RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 CNKSR2Q8WXI2 1034 aa15.69■□□□□ 0.1
SSR4-211ENST00000486204 DNAJC2Q99543 621 aaKnown RBP15.69■□□□□ 0.1
SSR4-211ENST00000486204 PAG1Q9NWQ8 432 aa15.69■□□□□ 0.1
SSR4-211ENST00000486204 RPAP1Q9BWH6 1393 aaPredicted RBP15.69■□□□□ 0.1
SSR4-211ENST00000486204 TLR2O60603 784 aa15.68■□□□□ 0.1
SSR4-211ENST00000486204 IDH1O75874 414 aaKnown RBP15.68■□□□□ 0.1
SSR4-211ENST00000486204 GJB1P08034 283 aa15.68■□□□□ 0.1
SSR4-211ENST00000486204 MX1P20591 662 aa15.68■□□□□ 0.1
SSR4-211ENST00000486204 BTDP43251 543 aa15.68■□□□□ 0.1
SSR4-211ENST00000486204 RHBDL3P58872 404 aa15.68■□□□□ 0.1
SSR4-211ENST00000486204 GSTO1P78417 241 aa15.68■□□□□ 0.1
SSR4-211ENST00000486204 NUCB1Q02818 461 aa15.68■□□□□ 0.1
SSR4-211ENST00000486204 FKBP1CQ5VVH2 108 aa15.68■□□□□ 0.1
SSR4-211ENST00000486204 B4GALNT3Q6L9W6 998 aa15.68■□□□□ 0.1
SSR4-211ENST00000486204 NAA16Q6N069 864 aaPredicted RBP15.68■□□□□ 0.1
SSR4-211ENST00000486204 CDAN1Q8IWY9 1227 aa15.68■□□□□ 0.1
SSR4-211ENST00000486204 TEPSINQ96N21 525 aa15.68■□□□□ 0.1
SSR4-211ENST00000486204 COL25A1Q9BXS0 654 aaPredicted RBP15.68■□□□□ 0.1
SSR4-211ENST00000486204 LNPKQ9C0E8 428 aa15.68■□□□□ 0.1
SSR4-211ENST00000486204 STAP2Q9UGK3 403 aa15.68■□□□□ 0.1
SSR4-211ENST00000486204 DOCK1Q14185 1865 aa15.67■□□□□ 0.1
SSR4-211ENST00000486204 TCP10L2B9ZVM9 353 aa15.67■□□□□ 0.1
SSR4-211ENST00000486204 EVI5O60447 810 aa15.67■□□□□ 0.1
SSR4-211ENST00000486204 ECM2O94769 699 aaPredicted RBP15.67■□□□□ 0.1
SSR4-211ENST00000486204 CCL5P13501 91 aa15.67■□□□□ 0.1
SSR4-211ENST00000486204 NFIAQ12857 509 aa15.67■□□□□ 0.1
SSR4-211ENST00000486204 TNFAIP1Q13829 316 aa15.67■□□□□ 0.1
SSR4-211ENST00000486204 TTF1Q15361 905 aaPredicted RBP15.67■□□□□ 0.1
SSR4-211ENST00000486204 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.67■□□□□ 0.1
SSR4-211ENST00000486204 CHD1LQ86WJ1 897 aa15.67■□□□□ 0.1
SSR4-211ENST00000486204 DEFB123Q8N688 67 aa15.67■□□□□ 0.1
SSR4-211ENST00000486204 GPATCH3Q96I76 525 aa15.67■□□□□ 0.1
SSR4-211ENST00000486204 RNF208Q9H0X6 261 aa15.67■□□□□ 0.1
SSR4-211ENST00000486204 PHIPQ8WWQ0 1821 aa15.66■□□□□ 0.1
SSR4-211ENST00000486204 LDHCP07864 332 aa15.66■□□□□ 0.1
SSR4-211ENST00000486204 HOXD10P28358 340 aa15.66■□□□□ 0.1
SSR4-211ENST00000486204 GRK4P32298 578 aa15.66■□□□□ 0.1
SSR4-211ENST00000486204 MAP3K12Q12852 859 aa15.66■□□□□ 0.1
SSR4-211ENST00000486204 GPR153Q6NV75 609 aa15.66■□□□□ 0.1
SSR4-211ENST00000486204 FAM83AQ86UY5 434 aa15.66■□□□□ 0.1
SSR4-211ENST00000486204 IDI2Q9BXS1 227 aa15.66■□□□□ 0.1
SSR4-211ENST00000486204 USP40Q9NVE5 1235 aa15.66■□□□□ 0.1
SSR4-211ENST00000486204 FAM198AQ9UFP1 575 aa15.66■□□□□ 0.1
SSR4-211ENST00000486204 SRRDQ9UH36 339 aa15.66■□□□□ 0.1
SSR4-211ENST00000486204 STXBP5LQ9Y2K9 1186 aa15.66■□□□□ 0.1
SSR4-211ENST00000486204 COL2A1P02458 1487 aaPredicted RBP15.65■□□□□ 0.1
SSR4-211ENST00000486204 LAMA3Q16787 3333 aa15.65■□□□□ 0.1
SSR4-211ENST00000486204 PTPRFP10586 1907 aa15.65■□□□□ 0.1
SSR4-211ENST00000486204 TCRBV5S4A2TA0A5A2 114 aa15.65■□□□□ 0.1
SSR4-211ENST00000486204 FARP2O94887 1054 aaPredicted RBP15.65■□□□□ 0.1
SSR4-211ENST00000486204 PDE1AP54750 535 aa15.65■□□□□ 0.1
SSR4-211ENST00000486204 MAP3K9P80192 1104 aa15.65■□□□□ 0.1
SSR4-211ENST00000486204 VGLL4Q14135 290 aa15.65■□□□□ 0.1
SSR4-211ENST00000486204 TMED8Q6PL24 325 aaPredicted RBP15.65■□□□□ 0.1
SSR4-211ENST00000486204 MAGEB6Q8N7X4 407 aa15.65■□□□□ 0.1
SSR4-211ENST00000486204 RAET1EQ8TD07 263 aa15.65■□□□□ 0.1
SSR4-211ENST00000486204 TRIM47Q96LD4 638 aa15.65■□□□□ 0.1
SSR4-211ENST00000486204 TMEM39BQ9GZU3 492 aa15.65■□□□□ 0.1
SSR4-211ENST00000486204 DDX4Q9NQI0 724 aaKnown RBP15.65■□□□□ 0.1
SSR4-211ENST00000486204 TMOD2Q9NZR1 351 aa15.65■□□□□ 0.1
SSR4-211ENST00000486204 GLRX3O76003 335 aaKnown RBP15.64■□□□□ 0.09
SSR4-211ENST00000486204 CHGBP05060 677 aa15.64■□□□□ 0.09
SSR4-211ENST00000486204 CETPP11597 493 aa15.64■□□□□ 0.09
SSR4-211ENST00000486204 PDE6AP16499 860 aa15.64■□□□□ 0.09
SSR4-211ENST00000486204 CYP7A1P22680 504 aa15.64■□□□□ 0.09
SSR4-211ENST00000486204 PSMC4P43686 418 aa15.64■□□□□ 0.09
SSR4-211ENST00000486204 TNNI2P48788 182 aa15.64■□□□□ 0.09
SSR4-211ENST00000486204 PPP4CP60510 307 aa15.64■□□□□ 0.09
SSR4-211ENST00000486204 ZCCHC17Q9NP64 241 aaKnown RBP15.64■□□□□ 0.09
SSR4-211ENST00000486204 AATFQ9NY61 560 aaKnown RBP eCLIP15.64■□□□□ 0.09
SSR4-211ENST00000486204 BIN2Q9UBW5 565 aaPredicted RBP15.64■□□□□ 0.09
SSR4-211ENST00000486204 ZBTB47Q9UFB7 747 aaPredicted RBP15.64■□□□□ 0.09
SSR4-211ENST00000486204 CSADQ9Y600 493 aa15.64■□□□□ 0.09
SSR4-211ENST00000486204 ATRNL1Q5VV63 1379 aa15.63■□□□□ 0.09
SSR4-211ENST00000486204 BTBD19C9JJ37 291 aa15.63■□□□□ 0.09
SSR4-211ENST00000486204 ERC2O15083 957 aa15.63■□□□□ 0.09
SSR4-211ENST00000486204 MAP4K4O95819 1239 aaPredicted RBP15.63■□□□□ 0.09
SSR4-211ENST00000486204 CTGFP29279 349 aa15.63■□□□□ 0.09
SSR4-211ENST00000486204 ADD2P35612 726 aa15.63■□□□□ 0.09
SSR4-211ENST00000486204 RGS3P49796 1198 aa15.63■□□□□ 0.09
SSR4-211ENST00000486204 UBXN2AP68543 259 aa15.63■□□□□ 0.09
SSR4-211ENST00000486204 SLFNL1Q499Z3 407 aa15.63■□□□□ 0.09
SSR4-211ENST00000486204 SLC9C2Q5TAH2 1124 aa15.63■□□□□ 0.09
SSR4-211ENST00000486204 Q7L0L9 218 aa15.63■□□□□ 0.09
SSR4-211ENST00000486204 ZFPM1Q8IX07 1006 aa15.63■□□□□ 0.09
SSR4-211ENST00000486204 SH3RF3Q8TEJ3 882 aaPredicted RBP15.63■□□□□ 0.09
SSR4-211ENST00000486204 U2AF1L4Q8WU68 220 aaKnown RBP15.63■□□□□ 0.09
SSR4-211ENST00000486204 FAM151AQ8WW52 585 aa15.63■□□□□ 0.09
SSR4-211ENST00000486204 ZSWIM8A7E2V4 1837 aa15.63■□□□□ 0.09
SSR4-211ENST00000486204 CUL9Q8IWT3 2517 aa15.63■□□□□ 0.09
SSR4-211ENST00000486204 ZNF532Q9HCE3 1301 aa15.63■□□□□ 0.09
SSR4-211ENST00000486204 ENTPD3O75355 529 aa15.62■□□□□ 0.09
SSR4-211ENST00000486204 NPM3O75607 178 aaKnown RBP15.62■□□□□ 0.09
SSR4-211ENST00000486204 FMNL1O95466 1100 aaPredicted RBP15.62■□□□□ 0.09
SSR4-211ENST00000486204 OSBPP22059 807 aa15.62■□□□□ 0.09
SSR4-211ENST00000486204 PDE4AP27815 886 aa15.62■□□□□ 0.09
SSR4-211ENST00000486204 DYNLL1P63167 89 aaKnown RBP15.62■□□□□ 0.09
SSR4-211ENST00000486204 TCP10Q12799 353 aa15.62■□□□□ 0.09
SSR4-211ENST00000486204 C17orf99Q6UX52 265 aa15.62■□□□□ 0.09
SSR4-211ENST00000486204 PLEKHM2Q8IWE5 1019 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms