RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 ELMO3Q96BJ8 720 aa7.73□□□□□ -1.17
COPS3-209ENST00000486810 MRRFQ96E11 262 aaKnown RBP7.73□□□□□ -1.17
COPS3-209ENST00000486810 FBRSQ9HAH7 460 aa7.73□□□□□ -1.17
COPS3-209ENST00000486810 PCOLCE2Q9UKZ9 415 aa7.73□□□□□ -1.17
COPS3-209ENST00000486810 CDK11AQ9UQ88 783 aaPredicted RBP7.73□□□□□ -1.17
COPS3-209ENST00000486810 SNCAIPQ9Y6H5 919 aa7.73□□□□□ -1.17
COPS3-209ENST00000486810 PRAMEF27A3QJZ7 478 aa7.72□□□□□ -1.17
COPS3-209ENST00000486810 FANCGO15287 622 aa7.72□□□□□ -1.17
COPS3-209ENST00000486810 FAM160A1Q05DH4 1040 aa7.72□□□□□ -1.17
COPS3-209ENST00000486810 TSNAXIP1Q2TAA8 658 aa7.72□□□□□ -1.17
COPS3-209ENST00000486810 CILPO75339 1184 aa7.71□□□□□ -1.18
COPS3-209ENST00000486810 HOXA10P31260 410 aaPredicted RBP7.71□□□□□ -1.18
COPS3-209ENST00000486810 FBXL19Q6PCT2 694 aa7.71□□□□□ -1.18
COPS3-209ENST00000486810 HDXQ7Z353 690 aa7.71□□□□□ -1.18
COPS3-209ENST00000486810 CCDC84Q86UT8 332 aaPredicted RBP7.71□□□□□ -1.18
COPS3-209ENST00000486810 WNT10AQ9GZT5 417 aa7.71□□□□□ -1.18
COPS3-209ENST00000486810 KCNQ5Q9NR82 932 aa7.71□□□□□ -1.18
COPS3-209ENST00000486810 GGT7Q9UJ14 662 aa7.71□□□□□ -1.18
COPS3-209ENST00000486810 RBAK-RBAKDNI3L0D1 243 aa7.7□□□□□ -1.18
COPS3-209ENST00000486810 LEFTY1O75610 366 aa7.7□□□□□ -1.18
COPS3-209ENST00000486810 LMNB1P20700 586 aa7.7□□□□□ -1.18
COPS3-209ENST00000486810 RPL6Q02878 288 aaKnown RBP7.7□□□□□ -1.18
COPS3-209ENST00000486810 ZNF765Q7L2R6 523 aa7.7□□□□□ -1.18
COPS3-209ENST00000486810 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.7□□□□□ -1.18
COPS3-209ENST00000486810 FBXO27Q8NI29 283 aa7.7□□□□□ -1.18
COPS3-209ENST00000486810 GATAD2BQ8WXI9 593 aa7.7□□□□□ -1.18
COPS3-209ENST00000486810 ADAMTS1Q9UHI8 967 aa7.7□□□□□ -1.18
COPS3-209ENST00000486810 GREM1O60565 184 aa7.69□□□□□ -1.18
COPS3-209ENST00000486810 GRK4P32298 578 aa7.69□□□□□ -1.18
COPS3-209ENST00000486810 PWP1Q13610 501 aa7.69□□□□□ -1.18
COPS3-209ENST00000486810 SLBPQ14493 270 aaKnown RBP eCLIP7.69□□□□□ -1.18
COPS3-209ENST00000486810 NKG7Q16617 165 aa7.69□□□□□ -1.18
COPS3-209ENST00000486810 OGFOD3Q6PK18 319 aa7.69□□□□□ -1.18
COPS3-209ENST00000486810 HS2ST1Q7LGA3 356 aa7.69□□□□□ -1.18
COPS3-209ENST00000486810 GOLM1Q8NBJ4 401 aa7.69□□□□□ -1.18
COPS3-209ENST00000486810 U3KQE9 123 aa7.69□□□□□ -1.18
COPS3-209ENST00000486810 FAM87AP0C7U9 286 aa7.68□□□□□ -1.18
COPS3-209ENST00000486810 ZNF76P36508 570 aa7.68□□□□□ -1.18
COPS3-209ENST00000486810 DUSP23Q9BVJ7 150 aa7.68□□□□□ -1.18
COPS3-209ENST00000486810 SSU72Q9NP77 194 aaKnown RBP7.68□□□□□ -1.18
COPS3-209ENST00000486810 PICK1Q9NRD5 415 aa7.68□□□□□ -1.18
COPS3-209ENST00000486810 POLR3KQ9Y2Y1 108 aaPredicted RBP7.68□□□□□ -1.18
COPS3-209ENST00000486810 CORINQ9Y5Q5 1042 aa7.68□□□□□ -1.18
COPS3-209ENST00000486810 SSTR4P31391 388 aa7.67□□□□□ -1.18
COPS3-209ENST00000486810 EIF4A3P38919 411 aaKnown RBP7.67□□□□□ -1.18
COPS3-209ENST00000486810 CD97P48960 835 aa7.67□□□□□ -1.18
COPS3-209ENST00000486810 ZNF394Q53GI3 561 aa7.67□□□□□ -1.18
COPS3-209ENST00000486810 SNAP47Q5SQN1 464 aa7.67□□□□□ -1.18
COPS3-209ENST00000486810 FAM196AQ6ZSG2 479 aa7.67□□□□□ -1.18
COPS3-209ENST00000486810 FAM214BQ7L5A3 538 aa7.67□□□□□ -1.18
COPS3-209ENST00000486810 METTL16Q86W50 562 aaKnown RBP7.67□□□□□ -1.18
COPS3-209ENST00000486810 ZNF507Q8TCN5 953 aa7.67□□□□□ -1.18
COPS3-209ENST00000486810 OSBPL1AQ9BXW6 950 aa7.67□□□□□ -1.18
COPS3-209ENST00000486810 METTL5Q9NRN9 209 aaKnown RBP7.67□□□□□ -1.18
COPS3-209ENST00000486810 ATG3Q9NT62 314 aa7.67□□□□□ -1.18
COPS3-209ENST00000486810 PIM2Q9P1W9 311 aa7.67□□□□□ -1.18
COPS3-209ENST00000486810 TACC3Q9Y6A5 838 aa7.67□□□□□ -1.18
COPS3-209ENST00000486810 LOC100996750A0A140TA64 210 aa7.66□□□□□ -1.18
COPS3-209ENST00000486810 HYAL3O43820 417 aaPredicted RBP7.66□□□□□ -1.18
COPS3-209ENST00000486810 CRKP46108 304 aa7.66□□□□□ -1.18
COPS3-209ENST00000486810 Q8N3U1 123 aa7.66□□□□□ -1.18
COPS3-209ENST00000486810 TOP6BLQ8N6T0 577 aa7.66□□□□□ -1.18
COPS3-209ENST00000486810 ZNF296Q8WUU4 475 aaPredicted RBP7.66□□□□□ -1.18
COPS3-209ENST00000486810 CHMP4AQ9BY43 222 aa7.66□□□□□ -1.18
COPS3-209ENST00000486810 KRTAP4-6Q9BYQ5 205 aa7.66□□□□□ -1.18
COPS3-209ENST00000486810 TJP2Q9UDY2 1190 aa7.66□□□□□ -1.18
COPS3-209ENST00000486810 PCDHGB7Q9Y5F8 929 aa7.66□□□□□ -1.18
COPS3-209ENST00000486810 CAP2P40123 477 aa7.65□□□□□ -1.18
COPS3-209ENST00000486810 ETF1P62495 437 aaKnown RBP7.65□□□□□ -1.18
COPS3-209ENST00000486810 RACK1P63244 317 aaKnown RBP7.65□□□□□ -1.18
COPS3-209ENST00000486810 LRP8Q14114 963 aa7.65□□□□□ -1.18
COPS3-209ENST00000486810 ARTNQ5T4W7 220 aa7.65□□□□□ -1.18
COPS3-209ENST00000486810 ARMCX6Q7L4S7 300 aa7.65□□□□□ -1.18
COPS3-209ENST00000486810 METTL22Q9BUU2 404 aaPredicted RBP7.65□□□□□ -1.18
COPS3-209ENST00000486810 LEMD3Q9Y2U8 911 aa7.65□□□□□ -1.18
COPS3-209ENST00000486810 CNTNAP4Q9C0A0 1308 aa7.64□□□□□ -1.19
COPS3-209ENST00000486810 PRR36Q9H6K5 1346 aa7.64□□□□□ -1.19
COPS3-209ENST00000486810 KIAA1324LA8MWY0 1029 aaPredicted RBP7.64□□□□□ -1.19
COPS3-209ENST00000486810 SCAMP3O14828 347 aaKnown RBP7.64□□□□□ -1.19
COPS3-209ENST00000486810 TLR3O15455 904 aaKnown RBP7.64□□□□□ -1.19
COPS3-209ENST00000486810 COBLO75128 1261 aa7.64□□□□□ -1.19
COPS3-209ENST00000486810 ADAMTS4O75173 837 aa7.64□□□□□ -1.19
COPS3-209ENST00000486810 PGRP06401 933 aa7.64□□□□□ -1.19
COPS3-209ENST00000486810 FOSL1P15407 271 aa7.64□□□□□ -1.19
COPS3-209ENST00000486810 SPINK2P20155 84 aa7.64□□□□□ -1.19
COPS3-209ENST00000486810 HDLBPQ00341 1268 aaKnown RBP7.64□□□□□ -1.19
COPS3-209ENST00000486810 MPP2Q14168 576 aa7.64□□□□□ -1.19
COPS3-209ENST00000486810 CPSF6Q16630 551 aaKnown RBP eCLIP7.64□□□□□ -1.19
COPS3-209ENST00000486810 MSMPQ1L6U9 139 aa7.64□□□□□ -1.19
COPS3-209ENST00000486810 CDC37L1Q7L3B6 337 aa7.64□□□□□ -1.19
COPS3-209ENST00000486810 HID1Q8IV36 788 aa7.64□□□□□ -1.19
COPS3-209ENST00000486810 KCT2Q8NC54 265 aa7.64□□□□□ -1.19
COPS3-209ENST00000486810 RNF34Q969K3 372 aa7.64□□□□□ -1.19
COPS3-209ENST00000486810 ACSF2Q96CM8 615 aaPredicted RBP7.64□□□□□ -1.19
COPS3-209ENST00000486810 EAF1Q96JC9 268 aaPredicted RBP7.64□□□□□ -1.19
COPS3-209ENST00000486810 HEXIM2Q96MH2 286 aaKnown RBP7.64□□□□□ -1.19
COPS3-209ENST00000486810 LRRC3Q9BY71 257 aa7.64□□□□□ -1.19
COPS3-209ENST00000486810 GRIN3BO60391 1043 aa7.63□□□□□ -1.19
COPS3-209ENST00000486810 LRIG2O94898 1065 aa7.63□□□□□ -1.19
COPS3-209ENST00000486810 SLITRK5O94991 958 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms