RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 UTP4Q969X6 686 aaKnown RBP9.48□□□□□ -0.89
RTN4-214ENST00000486085 WNT10AQ9GZT5 417 aa9.48□□□□□ -0.89
RTN4-214ENST00000486085 GSX1Q9H4S2 264 aaPredicted RBP9.48□□□□□ -0.89
RTN4-214ENST00000486085 SSU72Q9NP77 194 aaKnown RBP9.48□□□□□ -0.89
RTN4-214ENST00000486085 PCDHB14Q9Y5E9 798 aa9.48□□□□□ -0.89
RTN4-214ENST00000486085 FANCGO15287 622 aa9.47□□□□□ -0.89
RTN4-214ENST00000486085 NEFMP07197 916 aa9.47□□□□□ -0.89
RTN4-214ENST00000486085 BMP3P12645 472 aa9.47□□□□□ -0.89
RTN4-214ENST00000486085 COL9A2Q14055 689 aaPredicted RBP9.47□□□□□ -0.89
RTN4-214ENST00000486085 SGO2Q562F6 1265 aa9.47□□□□□ -0.89
RTN4-214ENST00000486085 ZBTB37Q5TC79 503 aa9.47□□□□□ -0.89
RTN4-214ENST00000486085 ARMC10Q8N2F6 343 aa9.47□□□□□ -0.89
RTN4-214ENST00000486085 FBLIM1Q8WUP2 373 aa9.47□□□□□ -0.89
RTN4-214ENST00000486085 SEC16BQ96JE7 1060 aa9.47□□□□□ -0.89
RTN4-214ENST00000486085 TACC3Q9Y6A5 838 aa9.47□□□□□ -0.89
RTN4-214ENST00000486085 PGRP06401 933 aa9.46□□□□□ -0.9
RTN4-214ENST00000486085 PLCG1P19174 1290 aa9.46□□□□□ -0.9
RTN4-214ENST00000486085 RXRBP28702 533 aa9.46□□□□□ -0.9
RTN4-214ENST00000486085 SOX9P48436 509 aa9.46□□□□□ -0.9
RTN4-214ENST00000486085 PDE4BQ07343 736 aa9.46□□□□□ -0.9
RTN4-214ENST00000486085 PLA2G4EQ3MJ16 856 aa9.46□□□□□ -0.9
RTN4-214ENST00000486085 FBXW10Q5XX13 1052 aa9.46□□□□□ -0.9
RTN4-214ENST00000486085 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.46□□□□□ -0.9
RTN4-214ENST00000486085 CDC37L1Q7L3B6 337 aa9.46□□□□□ -0.9
RTN4-214ENST00000486085 REXO1Q8N1G1 1221 aaKnown RBP9.46□□□□□ -0.9
RTN4-214ENST00000486085 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.46□□□□□ -0.9
RTN4-214ENST00000486085 PPT2Q9UMR5 302 aa9.46□□□□□ -0.9
RTN4-214ENST00000486085 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.45□□□□□ -0.9
RTN4-214ENST00000486085 HTR3BO95264 441 aa9.45□□□□□ -0.9
RTN4-214ENST00000486085 NTF4P34130 210 aa9.45□□□□□ -0.9
RTN4-214ENST00000486085 UVSSAQ2YD98 709 aa9.45□□□□□ -0.9
RTN4-214ENST00000486085 CCDC81Q6ZN84 652 aa9.45□□□□□ -0.9
RTN4-214ENST00000486085 SMYD4Q8IYR2 804 aaPredicted RBP9.45□□□□□ -0.9
RTN4-214ENST00000486085 ZNF507Q8TCN5 953 aa9.45□□□□□ -0.9
RTN4-214ENST00000486085 CPLX3Q8WVH0 158 aa9.45□□□□□ -0.9
RTN4-214ENST00000486085 ISL2Q96A47 359 aa9.45□□□□□ -0.9
RTN4-214ENST00000486085 MYRFLQ96LU7 910 aa9.45□□□□□ -0.9
RTN4-214ENST00000486085 FERD3LQ96RJ6 166 aa9.45□□□□□ -0.9
RTN4-214ENST00000486085 SSBP4Q9BWG4 385 aaPredicted RBP9.45□□□□□ -0.9
RTN4-214ENST00000486085 TANGO6Q9C0B7 1094 aa9.45□□□□□ -0.9
RTN4-214ENST00000486085 KCNF1Q9H3M0 494 aa9.45□□□□□ -0.9
RTN4-214ENST00000486085 LGR6Q9HBX8 967 aa9.45□□□□□ -0.9
RTN4-214ENST00000486085 PRKAG2Q9UGJ0 569 aa9.45□□□□□ -0.9
RTN4-214ENST00000486085 ITGB2P05107 769 aa9.44□□□□□ -0.9
RTN4-214ENST00000486085 NFICP08651 508 aa9.44□□□□□ -0.9
RTN4-214ENST00000486085 UBE3DQ7Z6J8 389 aa9.44□□□□□ -0.9
RTN4-214ENST00000486085 TP53INP1Q96A56 240 aa9.44□□□□□ -0.9
RTN4-214ENST00000486085 GMLQ99445 158 aa9.44□□□□□ -0.9
RTN4-214ENST00000486085 ACSS3Q9H6R3 686 aa9.44□□□□□ -0.9
RTN4-214ENST00000486085 EHMT1Q9H9B1 1298 aa9.44□□□□□ -0.9
RTN4-214ENST00000486085 REV1Q9UBZ9 1251 aa9.44□□□□□ -0.9
RTN4-214ENST00000486085 DAGLAQ9Y4D2 1042 aa9.44□□□□□ -0.9
RTN4-214ENST00000486085 PRR36Q9H6K5 1346 aa9.43□□□□□ -0.9
RTN4-214ENST00000486085 ATE1O95260 518 aa9.43□□□□□ -0.9
RTN4-214ENST00000486085 MAP4P27816 1152 aaKnown RBP9.43□□□□□ -0.9
RTN4-214ENST00000486085 MCF2L2Q86YR7 1114 aa9.43□□□□□ -0.9
RTN4-214ENST00000486085 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.43□□□□□ -0.9
RTN4-214ENST00000486085 FAM20CQ8IXL6 584 aa9.43□□□□□ -0.9
RTN4-214ENST00000486085 SREK1Q8WXA9 508 aaKnown RBP9.43□□□□□ -0.9
RTN4-214ENST00000486085 YIPF2Q9BWQ6 316 aa9.43□□□□□ -0.9
RTN4-214ENST00000486085 FBRSQ9HAH7 460 aa9.43□□□□□ -0.9
RTN4-214ENST00000486085 PPP1R1BQ9UD71 204 aaPredicted RBP9.43□□□□□ -0.9
RTN4-214ENST00000486085 PCOLCE2Q9UKZ9 415 aa9.43□□□□□ -0.9
RTN4-214ENST00000486085 DHX15O43143 795 aaKnown RBP9.42□□□□□ -0.9
RTN4-214ENST00000486085 SSBP05455 408 aaKnown RBP eCLIP9.42□□□□□ -0.9
RTN4-214ENST00000486085 HID1Q8IV36 788 aa9.42□□□□□ -0.9
RTN4-214ENST00000486085 ACSF2Q96CM8 615 aaPredicted RBP9.42□□□□□ -0.9
RTN4-214ENST00000486085 SRRTQ9BXP5 876 aaKnown RBP9.42□□□□□ -0.9
RTN4-214ENST00000486085 SEMA6CQ9H3T2 930 aa9.42□□□□□ -0.9
RTN4-214ENST00000486085 TJP2Q9UDY2 1190 aa9.42□□□□□ -0.9
RTN4-214ENST00000486085 FGRP09769 529 aa9.41□□□□□ -0.9
RTN4-214ENST00000486085 MLECQ14165 292 aa9.41□□□□□ -0.9
RTN4-214ENST00000486085 NFKBIBQ15653 356 aa9.41□□□□□ -0.9
RTN4-214ENST00000486085 KCT2Q8NC54 265 aa9.41□□□□□ -0.9
RTN4-214ENST00000486085 CRBNQ96SW2 442 aa9.41□□□□□ -0.9
RTN4-214ENST00000486085 KLHL3Q9UH77 587 aa9.41□□□□□ -0.9
RTN4-214ENST00000486085 ADAM30Q9UKF2 790 aa9.41□□□□□ -0.9
RTN4-214ENST00000486085 FAM95CA0A1B0GW59 222 aa9.4□□□□□ -0.9
RTN4-214ENST00000486085 UPK3BL1B0FP48 263 aa9.4□□□□□ -0.9
RTN4-214ENST00000486085 UPK3BL2E5RIL1 263 aa9.4□□□□□ -0.9
RTN4-214ENST00000486085 ATP2B1P20020 1258 aa9.4□□□□□ -0.9
RTN4-214ENST00000486085 MAP7Q14244 749 aa9.4□□□□□ -0.9
RTN4-214ENST00000486085 SF3A1Q15459 793 aaKnown RBP9.4□□□□□ -0.9
RTN4-214ENST00000486085 NKG7Q16617 165 aa9.4□□□□□ -0.9
RTN4-214ENST00000486085 TMEM201Q5SNT2 666 aa9.4□□□□□ -0.9
RTN4-214ENST00000486085 BEND4Q6ZU67 534 aa9.4□□□□□ -0.9
RTN4-214ENST00000486085 EZH1Q92800 747 aaPredicted RBP9.4□□□□□ -0.9
RTN4-214ENST00000486085 ANTXR1Q9H6X2 564 aa9.4□□□□□ -0.9
RTN4-214ENST00000486085 ZNRF3Q9ULT6 936 aa9.4□□□□□ -0.9
RTN4-214ENST00000486085 MRVI1Q9Y6F6 885 aa9.4□□□□□ -0.9
RTN4-214ENST00000486085 SLC22A31A6NKX4 558 aa9.39□□□□□ -0.91
RTN4-214ENST00000486085 CHURC1-FNTBB4DL54 471 aa9.39□□□□□ -0.91
RTN4-214ENST00000486085 IMPDH2P12268 514 aa9.39□□□□□ -0.91
RTN4-214ENST00000486085 EIF6P56537 245 aaKnown RBP9.39□□□□□ -0.91
RTN4-214ENST00000486085 SLBPQ14493 270 aaKnown RBP eCLIP9.39□□□□□ -0.91
RTN4-214ENST00000486085 MCATQ8IVS2 390 aaKnown RBP9.39□□□□□ -0.91
RTN4-214ENST00000486085 FAM13CQ8NE31 585 aa9.39□□□□□ -0.91
RTN4-214ENST00000486085 ANAPC16Q96DE5 110 aa9.39□□□□□ -0.91
RTN4-214ENST00000486085 TMEM87BQ96K49 555 aa9.39□□□□□ -0.91
RTN4-214ENST00000486085 DRC1Q96MC2 740 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms