RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 ME3Q16798 604 aa8.46□□□□□ -1.06
CCNB3-206ENST00000487204 CIAPIN1Q6FI81 312 aa8.46□□□□□ -1.06
CCNB3-206ENST00000487204 NOL8Q76FK4 1167 aaKnown RBP8.46□□□□□ -1.06
CCNB3-206ENST00000487204 KIAA0825Q8IV33 1275 aa8.46□□□□□ -1.06
CCNB3-206ENST00000487204 SPRYD3Q8NCJ5 442 aa8.46□□□□□ -1.06
CCNB3-206ENST00000487204 RGS22Q8NE09 1264 aa8.46□□□□□ -1.06
CCNB3-206ENST00000487204 GTF3C6Q969F1 213 aa8.46□□□□□ -1.06
CCNB3-206ENST00000487204 IDI2Q9BXS1 227 aa8.46□□□□□ -1.06
CCNB3-206ENST00000487204 NBPF3Q9H094 633 aa8.46□□□□□ -1.06
CCNB3-206ENST00000487204 USP40Q9NVE5 1235 aa8.46□□□□□ -1.06
CCNB3-206ENST00000487204 ZSWIM5Q9P217 1185 aa8.46□□□□□ -1.06
CCNB3-206ENST00000487204 SWAP70Q9UH65 585 aa8.46□□□□□ -1.06
CCNB3-206ENST00000487204 FLT1P17948 1338 aa8.46□□□□□ -1.06
CCNB3-206ENST00000487204 CCDC69A6NI79 296 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 YDJCA8MPS7 323 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 PSMD14O00487 310 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 SH2B2O14492 632 aaPredicted RBP8.45□□□□□ -1.06
CCNB3-206ENST00000487204 MYO1BO43795 1136 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 USP17L8P0C7I0 530 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 CALM1P0DP23 149 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 CALM2P0DP24 149 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 CALM3P0DP25 149 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 SCNN1DP51172 638 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 WTAPQ15007 396 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 TMEM67Q5HYA8 995 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 RRP12Q5JTH9 1297 aaKnown RBP8.45□□□□□ -1.06
CCNB3-206ENST00000487204 APOBEC3HQ6NTF7 200 aaKnown RBP8.45□□□□□ -1.06
CCNB3-206ENST00000487204 NFXL1Q6ZNB6 911 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 ZNF444Q8N0Y2 327 aaPredicted RBP8.45□□□□□ -1.06
CCNB3-206ENST00000487204 MTMR14Q8NCE2 650 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 IGDCC4Q8TDY8 1250 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 GBP4Q96PP9 640 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 MKNK2Q9HBH9 465 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCNB3-206ENST00000487204 ATP6V1DQ9Y5K8 247 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 SLC12A7Q9Y666 1083 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 NEDD4P46934 1319 aa8.45□□□□□ -1.06
CCNB3-206ENST00000487204 BRCA1P38398 1863 aaKnown RBP8.45□□□□□ -1.06
CCNB3-206ENST00000487204 MYH2Q9UKX2 1941 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 KLF18A0A0U1RQI7 1052 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 TSPY2A6NKD2 308 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 GOLGA6L22H0YM25 854 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 NFKBIEO00221 500 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 CPLX1O14810 134 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 RANBP6O60518 1105 aaKnown RBP8.44□□□□□ -1.06
CCNB3-206ENST00000487204 ENTPD3O75355 529 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 PDIA3P30101 505 aaKnown RBP8.44□□□□□ -1.06
CCNB3-206ENST00000487204 ANTXR2P58335 489 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 APOBRQ0VD83 1088 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 RAB3GAP1Q15042 981 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 DLGAP5Q15398 846 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 CFAP100Q494V2 611 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 FKBP1CQ5VVH2 108 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 CDC42EP5Q6NZY7 148 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 C16orf86Q6ZW13 317 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 CYB5R4Q7L1T6 521 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 MAPKAPK5Q8IW41 473 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 CCDC83Q8IWF9 413 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 DPF2Q92785 391 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 TCEANC2Q96MN5 208 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 ZSCAN10Q96SZ4 725 aaPredicted RBP8.44□□□□□ -1.06
CCNB3-206ENST00000487204 GMLQ99445 158 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 FHDC1Q9C0D6 1143 aaPredicted RBP8.44□□□□□ -1.06
CCNB3-206ENST00000487204 OSBPL5Q9H0X9 879 aaPredicted RBP8.44□□□□□ -1.06
CCNB3-206ENST00000487204 EHD4Q9H223 541 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 KCNQ5Q9NR82 932 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 TCP11L1Q9NUJ3 509 aa8.44□□□□□ -1.06
CCNB3-206ENST00000487204 NAP1L2Q9ULW6 460 aaPredicted RBP8.44□□□□□ -1.06
CCNB3-206ENST00000487204 WDR33Q9C0J8 1336 aaKnown RBP8.44□□□□□ -1.06
CCNB3-206ENST00000487204 COL2A1P02458 1487 aaPredicted RBP8.44□□□□□ -1.06
CCNB3-206ENST00000487204 FER1L6Q2WGJ9 1857 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 GOLGA8BA8MQT2 603 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 FZD9O00144 591 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 ZBTB43O43298 467 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 WDHD1O75717 1129 aaPredicted RBP8.43□□□□□ -1.06
CCNB3-206ENST00000487204 RAD17O75943 681 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 TSPY3P0CV98 308 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 TSPY8P0CW00 308 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 CD44P16070 742 aaKnown RBP8.43□□□□□ -1.06
CCNB3-206ENST00000487204 LMNB1P20700 586 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 CXCL9Q07325 125 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 IFIT1BQ5T764 474 aaKnown RBP8.43□□□□□ -1.06
CCNB3-206ENST00000487204 CLEC17AQ6ZS10 378 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 CHST3Q7LGC8 479 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 CATIPQ7Z7H3 387 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 DGKHQ86XP1 1220 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 FOXP4Q8IVH2 680 aaPredicted RBP8.43□□□□□ -1.06
CCNB3-206ENST00000487204 FAM184AQ8NB25 1140 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 NLGN2Q8NFZ4 835 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 CCDC17Q96LX7 622 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 MXD3Q9BW11 206 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 TRIM34Q9BYJ4 488 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 LRRC2Q9BYS8 371 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 LY9Q9HBG7 655 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 RBM28Q9NW13 759 aaKnown RBP8.43□□□□□ -1.06
CCNB3-206ENST00000487204 PI4KBQ9UBF8 816 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 SERPINB13Q9UIV8 391 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 ARFGEF1Q9Y6D6 1849 aa8.43□□□□□ -1.06
CCNB3-206ENST00000487204 CHD4Q14839 1912 aa8.42□□□□□ -1.06
CCNB3-206ENST00000487204 DDAH1O94760 285 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms