RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 TMEM88BA6NKF7 163 aa15.89■□□□□ 0.13
COL4A6-207ENST00000487645 FGAP02671 866 aa15.89■□□□□ 0.13
COL4A6-207ENST00000487645 PLCD1P51178 756 aa15.89■□□□□ 0.13
COL4A6-207ENST00000487645 APLP1P51693 650 aa15.89■□□□□ 0.13
COL4A6-207ENST00000487645 KIAA1211Q6ZU35 1233 aa15.89■□□□□ 0.13
COL4A6-207ENST00000487645 ZNF341Q9BYN7 854 aa15.89■□□□□ 0.13
COL4A6-207ENST00000487645 CTNNA3Q9UI47 895 aa15.89■□□□□ 0.13
COL4A6-207ENST00000487645 SERPINB13Q9UIV8 391 aa15.89■□□□□ 0.13
COL4A6-207ENST00000487645 ZNF112Q9UJU3 913 aa15.89■□□□□ 0.13
COL4A6-207ENST00000487645 LAMB1P07942 1786 aa15.89■□□□□ 0.13
COL4A6-207ENST00000487645 IREB2P48200 963 aaKnown RBP15.88■□□□□ 0.13
COL4A6-207ENST00000487645 MIGA2Q7L4E1 593 aa15.88■□□□□ 0.13
COL4A6-207ENST00000487645 CRACR2BQ8N4Y2 399 aaPredicted RBP15.88■□□□□ 0.13
COL4A6-207ENST00000487645 KLRG1Q96E93 195 aa15.88■□□□□ 0.13
COL4A6-207ENST00000487645 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.88■□□□□ 0.13
COL4A6-207ENST00000487645 MINDY4BA8MYZ0 360 aa15.87■□□□□ 0.13
COL4A6-207ENST00000487645 GABPAQ06546 454 aa15.87■□□□□ 0.13
COL4A6-207ENST00000487645 TTLL12Q14166 644 aaPredicted RBP15.87■□□□□ 0.13
COL4A6-207ENST00000487645 LDLRAD1Q5T700 205 aa15.87■□□□□ 0.13
COL4A6-207ENST00000487645 MAP4K1Q92918 833 aa15.87■□□□□ 0.13
COL4A6-207ENST00000487645 TRIM34Q9BYJ4 488 aa15.87■□□□□ 0.13
COL4A6-207ENST00000487645 CREBZFQ9NS37 354 aa15.87■□□□□ 0.13
COL4A6-207ENST00000487645 ANAPC4Q9UJX5 808 aa15.87■□□□□ 0.13
COL4A6-207ENST00000487645 ANGEL1Q9UNK9 670 aaKnown RBP15.87■□□□□ 0.13
COL4A6-207ENST00000487645 PHF20L1A8MW92 1017 aa15.86■□□□□ 0.13
COL4A6-207ENST00000487645 EIF5BO60841 1220 aaKnown RBP15.86■□□□□ 0.13
COL4A6-207ENST00000487645 CYP2D6P10635 497 aa15.86■□□□□ 0.13
COL4A6-207ENST00000487645 MAP3K9P80192 1104 aa15.86■□□□□ 0.13
COL4A6-207ENST00000487645 PTH1RQ03431 593 aa15.86■□□□□ 0.13
COL4A6-207ENST00000487645 PRKG1Q13976 671 aa15.86■□□□□ 0.13
COL4A6-207ENST00000487645 SWAP70Q9UH65 585 aa15.86■□□□□ 0.13
COL4A6-207ENST00000487645 LAMA4Q16363 1823 aa15.86■□□□□ 0.13
COL4A6-207ENST00000487645 ATAD5Q96QE3 1844 aa15.85■□□□□ 0.13
COL4A6-207ENST00000487645 CYP2D7A0A087X1C5 515 aa15.85■□□□□ 0.13
COL4A6-207ENST00000487645 UBE2Q2LH0YL09 131 aa15.85■□□□□ 0.13
COL4A6-207ENST00000487645 SLC3A2P08195 630 aaKnown RBP15.85■□□□□ 0.13
COL4A6-207ENST00000487645 SLC4A8Q2Y0W8 1093 aa15.85■□□□□ 0.13
COL4A6-207ENST00000487645 TATDN1Q6P1N9 297 aa15.85■□□□□ 0.13
COL4A6-207ENST00000487645 C16orf86Q6ZW13 317 aa15.85■□□□□ 0.13
COL4A6-207ENST00000487645 MOB2Q70IA6 237 aa15.85■□□□□ 0.13
COL4A6-207ENST00000487645 SAPCD2Q86UD0 394 aa15.85■□□□□ 0.13
COL4A6-207ENST00000487645 ANKRD13AQ8IZ07 590 aa15.85■□□□□ 0.13
COL4A6-207ENST00000487645 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.85■□□□□ 0.13
COL4A6-207ENST00000487645 HHIPL1Q96JK4 782 aa15.85■□□□□ 0.13
COL4A6-207ENST00000487645 LSG1Q9H089 658 aaKnown RBP15.85■□□□□ 0.13
COL4A6-207ENST00000487645 ZNF287Q9HBT7 754 aa15.85■□□□□ 0.13
COL4A6-207ENST00000487645 TLL2Q9Y6L7 1015 aa15.85■□□□□ 0.13
COL4A6-207ENST00000487645 U3KPZ7 1027 aaPredicted RBP15.85■□□□□ 0.13
COL4A6-207ENST00000487645 OTOFQ9HC10 1997 aa15.84■□□□□ 0.13
COL4A6-207ENST00000487645 ZNF213O14771 459 aa15.84■□□□□ 0.13
COL4A6-207ENST00000487645 EPB41L2O43491 1005 aaKnown RBP15.84■□□□□ 0.13
COL4A6-207ENST00000487645 CTNND1O60716 968 aaKnown RBP15.84■□□□□ 0.13
COL4A6-207ENST00000487645 REC8O95072 547 aa15.84■□□□□ 0.13
COL4A6-207ENST00000487645 PPARAQ07869 468 aa15.84■□□□□ 0.13
COL4A6-207ENST00000487645 WRNIP1Q96S55 665 aa15.84■□□□□ 0.13
COL4A6-207ENST00000487645 DNAJC18Q9H819 358 aa15.84■□□□□ 0.13
COL4A6-207ENST00000487645 ANO2Q9NQ90 1003 aa15.84■□□□□ 0.13
COL4A6-207ENST00000487645 GINM1Q9NU53 330 aa15.84■□□□□ 0.13
COL4A6-207ENST00000487645 FZD1Q9UP38 647 aa15.84■□□□□ 0.13
COL4A6-207ENST00000487645 ROBO3Q96MS0 1386 aa15.84■□□□□ 0.13
COL4A6-207ENST00000487645 FAM196BA6NMK8 535 aa15.83■□□□□ 0.12
COL4A6-207ENST00000487645 SLURP2P0DP57 97 aa15.83■□□□□ 0.12
COL4A6-207ENST00000487645 PCP11498 1178 aaKnown RBP15.83■□□□□ 0.12
COL4A6-207ENST00000487645 HSPA6P17066 643 aa15.83■□□□□ 0.12
COL4A6-207ENST00000487645 SHMT1P34896 483 aa15.83■□□□□ 0.12
COL4A6-207ENST00000487645 CDK8P49336 464 aa15.83■□□□□ 0.12
COL4A6-207ENST00000487645 HUNKP57058 714 aa15.83■□□□□ 0.12
COL4A6-207ENST00000487645 EVX2Q03828 476 aa15.83■□□□□ 0.12
COL4A6-207ENST00000487645 PDE4BQ07343 736 aa15.83■□□□□ 0.12
COL4A6-207ENST00000487645 IMMTQ16891 758 aaKnown RBP15.83■□□□□ 0.12
COL4A6-207ENST00000487645 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.83■□□□□ 0.12
COL4A6-207ENST00000487645 SLC10A4Q96EP9 437 aa15.83■□□□□ 0.12
COL4A6-207ENST00000487645 DYNLL2Q96FJ2 89 aa15.83■□□□□ 0.12
COL4A6-207ENST00000487645 ABT1Q9ULW3 272 aaKnown RBP15.83■□□□□ 0.12
COL4A6-207ENST00000487645 CSADQ9Y600 493 aa15.83■□□□□ 0.12
COL4A6-207ENST00000487645 DOCK1Q14185 1865 aa15.82■□□□□ 0.12
COL4A6-207ENST00000487645 SMIM22K7EJ46 135 aa15.82■□□□□ 0.12
COL4A6-207ENST00000487645 FGRP09769 529 aa15.82■□□□□ 0.12
COL4A6-207ENST00000487645 INPP5BP32019 993 aa15.82■□□□□ 0.12
COL4A6-207ENST00000487645 CAP2P40123 477 aa15.82■□□□□ 0.12
COL4A6-207ENST00000487645 CERKLQ49MI3 558 aaPredicted RBP15.82■□□□□ 0.12
COL4A6-207ENST00000487645 NOL9Q5SY16 702 aaKnown RBP15.82■□□□□ 0.12
COL4A6-207ENST00000487645 CCDC17Q96LX7 622 aa15.82■□□□□ 0.12
COL4A6-207ENST00000487645 MKNK2Q9HBH9 465 aa15.82■□□□□ 0.12
COL4A6-207ENST00000487645 RBM8AQ9Y5S9 174 aaKnown RBP15.82■□□□□ 0.12
COL4A6-207ENST00000487645 NT5C2P49902 561 aa15.81■□□□□ 0.12
COL4A6-207ENST00000487645 CTDSPL2Q05D32 466 aa15.81■□□□□ 0.12
COL4A6-207ENST00000487645 NECTIN1Q15223 517 aa15.81■□□□□ 0.12
COL4A6-207ENST00000487645 SCYL3Q8IZE3 742 aa15.81■□□□□ 0.12
COL4A6-207ENST00000487645 ZKSCAN4Q969J2 545 aaPredicted RBP15.81■□□□□ 0.12
COL4A6-207ENST00000487645 RASSF10A6NK89 507 aa15.8■□□□□ 0.12
COL4A6-207ENST00000487645 ASNSP08243 561 aa15.8■□□□□ 0.12
COL4A6-207ENST00000487645 VGLL4Q14135 290 aa15.8■□□□□ 0.12
COL4A6-207ENST00000487645 RRP1BQ14684 758 aaKnown RBP15.8■□□□□ 0.12
COL4A6-207ENST00000487645 DEFB115Q30KQ5 88 aa15.8■□□□□ 0.12
COL4A6-207ENST00000487645 AKNAD1Q5T1N1 836 aa15.8■□□□□ 0.12
COL4A6-207ENST00000487645 RGMBQ6NW40 437 aa15.8■□□□□ 0.12
COL4A6-207ENST00000487645 ZNF444Q8N0Y2 327 aaPredicted RBP15.8■□□□□ 0.12
COL4A6-207ENST00000487645 SLC44A5Q8NCS7 719 aa15.8■□□□□ 0.12
COL4A6-207ENST00000487645 STAG1Q8WVM7 1258 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms