RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 USP5P45974 858 aa24.8■■□□□ 1.56
HDAC4-209ENST00000487617 PAG1Q9NWQ8 432 aa24.8■■□□□ 1.56
HDAC4-209ENST00000487617 SAP30BPQ9UHR5 308 aaKnown RBP24.8■■□□□ 1.56
HDAC4-209ENST00000487617 HERC5Q9UII4 1024 aaKnown RBP24.8■■□□□ 1.56
HDAC4-209ENST00000487617 PALD1Q9ULE6 856 aa24.8■■□□□ 1.56
HDAC4-209ENST00000487617 HAUS7Q99871 368 aa24.79■■□□□ 1.56
HDAC4-209ENST00000487617 SP3Q02447 781 aa24.78■■□□□ 1.56
HDAC4-209ENST00000487617 ANKRD23Q86SG2 305 aa24.78■■□□□ 1.56
HDAC4-209ENST00000487617 ERO1AQ96HE7 468 aa24.78■■□□□ 1.56
HDAC4-209ENST00000487617 TRIM34Q9BYJ4 488 aa24.78■■□□□ 1.56
HDAC4-209ENST00000487617 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.78■■□□□ 1.56
HDAC4-209ENST00000487617 AFG3L2Q9Y4W6 797 aa24.78■■□□□ 1.56
HDAC4-209ENST00000487617 MAGEB6P1A0A0J9YX57 407 aa24.77■■□□□ 1.56
HDAC4-209ENST00000487617 HLA-DOAP06340 250 aa24.77■■□□□ 1.56
HDAC4-209ENST00000487617 FOXP4Q8IVH2 680 aaPredicted RBP24.77■■□□□ 1.56
HDAC4-209ENST00000487617 CRACR2BQ8N4Y2 399 aaPredicted RBP24.77■■□□□ 1.56
HDAC4-209ENST00000487617 CD99L2Q8TCZ2 262 aa24.77■■□□□ 1.56
HDAC4-209ENST00000487617 ZNF532Q9HCE3 1301 aa24.77■■□□□ 1.56
HDAC4-209ENST00000487617 PDHXO00330 501 aa24.76■■□□□ 1.55
HDAC4-209ENST00000487617 CAP2P40123 477 aa24.76■■□□□ 1.55
HDAC4-209ENST00000487617 MOGSQ13724 837 aa24.76■■□□□ 1.55
HDAC4-209ENST00000487617 SLC4A8Q2Y0W8 1093 aa24.76■■□□□ 1.55
HDAC4-209ENST00000487617 CCDC84Q86UT8 332 aaPredicted RBP24.76■■□□□ 1.55
HDAC4-209ENST00000487617 RIOK1Q9BRS2 568 aaKnown RBP24.76■■□□□ 1.55
HDAC4-209ENST00000487617 ECHDC1Q9NTX5 307 aa24.76■■□□□ 1.55
HDAC4-209ENST00000487617 TRIM17Q9Y577 477 aa24.76■■□□□ 1.55
HDAC4-209ENST00000487617 A0A0G2JLL6 359 aaPredicted RBP24.75■■□□□ 1.55
HDAC4-209ENST00000487617 TRIM75PA6NK02 468 aa24.75■■□□□ 1.55
HDAC4-209ENST00000487617 TLR2O60603 784 aa24.75■■□□□ 1.55
HDAC4-209ENST00000487617 RRP1BQ14684 758 aaKnown RBP24.75■■□□□ 1.55
HDAC4-209ENST00000487617 PRRT2Q7Z6L0 340 aaPredicted RBP24.75■■□□□ 1.55
HDAC4-209ENST00000487617 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.75■■□□□ 1.55
HDAC4-209ENST00000487617 TCRBV5S4A2TA0A5A2 114 aa24.74■■□□□ 1.55
HDAC4-209ENST00000487617 FBXO46Q6PJ61 603 aaPredicted RBP24.74■■□□□ 1.55
HDAC4-209ENST00000487617 FASTKD5Q7L8L6 764 aaKnown RBP24.74■■□□□ 1.55
HDAC4-209ENST00000487617 OTOP1Q7RTM1 612 aa24.74■■□□□ 1.55
HDAC4-209ENST00000487617 METTL16Q86W50 562 aaKnown RBP24.74■■□□□ 1.55
HDAC4-209ENST00000487617 GPATCH3Q96I76 525 aa24.74■■□□□ 1.55
HDAC4-209ENST00000487617 DNAJC18Q9H819 358 aa24.74■■□□□ 1.55
HDAC4-209ENST00000487617 HPS5Q9UPZ3 1129 aa24.74■■□□□ 1.55
HDAC4-209ENST00000487617 GPAT2Q6NUI2 795 aa24.73■■□□□ 1.55
HDAC4-209ENST00000487617 GADL1Q6ZQY3 521 aa24.73■■□□□ 1.55
HDAC4-209ENST00000487617 CRNKL1Q9BZJ0 848 aaKnown RBP24.73■■□□□ 1.55
HDAC4-209ENST00000487617 DOCK1Q14185 1865 aa24.72■■□□□ 1.55
HDAC4-209ENST00000487617 ADD2P35612 726 aa24.72■■□□□ 1.55
HDAC4-209ENST00000487617 EFCC1Q9HA90 598 aa24.72■■□□□ 1.55
HDAC4-209ENST00000487617 USP17L5A8MUK1 530 aa24.71■■□□□ 1.55
HDAC4-209ENST00000487617 SLFNL1Q499Z3 407 aa24.71■■□□□ 1.55
HDAC4-209ENST00000487617 TSHZ3Q63HK5 1081 aa24.71■■□□□ 1.55
HDAC4-209ENST00000487617 TBC1D2Q9BYX2 928 aa24.71■■□□□ 1.55
HDAC4-209ENST00000487617 CDK5RAP2Q96SN8 1893 aa24.7■■□□□ 1.55
HDAC4-209ENST00000487617 FOCADQ5VW36 1801 aa24.7■■□□□ 1.55
HDAC4-209ENST00000487617 SPP2Q13103 211 aa24.7■■□□□ 1.54
HDAC4-209ENST00000487617 ARHGEF6Q15052 776 aa24.7■■□□□ 1.54
HDAC4-209ENST00000487617 TTC6Q86TZ1 520 aa24.7■■□□□ 1.54
HDAC4-209ENST00000487617 LCORLQ8N3X6 602 aa24.7■■□□□ 1.54
HDAC4-209ENST00000487617 ZNF280CQ8ND82 737 aa24.7■■□□□ 1.54
HDAC4-209ENST00000487617 PARK7Q99497 189 aaKnown RBP24.7■■□□□ 1.54
HDAC4-209ENST00000487617 CPA4Q9UI42 421 aa24.7■■□□□ 1.54
HDAC4-209ENST00000487617 POLR3DP05423 398 aaPredicted RBP24.69■■□□□ 1.54
HDAC4-209ENST00000487617 ASNSP08243 561 aa24.69■■□□□ 1.54
HDAC4-209ENST00000487617 CAP1Q01518 475 aa24.69■■□□□ 1.54
HDAC4-209ENST00000487617 ARMT1Q9H993 441 aa24.69■■□□□ 1.54
HDAC4-209ENST00000487617 AS3MTQ9HBK9 375 aa24.69■■□□□ 1.54
HDAC4-209ENST00000487617 SERPINB13Q9UIV8 391 aa24.69■■□□□ 1.54
HDAC4-209ENST00000487617 SIPA1L1O43166 1804 aa24.69■■□□□ 1.54
HDAC4-209ENST00000487617 MBD4O95243 580 aa24.68■■□□□ 1.54
HDAC4-209ENST00000487617 GDF11O95390 407 aa24.68■■□□□ 1.54
HDAC4-209ENST00000487617 CYP2C8P10632 490 aa24.68■■□□□ 1.54
HDAC4-209ENST00000487617 KIF22Q14807 665 aa24.68■■□□□ 1.54
HDAC4-209ENST00000487617 UBE3CQ15386 1083 aa24.68■■□□□ 1.54
HDAC4-209ENST00000487617 ZSCAN25Q6NSZ9 544 aa24.68■■□□□ 1.54
HDAC4-209ENST00000487617 C17orf99Q6UX52 265 aa24.68■■□□□ 1.54
HDAC4-209ENST00000487617 SDR42E1Q8WUS8 393 aa24.68■■□□□ 1.54
HDAC4-209ENST00000487617 EHD4Q9H223 541 aa24.68■■□□□ 1.54
HDAC4-209ENST00000487617 CHGBP05060 677 aa24.67■■□□□ 1.54
HDAC4-209ENST00000487617 JAG1P78504 1218 aa24.67■■□□□ 1.54
HDAC4-209ENST00000487617 LACTBP83111 547 aaPredicted RBP24.67■■□□□ 1.54
HDAC4-209ENST00000487617 GINM1Q9NU53 330 aa24.67■■□□□ 1.54
HDAC4-209ENST00000487617 MCM9Q9NXL9 1143 aa24.67■■□□□ 1.54
HDAC4-209ENST00000487617 ZBTB47Q9UFB7 747 aaPredicted RBP24.67■■□□□ 1.54
HDAC4-209ENST00000487617 PTPN22Q9Y2R2 807 aa24.67■■□□□ 1.54
HDAC4-209ENST00000487617 SLC45A1Q9Y2W3 748 aa24.67■■□□□ 1.54
HDAC4-209ENST00000487617 ADGRA2Q96PE1 1338 aa24.66■■□□□ 1.54
HDAC4-209ENST00000487617 PLCD1P51178 756 aa24.66■■□□□ 1.54
HDAC4-209ENST00000487617 SHROOM1Q2M3G4 852 aaPredicted RBP24.66■■□□□ 1.54
HDAC4-209ENST00000487617 ZBTB21Q9ULJ3 1066 aa24.66■■□□□ 1.54
HDAC4-209ENST00000487617 AGTPBP1Q9UPW5 1226 aa24.66■■□□□ 1.54
HDAC4-209ENST00000487617 HMGCS2P54868 508 aa24.65■■□□□ 1.54
HDAC4-209ENST00000487617 HDAC1Q13547 482 aaPredicted RBP24.65■■□□□ 1.54
HDAC4-209ENST00000487617 AAMPQ13685 434 aa24.65■■□□□ 1.54
HDAC4-209ENST00000487617 PROCA1Q8NCQ7 364 aaPredicted RBP24.65■■□□□ 1.54
HDAC4-209ENST00000487617 WDR18Q9BV38 432 aa24.65■■□□□ 1.54
HDAC4-209ENST00000487617 DCP1AQ9NPI6 582 aaPredicted RBP24.65■■□□□ 1.54
HDAC4-209ENST00000487617 PHIPQ8WWQ0 1821 aa24.65■■□□□ 1.54
HDAC4-209ENST00000487617 TTC41PQ6P2S7 1318 aa24.64■■□□□ 1.54
HDAC4-209ENST00000487617 ERC2O15083 957 aa24.64■■□□□ 1.54
HDAC4-209ENST00000487617 PRKAB2O43741 272 aa24.64■■□□□ 1.54
HDAC4-209ENST00000487617 ECM2O94769 699 aaPredicted RBP24.64■■□□□ 1.54
HDAC4-209ENST00000487617 TREML2Q5T2D2 321 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms