RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 ZAP70P43403 619 aa27.46■■□□□ 1.99
SREBF1-214ENST00000486311 CCDC84Q86UT8 332 aaPredicted RBP27.46■■□□□ 1.99
SREBF1-214ENST00000486311 EAF2Q96CJ1 260 aaPredicted RBP27.46■■□□□ 1.99
SREBF1-214ENST00000486311 TLR7Q9NYK1 1049 aaKnown RBP27.46■■□□□ 1.99
SREBF1-214ENST00000486311 KIAA0100Q14667 2235 aaKnown RBP27.46■■□□□ 1.99
SREBF1-214ENST00000486311 FMNL1O95466 1100 aaPredicted RBP27.45■■□□□ 1.98
SREBF1-214ENST00000486311 PANK1Q8TE04 598 aa27.45■■□□□ 1.98
SREBF1-214ENST00000486311 CCDC8Q9H0W5 538 aaPredicted RBP27.45■■□□□ 1.98
SREBF1-214ENST00000486311 PCDH10Q9P2E7 1040 aa27.45■■□□□ 1.98
SREBF1-214ENST00000486311 HERC5Q9UII4 1024 aaKnown RBP27.45■■□□□ 1.98
SREBF1-214ENST00000486311 ADGRA1Q86SQ6 560 aa27.44■■□□□ 1.98
SREBF1-214ENST00000486311 DHX36Q9H2U1 1008 aaKnown RBP27.44■■□□□ 1.98
SREBF1-214ENST00000486311 PIH1D3Q9NQM4 214 aaKnown RBP27.44■■□□□ 1.98
SREBF1-214ENST00000486311 CAP2P40123 477 aa27.43■■□□□ 1.98
SREBF1-214ENST00000486311 SLC4A8Q2Y0W8 1093 aa27.43■■□□□ 1.98
SREBF1-214ENST00000486311 TBC1D2Q9BYX2 928 aa27.43■■□□□ 1.98
SREBF1-214ENST00000486311 PI4KBQ9UBF8 816 aa27.43■■□□□ 1.98
SREBF1-214ENST00000486311 AGTPBP1Q9UPW5 1226 aa27.43■■□□□ 1.98
SREBF1-214ENST00000486311 ZSWIM8A7E2V4 1837 aa27.43■■□□□ 1.98
SREBF1-214ENST00000486311 FCGRTP55899 365 aa27.42■■□□□ 1.98
SREBF1-214ENST00000486311 RRP1BQ14684 758 aaKnown RBP27.42■■□□□ 1.98
SREBF1-214ENST00000486311 MYPNQ86TC9 1320 aa27.41■■□□□ 1.98
SREBF1-214ENST00000486311 DOCK1Q14185 1865 aa27.41■■□□□ 1.98
SREBF1-214ENST00000486311 ERC1Q8IUD2 1116 aa27.41■■□□□ 1.98
SREBF1-214ENST00000486311 ZNF280CQ8ND82 737 aa27.41■■□□□ 1.98
SREBF1-214ENST00000486311 RAET1EQ8TD07 263 aa27.41■■□□□ 1.98
SREBF1-214ENST00000486311 TGFBRAP1Q8WUH2 860 aa27.41■■□□□ 1.98
SREBF1-214ENST00000486311 FLT1P17948 1338 aa27.41■■□□□ 1.98
SREBF1-214ENST00000486311 MYCP01106 439 aaPredicted RBP27.4■■□□□ 1.98
SREBF1-214ENST00000486311 MS4A1P11836 297 aa27.4■■□□□ 1.98
SREBF1-214ENST00000486311 SPP2Q13103 211 aa27.4■■□□□ 1.98
SREBF1-214ENST00000486311 MAPKAPK5Q8IW41 473 aa27.4■■□□□ 1.98
SREBF1-214ENST00000486311 PROCA1Q8NCQ7 364 aaPredicted RBP27.4■■□□□ 1.98
SREBF1-214ENST00000486311 EXOC6BQ9Y2D4 811 aa27.4■■□□□ 1.98
SREBF1-214ENST00000486311 TREML2Q5T2D2 321 aa27.39■■□□□ 1.98
SREBF1-214ENST00000486311 METTL16Q86W50 562 aaKnown RBP27.39■■□□□ 1.98
SREBF1-214ENST00000486311 SMCR8Q8TEV9 937 aaPredicted RBP27.39■■□□□ 1.98
SREBF1-214ENST00000486311 MAST2Q6P0Q8 1798 aa27.38■■□□□ 1.97
SREBF1-214ENST00000486311 USP17L5A8MUK1 530 aa27.38■■□□□ 1.97
SREBF1-214ENST00000486311 GRK4P32298 578 aa27.38■■□□□ 1.97
SREBF1-214ENST00000486311 PRKCZQ05513 592 aa27.38■■□□□ 1.97
SREBF1-214ENST00000486311 CYP7A1P22680 504 aa27.37■■□□□ 1.97
SREBF1-214ENST00000486311 HSP90AB4PQ58FF6 505 aa27.37■■□□□ 1.97
SREBF1-214ENST00000486311 AACSQ86V21 672 aa27.37■■□□□ 1.97
SREBF1-214ENST00000486311 FOXP4Q8IVH2 680 aaPredicted RBP27.37■■□□□ 1.97
SREBF1-214ENST00000486311 PNMA3Q9UL41 463 aa27.37■■□□□ 1.97
SREBF1-214ENST00000486311 PHIPQ8WWQ0 1821 aa27.37■■□□□ 1.97
SREBF1-214ENST00000486311 IDH1O75874 414 aaKnown RBP27.36■■□□□ 1.97
SREBF1-214ENST00000486311 DYNLL1P63167 89 aaKnown RBP27.36■■□□□ 1.97
SREBF1-214ENST00000486311 MTFR1Q15390 333 aa27.36■■□□□ 1.97
SREBF1-214ENST00000486311 DNAJC18Q9H819 358 aa27.36■■□□□ 1.97
SREBF1-214ENST00000486311 AS3MTQ9HBK9 375 aa27.36■■□□□ 1.97
SREBF1-214ENST00000486311 HMGCS2P54868 508 aa27.35■■□□□ 1.97
SREBF1-214ENST00000486311 SH3D19Q5HYK7 790 aa27.35■■□□□ 1.97
SREBF1-214ENST00000486311 WDR18Q9BV38 432 aa27.35■■□□□ 1.97
SREBF1-214ENST00000486311 PALD1Q9ULE6 856 aa27.35■■□□□ 1.97
SREBF1-214ENST00000486311 ASNSP08243 561 aa27.34■■□□□ 1.97
SREBF1-214ENST00000486311 PABPC4Q13310 644 aaKnown RBP eCLIP27.34■■□□□ 1.971e-6■□□□□ 9.5
SREBF1-214ENST00000486311 TMED8Q6PL24 325 aaPredicted RBP27.34■■□□□ 1.97
SREBF1-214ENST00000486311 CERS3Q8IU89 383 aa27.34■■□□□ 1.97
SREBF1-214ENST00000486311 GABRQQ9UN88 632 aa27.34■■□□□ 1.97
SREBF1-214ENST00000486311 NDUFB9Q9Y6M9 179 aa27.34■■□□□ 1.97
SREBF1-214ENST00000486311 FAM110CQ1W6H9 321 aa27.33■■□□□ 1.97
SREBF1-214ENST00000486311 RPAP2Q8IXW5 612 aaPredicted RBP27.33■■□□□ 1.97
SREBF1-214ENST00000486311 CRACR2BQ8N4Y2 399 aaPredicted RBP27.33■■□□□ 1.97
SREBF1-214ENST00000486311 ANKRD13CQ8N6S4 541 aa27.33■■□□□ 1.97
SREBF1-214ENST00000486311 MAGEB6Q8N7X4 407 aa27.33■■□□□ 1.97
SREBF1-214ENST00000486311 SLAIN1Q8ND83 568 aa27.33■■□□□ 1.97
SREBF1-214ENST00000486311 RHPN1Q8TCX5 695 aa27.33■■□□□ 1.97
SREBF1-214ENST00000486311 GCC1Q96CN9 775 aa27.33■■□□□ 1.97
SREBF1-214ENST00000486311 ANTXR1Q9H6X2 564 aa27.33■■□□□ 1.97
SREBF1-214ENST00000486311 GINM1Q9NU53 330 aa27.33■■□□□ 1.97
SREBF1-214ENST00000486311 PTPRFP10586 1907 aa27.32■■□□□ 1.96
SREBF1-214ENST00000486311 HLA-DOAP06340 250 aa27.32■■□□□ 1.96
SREBF1-214ENST00000486311 JAG1P78504 1218 aa27.32■■□□□ 1.96
SREBF1-214ENST00000486311 MAP3K12Q12852 859 aa27.32■■□□□ 1.96
SREBF1-214ENST00000486311 MIGA1Q8NAN2 632 aa27.32■■□□□ 1.96
SREBF1-214ENST00000486311 TRIM34Q9BYJ4 488 aa27.32■■□□□ 1.96
SREBF1-214ENST00000486311 IL1RAPL2Q9NP60 686 aa27.32■■□□□ 1.96
SREBF1-214ENST00000486311 SAP30BPQ9UHR5 308 aaKnown RBP27.32■■□□□ 1.96
SREBF1-214ENST00000486311 DDX19BQ9UMR2 479 aa27.32■■□□□ 1.96
SREBF1-214ENST00000486311 TNPO2O14787 897 aaKnown RBP27.31■■□□□ 1.96
SREBF1-214ENST00000486311 GCLCP48506 637 aaPredicted RBP27.31■■□□□ 1.96
SREBF1-214ENST00000486311 UBXN2AP68543 259 aa27.31■■□□□ 1.96
SREBF1-214ENST00000486311 ZBTB40Q9NUA8 1239 aa27.31■■□□□ 1.96
SREBF1-214ENST00000486311 CCL5P13501 91 aa27.3■■□□□ 1.96
SREBF1-214ENST00000486311 FLT3LGP49771 235 aa27.3■■□□□ 1.96
SREBF1-214ENST00000486311 BACE1P56817 501 aa27.3■■□□□ 1.96
SREBF1-214ENST00000486311 SHISA4Q96DD7 197 aa27.3■■□□□ 1.96
SREBF1-214ENST00000486311 BIN2Q9UBW5 565 aaPredicted RBP27.3■■□□□ 1.96
SREBF1-214ENST00000486311 COG6Q9Y2V7 657 aa27.3■■□□□ 1.96
SREBF1-214ENST00000486311 HMMRO75330 724 aa27.29■■□□□ 1.96
SREBF1-214ENST00000486311 IRF5Q13568 498 aa27.29■■□□□ 1.96
SREBF1-214ENST00000486311 MTMR2Q13614 643 aa27.29■■□□□ 1.96
SREBF1-214ENST00000486311 SIRT2Q8IXJ6 389 aa27.29■■□□□ 1.96
SREBF1-214ENST00000486311 NKX2-3Q8TAU0 364 aa27.29■■□□□ 1.96
SREBF1-214ENST00000486311 KIF1BPQ96EK5 621 aa27.29■■□□□ 1.96
SREBF1-214ENST00000486311 ASCC2Q9H1I8 757 aaPredicted RBP27.29■■□□□ 1.96
SREBF1-214ENST00000486311 ZBTB21Q9ULJ3 1066 aa27.29■■□□□ 1.96
SREBF1-214ENST00000486311 SIPA1L1O43166 1804 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms