RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 CCDC84Q86UT8 332 aaPredicted RBP13.38□□□□□ -0.27
SNX21-211ENST00000486336 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.38□□□□□ -0.27
SNX21-211ENST00000486336 ZNF532Q9HCE3 1301 aa13.38□□□□□ -0.27
SNX21-211ENST00000486336 MAST2Q6P0Q8 1798 aa13.37□□□□□ -0.27
SNX21-211ENST00000486336 CXCL11O14625 94 aa13.37□□□□□ -0.27
SNX21-211ENST00000486336 SP3Q02447 781 aa13.37□□□□□ -0.27
SNX21-211ENST00000486336 GADL1Q6ZQY3 521 aa13.37□□□□□ -0.27
SNX21-211ENST00000486336 CERS3Q8IU89 383 aa13.37□□□□□ -0.27
SNX21-211ENST00000486336 CD99L2Q8TCZ2 262 aa13.37□□□□□ -0.27
SNX21-211ENST00000486336 GPATCH3Q96I76 525 aa13.37□□□□□ -0.27
SNX21-211ENST00000486336 HAUS7Q99871 368 aa13.37□□□□□ -0.27
SNX21-211ENST00000486336 ZBTB47Q9UFB7 747 aaPredicted RBP13.37□□□□□ -0.27
SNX21-211ENST00000486336 HERC5Q9UII4 1024 aaKnown RBP13.37□□□□□ -0.27
SNX21-211ENST00000486336 KCNH4Q9UQ05 1017 aa13.37□□□□□ -0.27
SNX21-211ENST00000486336 TRIM75PA6NK02 468 aa13.36□□□□□ -0.27
SNX21-211ENST00000486336 PDHXO00330 501 aa13.36□□□□□ -0.27
SNX21-211ENST00000486336 ECM2O94769 699 aaPredicted RBP13.36□□□□□ -0.27
SNX21-211ENST00000486336 PKN2Q16513 984 aaKnown RBP13.36□□□□□ -0.27
SNX21-211ENST00000486336 TMED8Q6PL24 325 aaPredicted RBP13.36□□□□□ -0.27
SNX21-211ENST00000486336 FOXP4Q8IVH2 680 aaPredicted RBP13.36□□□□□ -0.27
SNX21-211ENST00000486336 ERO1AQ96HE7 468 aa13.36□□□□□ -0.27
SNX21-211ENST00000486336 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.36□□□□□ -0.27
SNX21-211ENST00000486336 ECHDC1Q9NTX5 307 aa13.36□□□□□ -0.27
SNX21-211ENST00000486336 AFG3L2Q9Y4W6 797 aa13.36□□□□□ -0.27
SNX21-211ENST00000486336 TRIM17Q9Y577 477 aa13.36□□□□□ -0.27
SNX21-211ENST00000486336 POLR3DP05423 398 aaPredicted RBP13.35□□□□□ -0.27
SNX21-211ENST00000486336 CAP2P40123 477 aa13.35□□□□□ -0.27
SNX21-211ENST00000486336 RRP1BQ14684 758 aaKnown RBP13.35□□□□□ -0.27
SNX21-211ENST00000486336 SLFNL1Q499Z3 407 aa13.35□□□□□ -0.27
SNX21-211ENST00000486336 TSHZ3Q63HK5 1081 aa13.35□□□□□ -0.27
SNX21-211ENST00000486336 FASTKD5Q7L8L6 764 aaKnown RBP13.35□□□□□ -0.27
SNX21-211ENST00000486336 ANKRD23Q86SG2 305 aa13.35□□□□□ -0.27
SNX21-211ENST00000486336 CRNKL1Q9BZJ0 848 aaKnown RBP13.35□□□□□ -0.27
SNX21-211ENST00000486336 COL2A1P02458 1487 aaPredicted RBP13.35□□□□□ -0.27
SNX21-211ENST00000486336 ANKRD45Q5TZF3 282 aa13.34□□□□□ -0.27
SNX21-211ENST00000486336 RIOK1Q9BRS2 568 aaKnown RBP13.34□□□□□ -0.27
SNX21-211ENST00000486336 ARMT1Q9H993 441 aa13.34□□□□□ -0.27
SNX21-211ENST00000486336 EFCC1Q9HA90 598 aa13.34□□□□□ -0.27
SNX21-211ENST00000486336 ZCCHC17Q9NP64 241 aaKnown RBP13.34□□□□□ -0.27
SNX21-211ENST00000486336 CPA4Q9UI42 421 aa13.34□□□□□ -0.27
SNX21-211ENST00000486336 A0A0G2JLL6 359 aaPredicted RBP13.33□□□□□ -0.28
SNX21-211ENST00000486336 TCRBV5S4A2TA0A5A2 114 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 USP17L5A8MUK1 530 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 TLR2O60603 784 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 MBD4O95243 580 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 GDF11O95390 407 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 ADD2P35612 726 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 SPP2Q13103 211 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 MOGSQ13724 837 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 KIF22Q14807 665 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 ARHGEF6Q15052 776 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 ZSCAN25Q6NSZ9 544 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 GPAT2Q6NUI2 795 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 FBXO46Q6PJ61 603 aaPredicted RBP13.33□□□□□ -0.28
SNX21-211ENST00000486336 OTOP1Q7RTM1 612 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 PRRT2Q7Z6L0 340 aaPredicted RBP13.33□□□□□ -0.28
SNX21-211ENST00000486336 TTC6Q86TZ1 520 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 LCORLQ8N3X6 602 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 MCM9Q9NXL9 1143 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 HPS5Q9UPZ3 1129 aa13.33□□□□□ -0.28
SNX21-211ENST00000486336 LAMB1P07942 1786 aa13.32□□□□□ -0.28
SNX21-211ENST00000486336 CHGBP05060 677 aa13.32□□□□□ -0.28
SNX21-211ENST00000486336 CYP2C8P10632 490 aa13.32□□□□□ -0.28
SNX21-211ENST00000486336 ZNF280CQ8ND82 737 aa13.32□□□□□ -0.28
SNX21-211ENST00000486336 SDR42E1Q8WUS8 393 aa13.32□□□□□ -0.28
SNX21-211ENST00000486336 PARK7Q99497 189 aaKnown RBP13.32□□□□□ -0.28
SNX21-211ENST00000486336 DNAJC18Q9H819 358 aa13.32□□□□□ -0.28
SNX21-211ENST00000486336 AS3MTQ9HBK9 375 aa13.32□□□□□ -0.28
SNX21-211ENST00000486336 SUPT16HQ9Y5B9 1047 aaKnown RBP13.32□□□□□ -0.28
SNX21-211ENST00000486336 DOCK1Q14185 1865 aa13.31□□□□□ -0.28
SNX21-211ENST00000486336 CDK5RAP2Q96SN8 1893 aa13.31□□□□□ -0.28
SNX21-211ENST00000486336 PRKAB2O43741 272 aa13.31□□□□□ -0.28
SNX21-211ENST00000486336 ASNSP08243 561 aa13.31□□□□□ -0.28
SNX21-211ENST00000486336 PLCD1P51178 756 aa13.31□□□□□ -0.28
SNX21-211ENST00000486336 HMGCS2P54868 508 aa13.31□□□□□ -0.28
SNX21-211ENST00000486336 UBE3CQ15386 1083 aa13.31□□□□□ -0.28
SNX21-211ENST00000486336 SHROOM1Q2M3G4 852 aaPredicted RBP13.31□□□□□ -0.28
SNX21-211ENST00000486336 EXOC6Q8TAG9 804 aa13.31□□□□□ -0.28
SNX21-211ENST00000486336 OTUD7AQ8TE49 926 aaPredicted RBP13.31□□□□□ -0.28
SNX21-211ENST00000486336 SERPINB13Q9UIV8 391 aa13.31□□□□□ -0.28
SNX21-211ENST00000486336 MYH1P12882 1939 aa13.31□□□□□ -0.28
SNX21-211ENST00000486336 ERC2O15083 957 aa13.3□□□□□ -0.28
SNX21-211ENST00000486336 SOX10P56693 466 aa13.3□□□□□ -0.28
SNX21-211ENST00000486336 JAG1P78504 1218 aa13.3□□□□□ -0.28
SNX21-211ENST00000486336 CERKLQ49MI3 558 aaPredicted RBP13.3□□□□□ -0.28
SNX21-211ENST00000486336 C17orf99Q6UX52 265 aa13.3□□□□□ -0.28
SNX21-211ENST00000486336 METTL16Q86W50 562 aaKnown RBP13.3□□□□□ -0.28
SNX21-211ENST00000486336 TBC1D2Q9BYX2 928 aa13.3□□□□□ -0.28
SNX21-211ENST00000486336 ARHGAP39Q9C0H5 1083 aa13.3□□□□□ -0.28
SNX21-211ENST00000486336 DCP1AQ9NPI6 582 aaPredicted RBP13.3□□□□□ -0.28
SNX21-211ENST00000486336 PTPN22Q9Y2R2 807 aa13.3□□□□□ -0.28
SNX21-211ENST00000486336 SLC4A4Q9Y6R1 1079 aa13.3□□□□□ -0.28
SNX21-211ENST00000486336 FOCADQ5VW36 1801 aa13.29□□□□□ -0.28
SNX21-211ENST00000486336 GH2P01242 217 aa13.29□□□□□ -0.28
SNX21-211ENST00000486336 CYP2D6P10635 497 aa13.29□□□□□ -0.28
SNX21-211ENST00000486336 LACTBP83111 547 aaPredicted RBP13.29□□□□□ -0.28
SNX21-211ENST00000486336 CAP1Q01518 475 aa13.29□□□□□ -0.28
SNX21-211ENST00000486336 HDAC1Q13547 482 aaPredicted RBP13.29□□□□□ -0.28
SNX21-211ENST00000486336 RAB3GAP1Q15042 981 aa13.29□□□□□ -0.28
SNX21-211ENST00000486336 TREML2Q5T2D2 321 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms