RNA–Protein interactions for RNA: ENST00000486695.1

KIFC1-213, Transcript of kinesin family member C1, human

TSL 3

Gene KIFC1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC1-213	ENST00000486695	KLF18	A0A0U1RQI7	1052 aa		10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	SH2B2	O14492	632 aa	Predicted RBP	10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	DHX16	O60231	1041 aa	Known RBP	10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	USP17L8	P0C7I0	530 aa		10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	RBM5	P52756	815 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	EVC	P57679	992 aa		10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	RHBDL3	P58872	404 aa		10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	RAB3GAP1	Q15042	981 aa		10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	TMEM67	Q5HYA8	995 aa		10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	C12orf60	Q5U649	245 aa		10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	SYNE3	Q6ZMZ3	975 aa		10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	NFXL1	Q6ZNB6	911 aa		10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	ARHGAP27	Q6ZUM4	889 aa		10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	GTF3C6	Q969F1	213 aa		10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	LLPH	Q9BRT6	129 aa	Known RBP	10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	UBAC1	Q9BSL1	405 aa		10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	INCENP	Q9NQS7	918 aa		10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	SERPINA10	Q9UK55	444 aa		10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	HDAC9	Q9UKV0	1011 aa		10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	NAV1	Q8NEY1	1877 aa		10.63	□□□□□ -0.71
KIFC1-213	ENST00000486695	FER1L6	Q2WGJ9	1857 aa		10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	CCDC69	A6NI79	296 aa		10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	YDJC	A8MPS7	323 aa		10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	ORC4	O43929	436 aa		10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	RANBP6	O60518	1105 aa	Known RBP	10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	FGR	P09769	529 aa		10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	CYP2D6	P10635	497 aa		10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	PDIA3	P30101	505 aa	Known RBP	10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	LIFR	P42702	1097 aa		10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	WTAP	Q15007	396 aa		10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	TTC6	Q86TZ1	520 aa		10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	IQCA1	Q86XH1	822 aa		10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	ZDHHC15	Q96MV8	337 aa		10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	GBP4	Q96PP9	640 aa		10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	MKNK2	Q9HBH9	465 aa		10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	MKRN1	Q9UHC7	482 aa	Known RBP	10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	SAP30BP	Q9UHR5	308 aa	Known RBP	10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	SCN9A	Q15858	1988 aa		10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	PSME4	Q14997	1843 aa		10.62	□□□□□ -0.71
KIFC1-213	ENST00000486695	CDK5RAP2	Q96SN8	1893 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	FLT1	P17948	1338 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	WDR33	Q9C0J8	1336 aa	Known RBP	10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	LTBP3	Q9NS15	1303 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	MYH1	P12882	1939 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	GOLGA8B	A8MQT2	603 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	RAD17	O75943	681 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	VIL1	P09327	827 aa	Known RBP	10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	PDC	P20941	246 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	GJB2	P29033	226 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	PICALM	Q13492	652 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	TNIP1	Q15025	636 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	CCDC178	Q5BJE1	867 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	CDC42EP5	Q6NZY7	148 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	OGFOD1	Q8N543	542 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	IGDCC4	Q8TDY8	1250 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	BRPF3	Q9ULD4	1205 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	KIF3A	Q9Y496	699 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	TACC3	Q9Y6A5	838 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	ZNF646	O15015	1829 aa	Predicted RBP	10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	FOCAD	Q5VW36	1801 aa		10.61	□□□□□ -0.71
KIFC1-213	ENST00000486695	TSPY2	A6NKD2	308 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	PSMD14	O00487	310 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	CPLX1	O14810	134 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	ZBTB43	O43298	467 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	PRDM1	O75626	825 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	TOMM70	O94826	608 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	CCT2	P78371	535 aa	Known RBP	10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	HMGN5	P82970	282 aa	Known RBP	10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	ST3GAL1	Q11201	340 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	SCRN1	Q12765	414 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	NFKBIB	Q15653	356 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	CIAPIN1	Q6FI81	312 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	APOBEC3H	Q6NTF7	200 aa	Known RBP	10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	CPLX2	Q6PUV4	134 aa	Known RBP	10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	SGMS1	Q86VZ5	419 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	FAM184A	Q8NB25	1140 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	AGBL3	Q8NEM8	1001 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	TNPO1	Q92973	898 aa	Known RBP	10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	ZKSCAN3	Q9BRR0	538 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	LY9	Q9HBG7	655 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	GPHN	Q9NQX3	736 aa	Predicted RBP	10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	SLC12A7	Q9Y666	1083 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	ECM29	Q5VYK3	1845 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	ARFGEF1	Q9Y6D6	1849 aa		10.6	□□□□□ -0.71
KIFC1-213	ENST00000486695	NFKBIE	O00221	500 aa		10.59	□□□□□ -0.71
KIFC1-213	ENST00000486695	CDKL5	O76039	1030 aa		10.59	□□□□□ -0.71
KIFC1-213	ENST00000486695	HLA-DOA	P06340	250 aa		10.59	□□□□□ -0.71
KIFC1-213	ENST00000486695	MMP14	P50281	582 aa		10.59	□□□□□ -0.71
KIFC1-213	ENST00000486695	METAP2	P50579	478 aa	Known RBP eCLIP	10.59	□□□□□ -0.71
KIFC1-213	ENST00000486695	APLP1	P51693	650 aa		10.59	□□□□□ -0.71
KIFC1-213	ENST00000486695	NBR1	Q14596	966 aa		10.59	□□□□□ -0.71
KIFC1-213	ENST00000486695	SLC4A8	Q2Y0W8	1093 aa		10.59	□□□□□ -0.71
KIFC1-213	ENST00000486695	CFAP100	Q494V2	611 aa		10.59	□□□□□ -0.71
KIFC1-213	ENST00000486695	LARP1B	Q659C4	914 aa	Known RBP	10.59	□□□□□ -0.71
KIFC1-213	ENST00000486695	TMOD2	Q9NZR1	351 aa		10.59	□□□□□ -0.71
KIFC1-213	ENST00000486695	ROBO3	Q96MS0	1386 aa		10.59	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms