 673 aa6.57□□□□□ -1.36
HMGB1P36-201ENST00000487709 MFSD4AQ8N468 514 aa6.57□□□□□ -1.36
HMGB1P36-201ENST00000487709 CACNA2D2Q9NY47 1150 aa6.57□□□□□ -1.36
HMGB1P36-201ENST00000487709 PCDHA4Q9UN74 947 aa6.57□□□□□ -1.36
HMGB1P36-201ENST00000487709 PAGE1O75459 146 aa6.56□□□□□ -1.36
HMGB1P36-201ENST00000487709 SLITRK5O94991 958 aa6.56□□□□□ -1.36
HMGB1P36-201ENST00000487709 TMEM253P0C7T8 217 aa6.56□□□□□ -1.36
HMGB1P36-201ENST00000487709 FGD1P98174 961 aa6.56□□□□□ -1.36
HMGB1P36-201ENST00000487709 NPAS4Q8IUM7 802 aa6.56□□□□□ -1.36
HMGB1P36-201ENST00000487709 ELMO3Q96BJ8 720 aa6.56□□□□□ -1.36
HMGB1P36-201ENST00000487709 ALKBH8Q96BT7 664 aaKnown RBP6.56□□□□□ -1.36
HMGB1P36-201ENST00000487709 MIPEPQ99797 713 aa6.56□□□□□ -1.36
HMGB1P36-201ENST00000487709 CNTNAP4Q9C0A0 1308 aa6.55□□□□□ -1.36
HMGB1P36-201ENST00000487709 PRAMEF27A3QJZ7 478 aa6.55□□□□□ -1.36
HMGB1P36-201ENST00000487709 FBXO24O75426 580 aa6.55□□□□□ -1.36
HMGB1P36-201ENST00000487709 LRIG2O94898 1065 aa6.55□□□□□ -1.36
HMGB1P36-201ENST00000487709 TRIM37O94972 964 aa6.55□□□□□ -1.36
HMGB1P36-201ENST00000487709 INHBBP09529 407 aa6.55□□□□□ -1.36
HMGB1P36-201ENST00000487709 RING1Q06587 406 aa6.55□□□□□ -1.36
HMGB1P36-201ENST00000487709 KCNA10Q16322 511 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms