RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 TBC1D32Q96NH3 1257 aa16.46■□□□□ 0.23
NELFCD-209ENST00000486263 CSRNP1Q96S65 589 aa16.46■□□□□ 0.23
NELFCD-209ENST00000486263 TMEM39BQ9GZU3 492 aa16.46■□□□□ 0.23
NELFCD-209ENST00000486263 PI4KBQ9UBF8 816 aa16.46■□□□□ 0.23
NELFCD-209ENST00000486263 ANAPC4Q9UJX5 808 aa16.46■□□□□ 0.23
NELFCD-209ENST00000486263 SCAF8Q9UPN6 1271 aaKnown RBP16.46■□□□□ 0.23
NELFCD-209ENST00000486263 PPP2R3BQ9Y5P8 575 aa16.46■□□□□ 0.23
NELFCD-209ENST00000486263 NAV1Q8NEY1 1877 aa16.46■□□□□ 0.22
NELFCD-209ENST00000486263 DDTLA6NHG4 134 aaPredicted RBP16.45■□□□□ 0.22
NELFCD-209ENST00000486263 PSMA5P28066 241 aa16.45■□□□□ 0.22
NELFCD-209ENST00000486263 RBM25P49756 843 aaKnown RBP16.45■□□□□ 0.22
NELFCD-209ENST00000486263 PLCD1P51178 756 aa16.45■□□□□ 0.22
NELFCD-209ENST00000486263 ANAPC15P60006 121 aa16.45■□□□□ 0.22
NELFCD-209ENST00000486263 AKNAD1Q5T1N1 836 aa16.45■□□□□ 0.22
NELFCD-209ENST00000486263 KRT26Q7Z3Y9 468 aa16.45■□□□□ 0.22
NELFCD-209ENST00000486263 RALYLQ86SE5 291 aaKnown RBP16.45■□□□□ 0.22
NELFCD-209ENST00000486263 FOXP4Q8IVH2 680 aaPredicted RBP16.45■□□□□ 0.22
NELFCD-209ENST00000486263 JMYQ8N9B5 988 aa16.45■□□□□ 0.22
NELFCD-209ENST00000486263 HOOK2Q96ED9 719 aa16.45■□□□□ 0.22
NELFCD-209ENST00000486263 MKNK2Q9HBH9 465 aa16.45■□□□□ 0.22
NELFCD-209ENST00000486263 SNX14Q9Y5W7 946 aa16.45■□□□□ 0.22
NELFCD-209ENST00000486263 CNTNAP1P78357 1384 aa16.45■□□□□ 0.22
NELFCD-209ENST00000486263 COL2A1P02458 1487 aaPredicted RBP16.44■□□□□ 0.22
NELFCD-209ENST00000486263 E7EWF7 191 aa16.44■□□□□ 0.22
NELFCD-209ENST00000486263 RRP12Q5JTH9 1297 aaKnown RBP16.44■□□□□ 0.22
NELFCD-209ENST00000486263 CNNM2Q9H8M5 875 aa16.44■□□□□ 0.22
NELFCD-209ENST00000486263 SWAP70Q9UH65 585 aa16.44■□□□□ 0.22
NELFCD-209ENST00000486263 SERPINB13Q9UIV8 391 aa16.44■□□□□ 0.22
NELFCD-209ENST00000486263 BAZ2AQ9UIF9 1905 aaKnown RBP16.44■□□□□ 0.22
NELFCD-209ENST00000486263 CDK5RAP2Q96SN8 1893 aa16.44■□□□□ 0.22
NELFCD-209ENST00000486263 MYH1P12882 1939 aa16.43■□□□□ 0.22
NELFCD-209ENST00000486263 FOCADQ5VW36 1801 aa16.43■□□□□ 0.22
NELFCD-209ENST00000486263 ATRNL1Q5VV63 1379 aa16.43■□□□□ 0.22
NELFCD-209ENST00000486263 PCP11498 1178 aaKnown RBP16.43■□□□□ 0.22
NELFCD-209ENST00000486263 TSGA10IPQ3SY00 556 aa16.43■□□□□ 0.22
NELFCD-209ENST00000486263 SUPT20HL1Q3ZLR7 823 aa16.43■□□□□ 0.22
NELFCD-209ENST00000486263 SH3BP5LQ7L8J4 393 aa16.43■□□□□ 0.22
NELFCD-209ENST00000486263 USP48Q86UV5 1035 aa16.43■□□□□ 0.22
NELFCD-209ENST00000486263 RASEFQ8IZ41 740 aa16.43■□□□□ 0.22
NELFCD-209ENST00000486263 ZNF444Q8N0Y2 327 aaPredicted RBP16.43■□□□□ 0.22
NELFCD-209ENST00000486263 NCOA7Q8NI08 942 aa16.43■□□□□ 0.22
NELFCD-209ENST00000486263 STAG1Q8WVM7 1258 aa16.43■□□□□ 0.22
NELFCD-209ENST00000486263 KCNB2Q92953 911 aa16.43■□□□□ 0.22
NELFCD-209ENST00000486263 DYNLL2Q96FJ2 89 aa16.43■□□□□ 0.22
NELFCD-209ENST00000486263 JAKMIP1Q96N16 626 aaKnown RBP16.43■□□□□ 0.22
NELFCD-209ENST00000486263 NEK1Q96PY6 1258 aa16.43■□□□□ 0.22
NELFCD-209ENST00000486263 GLIS2Q9BZE0 524 aaPredicted RBP16.43■□□□□ 0.22
NELFCD-209ENST00000486263 KRT23Q9C075 422 aa16.43■□□□□ 0.22
NELFCD-209ENST00000486263 EHD4Q9H223 541 aa16.43■□□□□ 0.22
NELFCD-209ENST00000486263 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.43■□□□□ 0.22
NELFCD-209ENST00000486263 RASSF10A6NK89 507 aa16.42■□□□□ 0.22
NELFCD-209ENST00000486263 TRAF5O00463 557 aa16.42■□□□□ 0.22
NELFCD-209ENST00000486263 C16orf86Q6ZW13 317 aa16.42■□□□□ 0.22
NELFCD-209ENST00000486263 TBC1D10CQ8IV04 446 aa16.42■□□□□ 0.22
NELFCD-209ENST00000486263 HERC5Q9UII4 1024 aaKnown RBP16.42■□□□□ 0.22
NELFCD-209ENST00000486263 TAOK2Q9UL54 1235 aa16.42■□□□□ 0.22
NELFCD-209ENST00000486263 ADM5C9JUS6 153 aa16.41■□□□□ 0.22
NELFCD-209ENST00000486263 HMGB1P09429 215 aaKnown RBP16.41■□□□□ 0.22
NELFCD-209ENST00000486263 NF2P35240 595 aa16.41■□□□□ 0.22
NELFCD-209ENST00000486263 CDK8P49336 464 aa16.41■□□□□ 0.22
NELFCD-209ENST00000486263 EVX2Q03828 476 aa16.41■□□□□ 0.22
NELFCD-209ENST00000486263 CST9Q5W186 159 aa16.41■□□□□ 0.22
NELFCD-209ENST00000486263 DCAF15Q66K64 600 aa16.41■□□□□ 0.22
NELFCD-209ENST00000486263 ESR2Q92731 530 aa16.41■□□□□ 0.22
NELFCD-209ENST00000486263 ROBO3Q96MS0 1386 aa16.4■□□□□ 0.22
NELFCD-209ENST00000486263 SMIM22K7EJ46 135 aa16.4■□□□□ 0.22
NELFCD-209ENST00000486263 RANBP6O60518 1105 aaKnown RBP16.4■□□□□ 0.22
NELFCD-209ENST00000486263 PRDM1O75626 825 aa16.4■□□□□ 0.22
NELFCD-209ENST00000486263 CASTP20810 708 aaKnown RBP16.4■□□□□ 0.22
NELFCD-209ENST00000486263 NBPF12Q5TAG4 269 aaPredicted RBP16.4■□□□□ 0.22
NELFCD-209ENST00000486263 PRAMEF18Q5VWM3 479 aa16.4■□□□□ 0.22
NELFCD-209ENST00000486263 BLOC1S2Q6QNY1 142 aa16.4■□□□□ 0.22
NELFCD-209ENST00000486263 NBPF3Q9H094 633 aa16.4■□□□□ 0.22
NELFCD-209ENST00000486263 INCENPQ9NQS7 918 aa16.4■□□□□ 0.22
NELFCD-209ENST00000486263 CYP46A1Q9Y6A2 500 aa16.4■□□□□ 0.22
NELFCD-209ENST00000486263 TAF6LQ9Y6J9 622 aa16.4■□□□□ 0.22
NELFCD-209ENST00000486263 LAMB1P07942 1786 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 TSPY2A6NKD2 308 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 B4E1Z4 1266 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 ORC4O43929 436 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 TBC1D12O60347 775 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 CELF2O95319 508 aaKnown RBP16.39■□□□□ 0.21
NELFCD-209ENST00000486263 NT5C2P49902 561 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 GABPAQ06546 454 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 DEFB115Q30KQ5 88 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 ADCK5Q3MIX3 580 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 STOX1Q6ZVD7 989 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 MIGA2Q7L4E1 593 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 SLC44A5Q8NCS7 719 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 HHIPL1Q96JK4 782 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 TEPSINQ96N21 525 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 TM6SF1Q9BZW5 370 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 TLL2Q9Y6L7 1015 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 NEDD4P46934 1319 aa16.39■□□□□ 0.21
NELFCD-209ENST00000486263 DDX60LQ5H9U9 1706 aaKnown RBP16.39■□□□□ 0.21
NELFCD-209ENST00000486263 LAMA4Q16363 1823 aa16.38■□□□□ 0.21
NELFCD-209ENST00000486263 FAM196BA6NMK8 535 aa16.38■□□□□ 0.21
NELFCD-209ENST00000486263 MPHOSPH10O00566 681 aaKnown RBP16.38■□□□□ 0.21
NELFCD-209ENST00000486263 KDM4AO75164 1064 aa16.38■□□□□ 0.21
NELFCD-209ENST00000486263 TSPY3P0CV98 308 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms