RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 OSBPP22059 807 aa11.49□□□□□ -0.57
TMEM39A-208ENST00000486159 FXR1P51114 621 aaKnown RBP eCLIP11.49□□□□□ -0.57
TMEM39A-208ENST00000486159 MAP3K10Q02779 954 aa11.49□□□□□ -0.57
TMEM39A-208ENST00000486159 SHROOM1Q2M3G4 852 aaPredicted RBP11.49□□□□□ -0.57
TMEM39A-208ENST00000486159 ERICH6Q7L0X2 663 aa11.49□□□□□ -0.57
TMEM39A-208ENST00000486159 SCYL3Q8IZE3 742 aa11.49□□□□□ -0.57
TMEM39A-208ENST00000486159 SPOCK2Q92563 424 aa11.49□□□□□ -0.57
TMEM39A-208ENST00000486159 NSUN4Q96CB9 384 aaKnown RBP11.49□□□□□ -0.57
TMEM39A-208ENST00000486159 HOOK2Q96ED9 719 aa11.49□□□□□ -0.57
TMEM39A-208ENST00000486159 FAM163AQ96GL9 167 aaPredicted RBP11.49□□□□□ -0.57
TMEM39A-208ENST00000486159 GABRQQ9UN88 632 aa11.49□□□□□ -0.57
TMEM39A-208ENST00000486159 AFG3L2Q9Y4W6 797 aa11.49□□□□□ -0.57
TMEM39A-208ENST00000486159 A0A0C4DFX4 3053 aa11.48□□□□□ -0.57
TMEM39A-208ENST00000486159 BCRP11274 1271 aa11.48□□□□□ -0.57
TMEM39A-208ENST00000486159 JAG1P78504 1218 aa11.48□□□□□ -0.57
TMEM39A-208ENST00000486159 SLC4A8Q2Y0W8 1093 aa11.48□□□□□ -0.57
TMEM39A-208ENST00000486159 GADL1Q6ZQY3 521 aa11.48□□□□□ -0.57
TMEM39A-208ENST00000486159 ADGRA1Q86SQ6 560 aa11.48□□□□□ -0.57
TMEM39A-208ENST00000486159 SPATA5Q8NB90 893 aa11.48□□□□□ -0.57
TMEM39A-208ENST00000486159 DBNDD2Q9BQY9 259 aa11.48□□□□□ -0.57
TMEM39A-208ENST00000486159 ZCCHC17Q9NP64 241 aaKnown RBP11.48□□□□□ -0.57
TMEM39A-208ENST00000486159 RAI14Q9P0K7 980 aa11.48□□□□□ -0.57
TMEM39A-208ENST00000486159 AKAP2Q9Y2D5 859 aa11.48□□□□□ -0.57
TMEM39A-208ENST00000486159 PCDHB15Q9Y5E8 787 aa11.48□□□□□ -0.57
TMEM39A-208ENST00000486159 NDUFB9Q9Y6M9 179 aa11.48□□□□□ -0.57
TMEM39A-208ENST00000486159 PTPRFP10586 1907 aa11.48□□□□□ -0.57
TMEM39A-208ENST00000486159 MGAMO43451 1857 aa11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 A0A0G2JLL6 359 aaPredicted RBP11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 TRIM75PA6NK02 468 aa11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 ZBTB7BO15156 539 aaPredicted RBP11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 PEX10O60683 326 aa11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 FMNL1O95466 1100 aaPredicted RBP11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 IGHDP01880 384 aa11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 ARID4AP29374 1257 aaPredicted RBP11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 G3BP1Q13283 466 aaKnown RBP eCLIP11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 TREML2Q5T2D2 321 aa11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 GORABQ5T7V8 394 aa11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 PRRT2Q7Z6L0 340 aaPredicted RBP11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 ZGPATQ8N5A5 531 aaKnown RBP11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 SH3RF3Q8TEJ3 882 aaPredicted RBP11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 SHISA4Q96DD7 197 aa11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 TMEM106CQ9BVX2 250 aa11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 TLR7Q9NYK1 1049 aaKnown RBP11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 SRRDQ9UH36 339 aa11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 HDAC5Q9UQL6 1122 aa11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 KIAA0100Q14667 2235 aaKnown RBP11.47□□□□□ -0.57
TMEM39A-208ENST00000486159 DOCK1Q14185 1865 aa11.46□□□□□ -0.57
TMEM39A-208ENST00000486159 SIPA1L1O43166 1804 aa11.46□□□□□ -0.57
TMEM39A-208ENST00000486159 PDS5AQ29RF7 1337 aaKnown RBP11.46□□□□□ -0.57
TMEM39A-208ENST00000486159 CXCL11O14625 94 aa11.46□□□□□ -0.57
TMEM39A-208ENST00000486159 ATP8B2P98198 1209 aa11.46□□□□□ -0.57
TMEM39A-208ENST00000486159 PRKCZQ05513 592 aa11.46□□□□□ -0.57
TMEM39A-208ENST00000486159 KIF22Q14807 665 aa11.46□□□□□ -0.57
TMEM39A-208ENST00000486159 SPTY2D1Q68D10 685 aaPredicted RBP11.46□□□□□ -0.57
TMEM39A-208ENST00000486159 CCDC8Q9H0W5 538 aaPredicted RBP11.46□□□□□ -0.57
TMEM39A-208ENST00000486159 FARP1Q9Y4F1 1045 aaPredicted RBP11.46□□□□□ -0.57
TMEM39A-208ENST00000486159 MYPNQ86TC9 1320 aa11.45□□□□□ -0.58
TMEM39A-208ENST00000486159 ATAD5Q96QE3 1844 aa11.45□□□□□ -0.58
TMEM39A-208ENST00000486159 SURF6O75683 361 aaKnown RBP11.45□□□□□ -0.58
TMEM39A-208ENST00000486159 CYP2E1P05181 493 aaPredicted RBP11.45□□□□□ -0.58
TMEM39A-208ENST00000486159 TNNI3KQ59H18 835 aa11.45□□□□□ -0.58
TMEM39A-208ENST00000486159 NBPF11Q86T75 865 aa11.45□□□□□ -0.58
TMEM39A-208ENST00000486159 SSH3Q8TE77 659 aa11.45□□□□□ -0.58
TMEM39A-208ENST00000486159 OSBPL5Q9H0X9 879 aaPredicted RBP11.45□□□□□ -0.58
TMEM39A-208ENST00000486159 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.45□□□□□ -0.58
TMEM39A-208ENST00000486159 PIH1D3Q9NQM4 214 aaKnown RBP11.45□□□□□ -0.58
TMEM39A-208ENST00000486159 PICK1Q9NRD5 415 aa11.45□□□□□ -0.58
TMEM39A-208ENST00000486159 AATFQ9NY61 560 aaKnown RBP eCLIP11.45□□□□□ -0.58
TMEM39A-208ENST00000486159 FPGT-TNNI3KV9GXZ4 949 aa11.45□□□□□ -0.58
TMEM39A-208ENST00000486159 CDK5RAP2Q96SN8 1893 aa11.44□□□□□ -0.58
TMEM39A-208ENST00000486159 DOCK3Q8IZD9 2030 aa11.44□□□□□ -0.58
TMEM39A-208ENST00000486159 CTNND1O60716 968 aaKnown RBP11.44□□□□□ -0.58
TMEM39A-208ENST00000486159 ZAP70P43403 619 aa11.44□□□□□ -0.58
TMEM39A-208ENST00000486159 DYNLL1P63167 89 aaKnown RBP11.44□□□□□ -0.58
TMEM39A-208ENST00000486159 SPP2Q13103 211 aa11.44□□□□□ -0.58
TMEM39A-208ENST00000486159 ARHGEF6Q15052 776 aa11.44□□□□□ -0.58
TMEM39A-208ENST00000486159 SMC5Q8IY18 1101 aa11.44□□□□□ -0.58
TMEM39A-208ENST00000486159 TEX11Q8IYF3 940 aa11.44□□□□□ -0.58
TMEM39A-208ENST00000486159 TGFBRAP1Q8WUH2 860 aa11.44□□□□□ -0.58
TMEM39A-208ENST00000486159 EAF2Q96CJ1 260 aaPredicted RBP11.44□□□□□ -0.58
TMEM39A-208ENST00000486159 BACH2Q9BYV9 841 aa11.44□□□□□ -0.58
TMEM39A-208ENST00000486159 DNAJC18Q9H819 358 aa11.44□□□□□ -0.58
TMEM39A-208ENST00000486159 LRP2BPQ9P2M1 347 aa11.44□□□□□ -0.58
TMEM39A-208ENST00000486159 DBNLQ9UJU6 430 aaKnown RBP11.44□□□□□ -0.58
TMEM39A-208ENST00000486159 TBC1D12O60347 775 aa11.43□□□□□ -0.58
TMEM39A-208ENST00000486159 CCL5P13501 91 aa11.43□□□□□ -0.58
TMEM39A-208ENST00000486159 ELNP15502 786 aa11.43□□□□□ -0.58
TMEM39A-208ENST00000486159 PDE4AP27815 886 aa11.43□□□□□ -0.58
TMEM39A-208ENST00000486159 GRK4P32298 578 aa11.43□□□□□ -0.58
TMEM39A-208ENST00000486159 TTC39AQ5SRH9 613 aa11.43□□□□□ -0.58
TMEM39A-208ENST00000486159 MAPKAPK5Q8IW41 473 aa11.43□□□□□ -0.58
TMEM39A-208ENST00000486159 SLF2Q8IX21 1173 aa11.43□□□□□ -0.58
TMEM39A-208ENST00000486159 ANKRD13CQ8N6S4 541 aa11.43□□□□□ -0.58
TMEM39A-208ENST00000486159 RAET1EQ8TD07 263 aa11.43□□□□□ -0.58
TMEM39A-208ENST00000486159 PARK7Q99497 189 aaKnown RBP11.43□□□□□ -0.58
TMEM39A-208ENST00000486159 UNC93B1Q9H1C4 597 aa11.43□□□□□ -0.58
TMEM39A-208ENST00000486159 ANTXR1Q9H6X2 564 aa11.43□□□□□ -0.58
TMEM39A-208ENST00000486159 LDHCP07864 332 aa11.42□□□□□ -0.58
TMEM39A-208ENST00000486159 UQCRFS1P1P0C7P4 283 aa11.42□□□□□ -0.58
TMEM39A-208ENST00000486159 FLT3LGP49771 235 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms