RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 HPS5Q9UPZ3 1129 aa21.43■■□□□ 1.02
COL6A1-204ENST00000486023 KCNH4Q9UQ05 1017 aa21.43■■□□□ 1.02
COL6A1-204ENST00000486023 PCDHB15Q9Y5E8 787 aa21.43■■□□□ 1.02
COL6A1-204ENST00000486023 MAGEB6P1A0A0J9YX57 407 aa21.42■■□□□ 1.02
COL6A1-204ENST00000486023 CXCL11O14625 94 aa21.42■■□□□ 1.02
COL6A1-204ENST00000486023 PAG1Q9NWQ8 432 aa21.42■■□□□ 1.02
COL6A1-204ENST00000486023 ZNF532Q9HCE3 1301 aa21.41■■□□□ 1.02
COL6A1-204ENST00000486023 IGSF3O75054 1194 aa21.41■■□□□ 1.02
COL6A1-204ENST00000486023 PDE6AP16499 860 aa21.41■■□□□ 1.02
COL6A1-204ENST00000486023 ATP5JP18859 108 aa21.41■■□□□ 1.02
COL6A1-204ENST00000486023 RRP1BQ14684 758 aaKnown RBP21.41■■□□□ 1.02
COL6A1-204ENST00000486023 OTOP1Q7RTM1 612 aa21.41■■□□□ 1.02
COL6A1-204ENST00000486023 ANKRD23Q86SG2 305 aa21.41■■□□□ 1.02
COL6A1-204ENST00000486023 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.41■■□□□ 1.02
COL6A1-204ENST00000486023 DCTPP1Q9H773 170 aa21.41■■□□□ 1.02
COL6A1-204ENST00000486023 EFCC1Q9HA90 598 aa21.41■■□□□ 1.02
COL6A1-204ENST00000486023 CPA4Q9UI42 421 aa21.41■■□□□ 1.02
COL6A1-204ENST00000486023 AFG3L2Q9Y4W6 797 aa21.41■■□□□ 1.02
COL6A1-204ENST00000486023 HLA-DOAP06340 250 aa21.4■■□□□ 1.02
COL6A1-204ENST00000486023 SOX10P56693 466 aa21.4■■□□□ 1.02
COL6A1-204ENST00000486023 SLFNL1Q499Z3 407 aa21.4■■□□□ 1.02
COL6A1-204ENST00000486023 FBXO46Q6PJ61 603 aaPredicted RBP21.4■■□□□ 1.02
COL6A1-204ENST00000486023 HERC5Q9UII4 1024 aaKnown RBP21.4■■□□□ 1.02
COL6A1-204ENST00000486023 TLR2O60603 784 aa21.39■■□□□ 1.01
COL6A1-204ENST00000486023 GDF11O95390 407 aa21.39■■□□□ 1.01
COL6A1-204ENST00000486023 CYP2C8P10632 490 aa21.39■■□□□ 1.01
COL6A1-204ENST00000486023 CAP2P40123 477 aa21.39■■□□□ 1.01
COL6A1-204ENST00000486023 SPP2Q13103 211 aa21.39■■□□□ 1.01
COL6A1-204ENST00000486023 TSHZ3Q63HK5 1081 aa21.39■■□□□ 1.01
COL6A1-204ENST00000486023 FASTKD5Q7L8L6 764 aaKnown RBP21.39■■□□□ 1.01
COL6A1-204ENST00000486023 FOXP4Q8IVH2 680 aaPredicted RBP21.39■■□□□ 1.01
COL6A1-204ENST00000486023 MOGSQ13724 837 aa21.38■■□□□ 1.01
COL6A1-204ENST00000486023 GPAT2Q6NUI2 795 aa21.38■■□□□ 1.01
COL6A1-204ENST00000486023 HAUS7Q99871 368 aa21.38■■□□□ 1.01
COL6A1-204ENST00000486023 ECHDC1Q9NTX5 307 aa21.38■■□□□ 1.01
COL6A1-204ENST00000486023 DOCK2Q92608 1830 aa21.37■■□□□ 1.01
COL6A1-204ENST00000486023 A0A0G2JLL6 359 aaPredicted RBP21.37■■□□□ 1.01
COL6A1-204ENST00000486023 POLR3DP05423 398 aaPredicted RBP21.37■■□□□ 1.01
COL6A1-204ENST00000486023 CAP1Q01518 475 aa21.37■■□□□ 1.01
COL6A1-204ENST00000486023 KIF22Q14807 665 aa21.37■■□□□ 1.01
COL6A1-204ENST00000486023 PRRT2Q7Z6L0 340 aaPredicted RBP21.37■■□□□ 1.01
COL6A1-204ENST00000486023 CERS3Q8IU89 383 aa21.37■■□□□ 1.01
COL6A1-204ENST00000486023 RIOK1Q9BRS2 568 aaKnown RBP21.37■■□□□ 1.01
COL6A1-204ENST00000486023 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.37■■□□□ 1.01
COL6A1-204ENST00000486023 ARMT1Q9H993 441 aa21.37■■□□□ 1.01
COL6A1-204ENST00000486023 ZCCHC17Q9NP64 241 aaKnown RBP21.37■■□□□ 1.01
COL6A1-204ENST00000486023 CHGBP05060 677 aa21.36■■□□□ 1.01
COL6A1-204ENST00000486023 ARHGEF6Q15052 776 aa21.36■■□□□ 1.01
COL6A1-204ENST00000486023 SHROOM1Q2M3G4 852 aaPredicted RBP21.36■■□□□ 1.01
COL6A1-204ENST00000486023 ZNF280CQ8ND82 737 aa21.36■■□□□ 1.01
COL6A1-204ENST00000486023 GPATCH3Q96I76 525 aa21.36■■□□□ 1.01
COL6A1-204ENST00000486023 CRNKL1Q9BZJ0 848 aaKnown RBP21.36■■□□□ 1.01
COL6A1-204ENST00000486023 ARHGAP39Q9C0H5 1083 aa21.36■■□□□ 1.01
COL6A1-204ENST00000486023 MYO5AQ9Y4I1 1855 aaKnown RBP21.36■■□□□ 1.01
COL6A1-204ENST00000486023 MAST2Q6P0Q8 1798 aa21.36■■□□□ 1.01
COL6A1-204ENST00000486023 COL2A1P02458 1487 aaPredicted RBP21.35■■□□□ 1.01
COL6A1-204ENST00000486023 USP17L5A8MUK1 530 aa21.35■■□□□ 1.01
COL6A1-204ENST00000486023 JAG1P78504 1218 aa21.35■■□□□ 1.01
COL6A1-204ENST00000486023 LCORLQ8N3X6 602 aa21.35■■□□□ 1.01
COL6A1-204ENST00000486023 SDR42E1Q8WUS8 393 aa21.35■■□□□ 1.01
COL6A1-204ENST00000486023 PARK7Q99497 189 aaKnown RBP21.35■■□□□ 1.01
COL6A1-204ENST00000486023 DNAJC18Q9H819 358 aa21.35■■□□□ 1.01
COL6A1-204ENST00000486023 ZBTB47Q9UFB7 747 aaPredicted RBP21.35■■□□□ 1.01
COL6A1-204ENST00000486023 PTPN22Q9Y2R2 807 aa21.35■■□□□ 1.01
COL6A1-204ENST00000486023 TCRBV5S4A2TA0A5A2 114 aa21.34■■□□□ 1.01
COL6A1-204ENST00000486023 HMGCS2P54868 508 aa21.34■■□□□ 1.01
COL6A1-204ENST00000486023 TMED8Q6PL24 325 aaPredicted RBP21.34■■□□□ 1.01
COL6A1-204ENST00000486023 C17orf99Q6UX52 265 aa21.34■■□□□ 1.01
COL6A1-204ENST00000486023 TTC6Q86TZ1 520 aa21.34■■□□□ 1.01
COL6A1-204ENST00000486023 AS3MTQ9HBK9 375 aa21.34■■□□□ 1.01
COL6A1-204ENST00000486023 MCM9Q9NXL9 1143 aa21.34■■□□□ 1.01
COL6A1-204ENST00000486023 MBD4O95243 580 aa21.33■■□□□ 1.01
COL6A1-204ENST00000486023 ADD2P35612 726 aa21.33■■□□□ 1.01
COL6A1-204ENST00000486023 PLCD1P51178 756 aa21.33■■□□□ 1.01
COL6A1-204ENST00000486023 LACTBP83111 547 aaPredicted RBP21.33■■□□□ 1.01
COL6A1-204ENST00000486023 TREML2Q5T2D2 321 aa21.33■■□□□ 1.01
COL6A1-204ENST00000486023 PRKAB2O43741 272 aa21.32■■□□□ 1
COL6A1-204ENST00000486023 FMNL1O95466 1100 aaPredicted RBP21.32■■□□□ 1
COL6A1-204ENST00000486023 ASNSP08243 561 aa21.32■■□□□ 1
COL6A1-204ENST00000486023 SMCR8Q8TEV9 937 aaPredicted RBP21.32■■□□□ 1
COL6A1-204ENST00000486023 SERPINB13Q9UIV8 391 aa21.32■■□□□ 1
COL6A1-204ENST00000486023 MYCP01106 439 aaPredicted RBP21.31■■□□□ 1
COL6A1-204ENST00000486023 GH2P01242 217 aa21.31■■□□□ 1
COL6A1-204ENST00000486023 PSMC4P43686 418 aa21.31■■□□□ 1
COL6A1-204ENST00000486023 MLLT1Q03111 559 aaPredicted RBP21.31■■□□□ 1
COL6A1-204ENST00000486023 MTMR2Q13614 643 aa21.31■■□□□ 1
COL6A1-204ENST00000486023 ANKRD45Q5TZF3 282 aa21.31■■□□□ 1
COL6A1-204ENST00000486023 ZSCAN25Q6NSZ9 544 aa21.31■■□□□ 1
COL6A1-204ENST00000486023 METTL16Q86W50 562 aaKnown RBP21.31■■□□□ 1
COL6A1-204ENST00000486023 AGTPBP1Q9UPW5 1226 aa21.31■■□□□ 1
COL6A1-204ENST00000486023 CYP2D6P10635 497 aa21.3■■□□□ 1
COL6A1-204ENST00000486023 EVX2Q03828 476 aa21.3■■□□□ 1
COL6A1-204ENST00000486023 RAB3GAP1Q15042 981 aa21.3■■□□□ 1
COL6A1-204ENST00000486023 CERKLQ49MI3 558 aaPredicted RBP21.3■■□□□ 1
COL6A1-204ENST00000486023 OTUD7AQ8TE49 926 aaPredicted RBP21.3■■□□□ 1
COL6A1-204ENST00000486023 ZBTB21Q9ULJ3 1066 aa21.3■■□□□ 1
COL6A1-204ENST00000486023 PTCH2Q9Y6C5 1203 aa21.3■■□□□ 1
COL6A1-204ENST00000486023 TBC1D2Q9BYX2 928 aa21.29■■□□□ 1
COL6A1-204ENST00000486023 DCP1AQ9NPI6 582 aaPredicted RBP21.29■■□□□ 1
COL6A1-204ENST00000486023 TMOD4Q9NZQ9 345 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms