RNA–Protein interactions for RNA: ENST00000486621.1

TTC4-204, Transcript of tetratricopeptide repeat domain 4, humanhuman

TSL 2

Gene TTC4, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4-204ENST00000486621 C2orf49Q9BVC5 232 aaPredicted RBP6.75□□□□□ -1.33
TTC4-204ENST00000486621 ALG2Q9H553 416 aa6.75□□□□□ -1.33
TTC4-204ENST00000486621 SRA1Q9HD15 236 aaKnown RBP6.75□□□□□ -1.33
TTC4-204ENST00000486621 ABCC6O95255 1503 aa6.75□□□□□ -1.33
TTC4-204ENST00000486621 RGPD5Q99666 1765 aa6.74□□□□□ -1.33
TTC4-204ENST00000486621 PIK3C2AO00443 1686 aa6.74□□□□□ -1.33
TTC4-204ENST00000486621 TNRC6CQ9HCJ0 1690 aaKnown RBP6.74□□□□□ -1.33
TTC4-204ENST00000486621 GLB1P16278 677 aa6.74□□□□□ -1.33
TTC4-204ENST00000486621 DPEP1P16444 411 aa6.74□□□□□ -1.33
TTC4-204ENST00000486621 CLDN10P78369 228 aa6.74□□□□□ -1.33
TTC4-204ENST00000486621 SMIM5Q71RC9 77 aa6.74□□□□□ -1.33
TTC4-204ENST00000486621 DTX1Q86Y01 620 aa6.74□□□□□ -1.33
TTC4-204ENST00000486621 DCAF11Q8TEB1 546 aa6.74□□□□□ -1.33
TTC4-204ENST00000486621 PIM2Q9P1W9 311 aa6.74□□□□□ -1.33
TTC4-204ENST00000486621 CPSF1Q10570 1443 aaKnown RBP6.74□□□□□ -1.33
TTC4-204ENST00000486621 LY75O60449 1722 aa6.73□□□□□ -1.33
TTC4-204ENST00000486621 ANKRD36BQ8N2N9 1353 aa6.73□□□□□ -1.33
TTC4-204ENST00000486621 MMP10P09238 476 aa6.73□□□□□ -1.33
TTC4-204ENST00000486621 RTN1Q16799 776 aa6.73□□□□□ -1.33
TTC4-204ENST00000486621 KRT25Q7Z3Z0 450 aa6.73□□□□□ -1.33
TTC4-204ENST00000486621 AGGF1Q8N302 714 aaeCLIP6.73□□□□□ -1.33
TTC4-204ENST00000486621 TSEN2Q8NCE0 465 aaKnown RBP6.73□□□□□ -1.33
TTC4-204ENST00000486621 IFT43Q96FT9 208 aa6.73□□□□□ -1.33
TTC4-204ENST00000486621 KRTAP4-2Q9BYR5 136 aa6.73□□□□□ -1.33
TTC4-204ENST00000486621 N4BP2Q86UW6 1770 aaPredicted RBP6.72□□□□□ -1.33
TTC4-204ENST00000486621 TMEM88BA6NKF7 163 aa6.72□□□□□ -1.33
TTC4-204ENST00000486621 DHX15O43143 795 aaKnown RBP6.72□□□□□ -1.33
TTC4-204ENST00000486621 RARAP10276 462 aa6.72□□□□□ -1.33
TTC4-204ENST00000486621 EIF2AK2P19525 551 aaKnown RBP6.72□□□□□ -1.33
TTC4-204ENST00000486621 TARSP26639 723 aaKnown RBP6.72□□□□□ -1.33
TTC4-204ENST00000486621 SSFA2P28290 1259 aa6.72□□□□□ -1.33
TTC4-204ENST00000486621 NRLP54845 237 aa6.72□□□□□ -1.33
TTC4-204ENST00000486621 NFIAQ12857 509 aa6.72□□□□□ -1.33
TTC4-204ENST00000486621 DALRD3Q5D0E6 543 aaKnown RBP6.72□□□□□ -1.33
TTC4-204ENST00000486621 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.72□□□□□ -1.33
TTC4-204ENST00000486621 MAP4K3Q8IVH8 894 aa6.72□□□□□ -1.33
TTC4-204ENST00000486621 PLEKHM2Q8IWE5 1019 aa6.72□□□□□ -1.33
TTC4-204ENST00000486621 LARGE2Q8N3Y3 721 aa6.72□□□□□ -1.33
TTC4-204ENST00000486621 GCC1Q96CN9 775 aa6.72□□□□□ -1.33
TTC4-204ENST00000486621 UBL7Q96S82 380 aaPredicted RBP6.72□□□□□ -1.33
TTC4-204ENST00000486621 C11orf16Q9NQ32 467 aa6.72□□□□□ -1.33
TTC4-204ENST00000486621 CCDC87Q9NVE4 849 aa6.72□□□□□ -1.33
TTC4-204ENST00000486621 ADGRE2Q9UHX3 823 aa6.72□□□□□ -1.33
TTC4-204ENST00000486621 SLIT3O75094 1523 aa6.71□□□□□ -1.33
TTC4-204ENST00000486621 SBF1O95248 1867 aa6.71□□□□□ -1.34
TTC4-204ENST00000486621 NSD3Q9BZ95 1437 aa6.71□□□□□ -1.34
TTC4-204ENST00000486621 LOC105371045A0A1W2PR82 267 aa6.71□□□□□ -1.34
TTC4-204ENST00000486621 WNT11O96014 354 aa6.71□□□□□ -1.34
TTC4-204ENST00000486621 KCNA3P22001 575 aa6.71□□□□□ -1.34
TTC4-204ENST00000486621 ARID4AP29374 1257 aaPredicted RBP6.71□□□□□ -1.34
TTC4-204ENST00000486621 INPP5BP32019 993 aa6.71□□□□□ -1.34
TTC4-204ENST00000486621 SRPK2P78362 688 aaKnown RBP6.71□□□□□ -1.34
TTC4-204ENST00000486621 SETDB1Q15047 1291 aa6.71□□□□□ -1.34
TTC4-204ENST00000486621 DEFB115Q30KQ5 88 aa6.71□□□□□ -1.34
TTC4-204ENST00000486621 HFE2Q6ZVN8 426 aa6.71□□□□□ -1.34
TTC4-204ENST00000486621 GAS2L2Q8NHY3 880 aa6.71□□□□□ -1.34
TTC4-204ENST00000486621 MCOLN1Q9GZU1 580 aa6.71□□□□□ -1.34
TTC4-204ENST00000486621 PKD1L3Q7Z443 1732 aa6.7□□□□□ -1.34
TTC4-204ENST00000486621 PALM3A6NDB9 673 aaPredicted RBP6.7□□□□□ -1.34
TTC4-204ENST00000486621 PRR19A6NJB7 356 aa6.7□□□□□ -1.34
TTC4-204ENST00000486621 SASH3O75995 380 aa6.7□□□□□ -1.34
TTC4-204ENST00000486621 LMNB1P20700 586 aa6.7□□□□□ -1.34
TTC4-204ENST00000486621 IDH3AP50213 366 aa6.7□□□□□ -1.34
TTC4-204ENST00000486621 SIX5Q8N196 739 aa6.7□□□□□ -1.34
TTC4-204ENST00000486621 ARMC10Q8N2F6 343 aa6.7□□□□□ -1.34
TTC4-204ENST00000486621 NLGN1Q8N2Q7 840 aa6.7□□□□□ -1.34
TTC4-204ENST00000486621 OGFOD1Q8N543 542 aa6.7□□□□□ -1.34
TTC4-204ENST00000486621 IL22RA1Q8N6P7 574 aa6.7□□□□□ -1.34
TTC4-204ENST00000486621 SCG3Q8WXD2 468 aaKnown RBP6.7□□□□□ -1.34
TTC4-204ENST00000486621 PLD4Q96BZ4 506 aa6.7□□□□□ -1.34
TTC4-204ENST00000486621 TNRC18O15417 2968 aaPredicted RBP6.7□□□□□ -1.34
TTC4-204ENST00000486621 WDR33Q9C0J8 1336 aaKnown RBP6.7□□□□□ -1.34
TTC4-204ENST00000486621 NSD2O96028 1365 aa6.69□□□□□ -1.34
TTC4-204ENST00000486621 USP17L3A6NCW0 530 aa6.69□□□□□ -1.34
TTC4-204ENST00000486621 USP17L4A6NCW7 530 aa6.69□□□□□ -1.34
TTC4-204ENST00000486621 TMF1P82094 1093 aa6.69□□□□□ -1.34
TTC4-204ENST00000486621 GDF6Q6KF10 455 aaPredicted RBP6.69□□□□□ -1.34
TTC4-204ENST00000486621 USP17L2Q6R6M4 530 aa6.69□□□□□ -1.34
TTC4-204ENST00000486621 USP17L1Q7RTZ2 530 aa6.69□□□□□ -1.34
TTC4-204ENST00000486621 AMIGO3Q86WK7 504 aa6.69□□□□□ -1.34
TTC4-204ENST00000486621 ZCRB1Q8TBF4 217 aaKnown RBP6.69□□□□□ -1.34
TTC4-204ENST00000486621 ANKRD24Q8TF21 1146 aa6.69□□□□□ -1.34
TTC4-204ENST00000486621 ADGRB1O14514 1584 aa6.69□□□□□ -1.34
TTC4-204ENST00000486621 VIRMAQ69YN4 1812 aaKnown RBP6.69□□□□□ -1.34
TTC4-204ENST00000486621 KIF13BQ9NQT8 1826 aa6.69□□□□□ -1.34
TTC4-204ENST00000486621 ARFGEF1Q9Y6D6 1849 aa6.69□□□□□ -1.34
TTC4-204ENST00000486621 ARSDP51689 593 aa6.68□□□□□ -1.34
TTC4-204ENST00000486621 UVSSAQ2YD98 709 aa6.68□□□□□ -1.34
TTC4-204ENST00000486621 RNF43Q68DV7 783 aa6.68□□□□□ -1.34
TTC4-204ENST00000486621 SMARCC1Q92922 1105 aaPredicted RBP6.68□□□□□ -1.34
TTC4-204ENST00000486621 DBNDD2Q9BQY9 259 aa6.68□□□□□ -1.34
TTC4-204ENST00000486621 CEP41Q9BYV8 373 aa6.68□□□□□ -1.34
TTC4-204ENST00000486621 C7orf69Q9H7B7 122 aa6.68□□□□□ -1.34
TTC4-204ENST00000486621 TLR7Q9NYK1 1049 aaKnown RBP6.68□□□□□ -1.34
TTC4-204ENST00000486621 PASKQ96RG2 1323 aa6.68□□□□□ -1.34
TTC4-204ENST00000486621 USP54Q70EL1 1684 aa6.68□□□□□ -1.34
TTC4-204ENST00000486621 RASSF10A6NK89 507 aa6.67□□□□□ -1.34
TTC4-204ENST00000486621 DKK1O94907 266 aa6.67□□□□□ -1.34
TTC4-204ENST00000486621 DGKZQ13574 1117 aa6.67□□□□□ -1.34
TTC4-204ENST00000486621 OGFOD2Q6N063 350 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms