RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 STK11IPQ8N1F8 1099 aa9.47□□□□□ -0.89
RBM28-206ENST00000487602 TBC1D2Q9BYX2 928 aa9.47□□□□□ -0.89
RBM28-206ENST00000487602 DHX36Q9H2U1 1008 aaKnown RBP9.47□□□□□ -0.89
RBM28-206ENST00000487602 CNNM2Q9H8M5 875 aa9.47□□□□□ -0.89
RBM28-206ENST00000487602 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.47□□□□□ -0.89
RBM28-206ENST00000487602 NEDD4P46934 1319 aa9.47□□□□□ -0.89
RBM28-206ENST00000487602 B4E1Z4 1266 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 TCP10L2B9ZVM9 353 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 EGFRP00533 1210 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 LMOD1P29536 600 aaPredicted RBP9.46□□□□□ -0.9
RBM28-206ENST00000487602 MCM5P33992 734 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 AK2P54819 239 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 TCP10Q12799 353 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 KIF4BQ2VIQ3 1234 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 SLC4A8Q2Y0W8 1093 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 TBC1D10BQ4KMP7 808 aaPredicted RBP9.46□□□□□ -0.9
RBM28-206ENST00000487602 Q6ZUG5 572 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 C16orf86Q6ZW13 317 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 CYB5R4Q7L1T6 521 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 NKX2-3Q8TAU0 364 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 FAM151AQ8WW52 585 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 DYNLL2Q96FJ2 89 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 L3MBTL3Q96JM7 780 aaPredicted RBP9.46□□□□□ -0.9
RBM28-206ENST00000487602 TCEANC2Q96MN5 208 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 TOMM22Q9NS69 142 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 ZSWIM5Q9P217 1185 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 ECM29Q5VYK3 1845 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 WDR19Q8NEZ3 1342 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 ROBO3Q96MS0 1386 aa9.46□□□□□ -0.9
RBM28-206ENST00000487602 BAZ2AQ9UIF9 1905 aaKnown RBP9.46□□□□□ -0.9
RBM28-206ENST00000487602 UTRNP46939 3433 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 GLTPD2A6NH11 291 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 DDTLA6NHG4 134 aaPredicted RBP9.45□□□□□ -0.9
RBM28-206ENST00000487602 PRC1O43663 620 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 KDM4AO75164 1064 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 PRDM1O75626 825 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 HLA-DOAP06340 250 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 CDK8P49336 464 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 NT5C2P49902 561 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 ANTXR2P58335 489 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 GABPAQ06546 454 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 MKRN4PQ13434 485 aaPredicted RBP9.45□□□□□ -0.9
RBM28-206ENST00000487602 TOB2Q14106 344 aaPredicted RBP9.45□□□□□ -0.9
RBM28-206ENST00000487602 ANKRD1Q15327 319 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 RRP12Q5JTH9 1297 aaKnown RBP9.45□□□□□ -0.9
RBM28-206ENST00000487602 SH3BP5LQ7L8J4 393 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 CHST3Q7LGC8 479 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 FAM83AQ86UY5 434 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 FOXP4Q8IVH2 680 aaPredicted RBP9.45□□□□□ -0.9
RBM28-206ENST00000487602 FBXL16Q8N461 479 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 TRPM4Q8TD43 1214 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 ESR2Q92731 530 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 LRRC2Q9BYS8 371 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 AGXT2Q9BYV1 514 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 EHD4Q9H223 541 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 MKNK2Q9HBH9 465 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 VEZTQ9HBM0 779 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 ZNF287Q9HBT7 754 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 PI4KBQ9UBF8 816 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 TAOK2Q9UL54 1235 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 CDK5RAP2Q96SN8 1893 aa9.45□□□□□ -0.9
RBM28-206ENST00000487602 K7ELQ4 463 aaPredicted RBP9.44□□□□□ -0.9
RBM28-206ENST00000487602 RANBP6O60518 1105 aaKnown RBP9.44□□□□□ -0.9
RBM28-206ENST00000487602 RASA1P20936 1047 aa9.44□□□□□ -0.9
RBM28-206ENST00000487602 TNNI2P48788 182 aa9.44□□□□□ -0.9
RBM28-206ENST00000487602 HIRAP54198 1017 aaPredicted RBP9.44□□□□□ -0.9
RBM28-206ENST00000487602 TNFAIP1Q13829 316 aa9.44□□□□□ -0.9
RBM28-206ENST00000487602 METTL16Q86W50 562 aaKnown RBP9.44□□□□□ -0.9
RBM28-206ENST00000487602 ZSCAN29Q8IWY8 852 aaPredicted RBP9.44□□□□□ -0.9
RBM28-206ENST00000487602 ZNF444Q8N0Y2 327 aaPredicted RBP9.44□□□□□ -0.9
RBM28-206ENST00000487602 TMEM87BQ96K49 555 aa9.44□□□□□ -0.9
RBM28-206ENST00000487602 ZSCAN31Q96LW9 406 aaPredicted RBP9.44□□□□□ -0.9
RBM28-206ENST00000487602 MTA3Q9BTC8 594 aa9.44□□□□□ -0.9
RBM28-206ENST00000487602 ADARB2Q9NS39 739 aaKnown RBP9.44□□□□□ -0.9
RBM28-206ENST00000487602 DAXXQ9UER7 740 aaPredicted RBP9.44□□□□□ -0.9
RBM28-206ENST00000487602 SWAP70Q9UH65 585 aa9.44□□□□□ -0.9
RBM28-206ENST00000487602 PGAP2Q9UHJ9 254 aa9.44□□□□□ -0.9
RBM28-206ENST00000487602 SERPINB13Q9UIV8 391 aa9.44□□□□□ -0.9
RBM28-206ENST00000487602 HACL1Q9UJ83 578 aa9.44□□□□□ -0.9
RBM28-206ENST00000487602 LIMCH1Q9UPQ0 1083 aa9.44□□□□□ -0.9
RBM28-206ENST00000487602 CNTNAP1P78357 1384 aa9.44□□□□□ -0.9
RBM28-206ENST00000487602 ATRNL1Q5VV63 1379 aa9.44□□□□□ -0.9
RBM28-206ENST00000487602 COL2A1P02458 1487 aaPredicted RBP9.44□□□□□ -0.9
RBM28-206ENST00000487602 LAMA4Q16363 1823 aa9.44□□□□□ -0.9
RBM28-206ENST00000487602 MYH1P12882 1939 aa9.43□□□□□ -0.9
RBM28-206ENST00000487602 NAV1Q8NEY1 1877 aa9.43□□□□□ -0.9
RBM28-206ENST00000487602 FOCADQ5VW36 1801 aa9.43□□□□□ -0.9
RBM28-206ENST00000487602 ASTN2O75129 1339 aaPredicted RBP9.43□□□□□ -0.9
RBM28-206ENST00000487602 SH2B2O14492 632 aaPredicted RBP9.43□□□□□ -0.9
RBM28-206ENST00000487602 IFIT3O14879 490 aaKnown RBP9.43□□□□□ -0.9
RBM28-206ENST00000487602 SLC4A3P48751 1232 aa9.43□□□□□ -0.9
RBM28-206ENST00000487602 FGD1P98174 961 aa9.43□□□□□ -0.9
RBM28-206ENST00000487602 RASA3Q14644 834 aa9.43□□□□□ -0.9
RBM28-206ENST00000487602 FAM47AQ5JRC9 791 aa9.43□□□□□ -0.9
RBM28-206ENST00000487602 NOL8Q76FK4 1167 aaKnown RBP9.43□□□□□ -0.9
RBM28-206ENST00000487602 SLC44A5Q8NCS7 719 aa9.43□□□□□ -0.9
RBM28-206ENST00000487602 IGDCC4Q8TDY8 1250 aa9.43□□□□□ -0.9
RBM28-206ENST00000487602 BRF1Q92994 677 aa9.43□□□□□ -0.9
RBM28-206ENST00000487602 TMX3Q96JJ7 454 aa9.43□□□□□ -0.9
RBM28-206ENST00000487602 LARP6Q9BRS8 491 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms